FFCP PHASE1:Hg19::chr17:38613285..38613298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38613285..38613298,- | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613285..38613298,- | |description=CAGE_peak_at_chr17:38613285..38613298,- | ||
|id=chr17:38613285..38613298,- | |id=chr17:38613285..38613298,- | ||
|ontology_enrichment_celltype=CL:0000055!2.49e-14!180;CL:0002371!7.85e-11!591;CL:0000183!2.89e-10!59;CL:0000057!4.21e-10!75;CL:0002334!9.15e-10!12;CL:0000144!1.46e-09!625;CL:0000548!1.05e-08!679;CL:0000004!1.05e-08!679;CL:0000255!1.05e-08!679;CL:0000680!1.65e-08!57;CL:0000056!1.65e-08!57;CL:0000355!1.65e-08!57;CL:0000012!1.77e-08!682;CL:0000630!2.64e-08!9;CL:0000048!3.24e-08!430;CL:0000723!9.85e-08!436;CL:0000187!1.46e-07!54;CL:0000034!1.98e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.49e-14!180;CL:0002371!7.85e-11!591;CL:0000183!2.89e-10!59;CL:0000057!4.21e-10!75;CL:0002334!9.15e-10!12;CL:0000144!1.46e-09!625;CL:0000548!1.05e-08!679;CL:0000004!1.05e-08!679;CL:0000255!1.05e-08!679;CL:0000680!1.65e-08!57;CL:0000056!1.65e-08!57;CL:0000355!1.65e-08!57;CL:0000012!1.77e-08!682;CL:0000630!2.64e-08!9;CL:0000048!3.24e-08!430;CL:0000723!9.85e-08!436;CL:0000187!1.46e-07!54;CL:0000034!1.98e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002564;5.24e-20;3!CL:0000135;5.59e-20;3!CL:0000388;5.59e-20;3!CL:0000499;1.57e-13;28!CL:0002593;2.54e-13;2!CL:0000153;9.34e-12;9!CL:0000447;9.34e-12;9!CL:0000327;1.51e-10;15!CL:0000214;8.36e-10;3!CL:0002581;1.68e-07;1!CL:0002616;1.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.77e-20,3;CL:0000388,2.77e-20,3;CL:0002564,4.94e-20,3;CL:0000499,1.29e-13,28;CL:0002593,3.71e-13,2;CL:0000153,1.09e-11,9;CL:0000447,1.09e-11,9;CL:0000327,1.50e-10,15;CL:0000214,8.75e-10,3;CL:0002616,9.44e-08,1;CL:0002581,1.01e-07,1;CL:0000136,7.56e-07,15;CL:0002320,8.34e-07,361 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.68e-07;1!UBERON:0003852;1.68e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.29e-09!143;UBERON:0000914!4.65e-08!83;UBERON:0002329!4.65e-08!83;UBERON:0003077!4.65e-08!83;UBERON:0003059!4.65e-08!83;UBERON:0007282!4.65e-08!83;UBERON:0009618!4.65e-08!83;UBERON:0007285!4.65e-08!83;UBERON:0001134!1.81e-07!61;UBERON:0002036!1.81e-07!61;UBERON:0003082!1.81e-07!61;UBERON:0002100!2.71e-07!216;UBERON:0002385!5.25e-07!63;UBERON:0001015!5.25e-07!63;UBERON:0000383!5.25e-07!63;UBERON:0003688!6.07e-07!6;UBERON:0002358!6.07e-07!6;UBERON:0003684!6.07e-07!6;UBERON:0001178!6.07e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.81e-29;8!UBERON:0000982;6.81e-29;8!UBERON:0004770;6.81e-29;8!UBERON:0011135;5.24e-21;5!UBERON:0002216;5.24e-21;5!UBERON:0011134;5.24e-21;5!UBERON:0002209;5.24e-21;5!UBERON:0002213;5.24e-21;5!UBERON:0007844;5.24e-21;5!UBERON:0011138;5.24e-21;5!UBERON:0001130;5.24e-21;5!UBERON:0001066;5.24e-21;5!UBERON:0001468;5.24e-21;5!UBERON:0002242;5.24e-20;3!UBERON:0007846;5.59e-20;3!UBERON:0000043;5.59e-20;3!UBERON:0007845;5.59e-20;3!UBERON:0000075;9.81e-19;16!UBERON:0005406;2.54e-13;2!UBERON:0002456;2.54e-13;2!UBERON:0006915;8.36e-10;3!UBERON:0007616;8.36e-10;3!UBERON:0002217;8.36e-10;3!UBERON:0002018;8.36e-10;3!UBERON:0001434;3.76e-09;36!UBERON:0005705;1.68e-07;1!UBERON:0008193;1.68e-07;1!UBERON:0010912;1.68e-07;1!UBERON:0002514;1.68e-07;1!UBERON:0003457;1.68e-07;1!UBERON:0008907;1.68e-07;1!UBERON:0008001;1.68e-07;1!UBERON:0007213;1.68e-07;1!UBERON:0009891;1.68e-07;1!UBERON:0007914;1.68e-07;1!UBERON:0007375;1.68e-07;1!UBERON:0003323;1.68e-07;1!UBERON:0010258;1.68e-07;1!UBERON:0005253;1.68e-07;1!UBERON:0007842;1.68e-07;1!UBERON:0002397;1.68e-07;1!UBERON:0003113;1.68e-07;1!UBERON:0003277;1.68e-07;1!UBERON:0001709;1.68e-07;1!UBERON:0002244;1.68e-07;1!UBERON:0005620;1.68e-07;1!UBERON:0010364;1.68e-07;1!UBERON:0004288;1.68e-07;1!UBERON:0001013;2.46e-07;14!UBERON:0004457;3.65e-07;9!UBERON:0000042;3.65e-07;9!UBERON:0002204;7.32e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.39e-29,8;UBERON:0000982,6.39e-29,8;UBERON:0004770,6.39e-29,8;UBERON:0011135,4.64e-21,5;UBERON:0002216,4.64e-21,5;UBERON:0011134,4.64e-21,5;UBERON:0002209,4.64e-21,5;UBERON:0002213,4.64e-21,5;UBERON:0005856,4.64e-21,5;UBERON:0005866,4.64e-21,5;UBERON:0005863,4.64e-21,5;UBERON:0007844,4.64e-21,5;UBERON:0011138,4.64e-21,5;UBERON:0001130,4.64e-21,5;UBERON:0001066,4.64e-21,5;UBERON:0001468,4.64e-21,5;UBERON:0007846,2.77e-20,3;UBERON:0000043,2.77e-20,3;UBERON:0007845,2.77e-20,3;UBERON:0002242,4.94e-20,3;UBERON:0003068,4.94e-20,3;UBERON:0002328,4.94e-20,3;UBERON:0004880,4.94e-20,3;UBERON:0000075,1.00e-18,16;UBERON:0011137,7.75e-16,14;UBERON:0005406,8.65e-14,2;UBERON:0002456,3.71e-13,2;UBERON:0006915,8.75e-10,3;UBERON:0007616,8.75e-10,3;UBERON:0002217,8.75e-10,3;UBERON:0002018,8.75e-10,3;UBERON:0005705,1.22e-07,1;UBERON:0008193,1.22e-07,1;UBERON:0010912,1.22e-07,1;UBERON:0002514,1.22e-07,1;UBERON:0003457,1.22e-07,1;UBERON:0008907,1.22e-07,1;UBERON:0008001,1.22e-07,1;UBERON:0007213,1.22e-07,1;UBERON:0009891,1.22e-07,1;UBERON:0007914,1.22e-07,1;UBERON:0009292,1.22e-07,1;UBERON:0003099,1.22e-07,1;UBERON:0007375,1.22e-07,1;UBERON:0003323,1.22e-07,1;UBERON:0010258,1.22e-07,1;UBERON:0007842,1.22e-07,1;UBERON:0009494,1.22e-07,1;UBERON:0010042,1.22e-07,1;UBERON:0010045,1.22e-07,1;UBERON:0010259,1.22e-07,1;UBERON:0010359,1.22e-07,1;UBERON:0009526,1.22e-07,1;UBERON:0002397,1.22e-07,1;UBERON:0003113,1.22e-07,1;UBERON:0003277,1.22e-07,1;UBERON:0001709,1.22e-07,1;UBERON:0004066,1.22e-07,1;UBERON:0002244,1.22e-07,1;UBERON:0005620,1.22e-07,1;UBERON:0004362,1.22e-07,1;UBERON:0010364,1.22e-07,1;UBERON:0010046,1.22e-07,1;UBERON:0005868,1.22e-07,1;UBERON:0007238,1.22e-07,1;UBERON:0004288,1.22e-07,1;UBERON:0004068,1.22e-07,1;UBERON:0010334,1.22e-07,1;UBERON:0003852,1.22e-07,1;UBERON:0010253,1.22e-07,1;UBERON:0001013,2.17e-07,14 | |||
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| ||
|short_description=p@chr17:38613285..38613298,- | |short_description=p@chr17:38613285..38613298,- | ||
}} | }} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38613285..38613298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613285..38613298, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.77e-20 | 3 |
tendon cell | 2.77e-20 | 3 |
nucleus pulposus cell of intervertebral disc | 4.94e-20 | 3 |
stromal cell | 1.29e-13 | 28 |
smooth muscle cell of the internal thoracic artery | 3.71e-13 | 2 |
GAG secreting cell | 1.09e-11 | 9 |
carbohydrate secreting cell | 1.09e-11 | 9 |
extracellular matrix secreting cell | 1.50e-10 | 15 |
synovial cell | 8.75e-10 | 3 |
perirenal adipocyte cell | 9.44e-08 | 1 |
perirenal preadipocyte | 1.01e-07 | 1 |
fat cell | 7.56e-07 | 15 |
connective tissue cell | 8.34e-07 | 361 |