FFCP PHASE1:Hg19::chr17:63534783..63534784,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:63534783..63534784,-
|short_description=p@chr17:63534783..63534784,-
|description=CAGE_peak_at_chr17:63534783..63534784,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:63534783..63534784,- | |||
|coexpression_cluster_id=C2429 | |||
|description=CAGE_peak_at_chr17:63534783..63534784,- | |||
|id=chr17:63534783..63534784,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.10e-09;7!CL:0000586;3.10e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.11e-09,7;CL:0000586,3.11e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.39e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-23!115;UBERON:0001049!5.29e-18!57;UBERON:0005068!5.29e-18!57;UBERON:0006241!5.29e-18!57;UBERON:0007135!5.29e-18!57;UBERON:0001017!1.98e-16!82;UBERON:0002780!2.88e-16!41;UBERON:0001890!2.88e-16!41;UBERON:0006240!2.88e-16!41;UBERON:0005743!5.10e-16!86;UBERON:0003080!1.72e-15!42;UBERON:0000073!3.05e-15!94;UBERON:0001016!3.05e-15!94;UBERON:0001893!1.00e-14!34;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0002020!1.75e-14!34;UBERON:0003528!1.75e-14!34;UBERON:0001869!2.39e-14!32;UBERON:0002791!2.49e-14!33;UBERON:0002346!2.90e-14!90;UBERON:0002616!4.50e-14!59;UBERON:0003075!5.14e-14!86;UBERON:0007284!5.14e-14!86;UBERON:0000956!8.52e-14!25;UBERON:0000203!8.52e-14!25;UBERON:0002619!4.60e-13!22;UBERON:0001950!1.03e-11!20;UBERON:0003056!4.49e-10!61;UBERON:0000153!3.72e-09!129;UBERON:0007811!3.72e-09!129;UBERON:0000033!3.07e-08!123;UBERON:0000924!1.05e-07!173;UBERON:0006601!1.05e-07!173;UBERON:0004121!2.05e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.21e-15;22!UBERON:0000956;6.83e-13;25!UBERON:0000203;6.83e-13;25!UBERON:0001950;1.93e-12;20!UBERON:0002791;1.07e-11;32!UBERON:0001869;1.14e-11;32!UBERON:0001893;1.39e-11;34!UBERON:0003528;1.96e-10;34!UBERON:0002020;1.96e-10;34!UBERON:0002780;3.82e-10;41!UBERON:0001890;3.82e-10;41!UBERON:0000073;6.67e-08;53!UBERON:0002616;6.67e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.10e-14,22;UBERON:0000956,1.56e-12,25;UBERON:0000203,1.56e-12,25;UBERON:0001893,2.76e-12,34;UBERON:0002780,4.16e-12,41;UBERON:0001890,4.16e-12,41;UBERON:0003080,4.16e-12,41;UBERON:0006240,4.16e-12,41;UBERON:0001049,4.43e-12,56;UBERON:0005068,4.43e-12,56;UBERON:0006241,4.43e-12,56;UBERON:0007135,4.43e-12,56;UBERON:0001950,6.03e-12,20;UBERON:0002791,7.39e-12,32;UBERON:0001869,7.39e-12,32;UBERON:0000073,1.09e-11,53;UBERON:0002616,1.09e-11,53;UBERON:0001017,6.03e-11,81;UBERON:0003528,6.29e-11,34;UBERON:0002020,6.29e-11,34;UBERON:0001016,8.14e-11,89;UBERON:0000955,8.67e-11,68;UBERON:0006238,8.67e-11,68;UBERON:0007023,9.17e-11,114;UBERON:0011216,6.56e-10,223;UBERON:0002346,9.70e-09,86;UBERON:0003075,1.08e-08,82;UBERON:0007284,1.08e-08,82;UBERON:0003056,2.76e-08,61 | |||
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| ||
|short_description=p@chr17:63534783..63534784,- | |||
}} | }} |
Latest revision as of 19:59, 25 July 2015
Short description: | p@chr17:63534783..63534784, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63534783..63534784, - |
Coexpression cluster: | C2429_alveolar_synovial_gastric_signet_hepatoblastoma_small_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.11e-09 | 7 |
germ cell | 3.11e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.10e-14 | 22 |
cerebral cortex | 1.56e-12 | 25 |
pallium | 1.56e-12 | 25 |
telencephalon | 2.76e-12 | 34 |
regional part of forebrain | 4.16e-12 | 41 |
forebrain | 4.16e-12 | 41 |
anterior neural tube | 4.16e-12 | 41 |
future forebrain | 4.16e-12 | 41 |
neural tube | 4.43e-12 | 56 |
neural rod | 4.43e-12 | 56 |
future spinal cord | 4.43e-12 | 56 |
neural keel | 4.43e-12 | 56 |
neocortex | 6.03e-12 | 20 |
regional part of telencephalon | 7.39e-12 | 32 |
cerebral hemisphere | 7.39e-12 | 32 |
regional part of nervous system | 1.09e-11 | 53 |
regional part of brain | 1.09e-11 | 53 |
central nervous system | 6.03e-11 | 81 |
brain grey matter | 6.29e-11 | 34 |
gray matter | 6.29e-11 | 34 |
nervous system | 8.14e-11 | 89 |
brain | 8.67e-11 | 68 |
future brain | 8.67e-11 | 68 |
adult organism | 9.17e-11 | 114 |
organ system subdivision | 6.56e-10 | 223 |
neurectoderm | 9.70e-09 | 86 |
neural plate | 1.08e-08 | 82 |
presumptive neural plate | 1.08e-08 | 82 |
pre-chordal neural plate | 2.76e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.56e-08 | 14 |