FFCP PHASE1:Hg19::chr17:77019002..77019027,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77019002..77019027,+ | |||
|coexpression_cluster_id=C1794 | |||
|description=CAGE_peak_at_chr17:77019002..77019027,+ | |description=CAGE_peak_at_chr17:77019002..77019027,+ | ||
|id=chr17:77019002..77019027,+ | |id=chr17:77019002..77019027,+ | ||
|ontology_enrichment_celltype=CL:0002494!7.72e-28!16;CL:0002548!6.26e-11!6;CL:0000136!1.94e-08!15;CL:0000569!2.21e-08!4;CL:0000011!2.21e-08!4;CL:0000359!8.66e-08!32;CL:0000746!4.72e-07!3;CL:0000513!4.72e-07!3 | |ontology_enrichment_celltype=CL:0002494!7.72e-28!16;CL:0002548!6.26e-11!6;CL:0000136!1.94e-08!15;CL:0000569!2.21e-08!4;CL:0000011!2.21e-08!4;CL:0000359!8.66e-08!32;CL:0000746!4.72e-07!3;CL:0000513!4.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.54e-42;16!CL:0000569;4.29e-15;4!CL:0000746;1.75e-12;3!CL:0000136;3.52e-12;13!CL:0002592;2.17e-11;3!CL:0002548;3.42e-10;6!CL:0000737;1.84e-09;4!CL:0002195;1.15e-08;2!CL:0002571;1.15e-08;2!CL:0002617;9.20e-08;2!CL:0000359;3.30e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.62e-42,16;CL:0000569,4.71e-15,4;CL:0000011,4.71e-15,4;CL:0000746,1.96e-12,3;CL:0000513,1.96e-12,3;CL:0002592,3.10e-11,3;CL:0000136,1.89e-10,15;CL:0002548,3.51e-10,6;CL:0000737,2.01e-09,4;CL:0002195,1.15e-08,2;CL:0002571,1.15e-08,2;CL:0002617,8.58e-08,2;CL:0000359,1.44e-07,32;CL:0000187,4.38e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000011;4.29e-15;4!CL:0000513;1.75e-12;3!UBERON:0005062;4.07e-09;4!UBERON:0007284;4.07e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.50e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.70e-47!27;UBERON:0000948!8.59e-42!24;UBERON:0005498!8.59e-42!24;UBERON:0004140!8.59e-42!24;UBERON:0009881!8.59e-42!24;UBERON:0004141!8.59e-42!24;UBERON:0003084!8.59e-42!24;UBERON:0007005!8.59e-42!24;UBERON:0004139!8.59e-42!24;UBERON:0004291!8.59e-42!24;UBERON:0007023!1.16e-22!115;UBERON:0004872!1.55e-21!84;UBERON:0003103!5.92e-21!69;UBERON:0003914!3.52e-19!118;UBERON:0001009!2.13e-18!113;UBERON:0004535!1.46e-15!110;UBERON:0000025!6.60e-14!194;UBERON:0004111!8.43e-13!241;UBERON:0000477!1.32e-11!286;UBERON:0001048!4.28e-10!168;UBERON:0003498!1.01e-09!5;UBERON:0005985!1.01e-09!5;UBERON:0000481!8.08e-09!347;UBERON:0000483!7.26e-08!309;UBERON:0001981!8.14e-08!60;UBERON:0007500!8.14e-08!60;UBERON:0004537!8.14e-08!60;UBERON:0006965!8.14e-08!60;UBERON:0000119!1.21e-07!312;UBERON:0004573!2.29e-07!33;UBERON:0004571!2.29e-07!33;UBERON:0004151!3.60e-07!3;UBERON:0001637!4.61e-07!42;UBERON:0003509!4.61e-07!42;UBERON:0004572!4.61e-07!42;UBERON:0002385!4.92e-07!63;UBERON:0001015!4.92e-07!63;UBERON:0000383!4.92e-07!63;UBERON:0000055!6.43e-07!69;UBERON:0003978!7.61e-07!3;UBERON:0009751!7.61e-07!3;UBERON:0000946!7.61e-07!3;UBERON:0002523!7.61e-07!3;UBERON:0005983!7.61e-07!3;UBERON:0002165!7.61e-07!3;UBERON:0002062!7.61e-07!3;UBERON:0007280!7.61e-07!3;UBERON:0004145!8.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.39e-74;25!UBERON:0000948;2.16e-63;22!UBERON:0004151;1.20e-12;3!UBERON:0003103;2.75e-12;61!UBERON:0003978;5.10e-12;3!UBERON:0000946;5.10e-12;3!UBERON:0003498;2.17e-11;3!UBERON:0005985;2.17e-11;3!UBERON:0001621;2.17e-11;3!UBERON:0010313;4.27e-09;10!UBERON:0002081;5.06e-09;2!UBERON:0002133;5.36e-09;2!UBERON:0000078;3.31e-08;2!UBERON:0002012;3.31e-08;2!UBERON:0008886;3.31e-08;2!UBERON:0004535;4.21e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.69e-81,27;UBERON:0000948,9.65e-70,24;UBERON:0005498,9.65e-70,24;UBERON:0004140,9.65e-70,24;UBERON:0009881,9.65e-70,24;UBERON:0004141,9.65e-70,24;UBERON:0003084,9.65e-70,24;UBERON:0007005,9.65e-70,24;UBERON:0004139,9.65e-70,24;UBERON:0004291,9.65e-70,24;UBERON:0003103,7.80e-31,68;UBERON:0004872,8.83e-28,83;UBERON:0003914,2.41e-24,117;UBERON:0001009,3.33e-24,112;UBERON:0004535,1.75e-19,109;UBERON:0003498,1.05e-17,5;UBERON:0005985,1.05e-17,5;UBERON:0000025,1.20e-13,192;UBERON:0001048,2.60e-13,160;UBERON:0004151,1.15e-12,3;UBERON:0010314,3.84e-12,132;UBERON:0003978,5.02e-12,3;UBERON:0009751,5.02e-12,3;UBERON:0000946,5.02e-12,3;UBERON:0002523,5.02e-12,3;UBERON:0005983,5.02e-12,3;UBERON:0002165,5.02e-12,3;UBERON:0002062,5.02e-12,3;UBERON:0007280,5.02e-12,3;UBERON:0004111,5.12e-12,240;UBERON:0004145,6.50e-12,3;UBERON:0001621,3.10e-11,3;UBERON:0003081,9.63e-11,203;UBERON:0010313,4.35e-09,10;UBERON:0002342,4.35e-09,10;UBERON:0005062,4.35e-09,10;UBERON:0002081,4.97e-09,2;UBERON:0010227,4.97e-09,2;UBERON:0002133,5.37e-09,2;UBERON:0000078,3.50e-08,2;UBERON:0007497,3.50e-08,2;UBERON:0003643,3.50e-08,2;UBERON:0003504,3.50e-08,2;UBERON:0003469,3.50e-08,2;UBERON:0003496,3.50e-08,2;UBERON:0002012,3.50e-08,2;UBERON:0008886,3.50e-08,2;UBERON:0007303,3.50e-08,2;UBERON:0002061,3.50e-08,2;UBERON:0005432,3.50e-08,2;UBERON:0004363,3.50e-08,2;UBERON:0007500,1.56e-07,59;UBERON:0001981,1.56e-07,59;UBERON:0004537,1.56e-07,59;UBERON:0006965,1.56e-07,59;UBERON:0000055,2.92e-07,68;UBERON:0000926,2.92e-07,315;UBERON:0004120,2.92e-07,315;UBERON:0006603,2.92e-07,315;UBERON:0000483,6.32e-07,306;UBERON:0000119,8.78e-07,309 | |||
|phase1_expression=1.63510541343501,1.2846031433459,3.80576891059122,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,27.4987352478491,3.06870148424473,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0.560677600142307,2.1349799145941,0.24666754841716,9.64754209739275,3.50247747381189,4.57693328717684,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,1.24775401476023,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57614175266775,7.05408087008876,0.823240336780769,0,5.33087923113819,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,2.43464383585832,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0.924100740528266,1.06461206063404,0,0,1.86062352764589,0,0,0.190630193923825,0.767693373934002,0,0.318203247925937,5.49464048139461,0,0,0,1.01091240786658,4.75530963519025,2.10629228119491,0,0,0,0,0,5.65040583101214,0.551365343546124,6.6343897524122,3.94605796728386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,14.9942073082768,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49560164325664,1.3749625440701,29.4327940076494,29.1531340728527,84.5575314829045,11.3817443295355,3.09043973438941,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,10.0057345692271,11.9176554665778,0,0,0,0,0,0,0,0.339936274560377,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0,0.992332043623902,0,0,0,1.08803560673895,1.2534494701135,2.45076461410769,0.983617892129413,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05956061557231,3.93200401784422,3.73049281398673,5.02707509964755,0,0.449803112163605,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.706437835654626,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,23.2862877605011,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,1.2217909337381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,4.20071244635888,0.404234377916439,0,0,0,0.645499848534087,0,0,0,0,0,23.4640942403454,0.122241444182866,0,0.665756774185513,0.805095174364105,0 | |phase1_expression=1.63510541343501,1.2846031433459,3.80576891059122,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,27.4987352478491,3.06870148424473,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0.560677600142307,2.1349799145941,0.24666754841716,9.64754209739275,3.50247747381189,4.57693328717684,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,1.24775401476023,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57614175266775,7.05408087008876,0.823240336780769,0,5.33087923113819,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,2.43464383585832,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0.924100740528266,1.06461206063404,0,0,1.86062352764589,0,0,0.190630193923825,0.767693373934002,0,0.318203247925937,5.49464048139461,0,0,0,1.01091240786658,4.75530963519025,2.10629228119491,0,0,0,0,0,5.65040583101214,0.551365343546124,6.6343897524122,3.94605796728386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,14.9942073082768,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49560164325664,1.3749625440701,29.4327940076494,29.1531340728527,84.5575314829045,11.3817443295355,3.09043973438941,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,10.0057345692271,11.9176554665778,0,0,0,0,0,0,0,0.339936274560377,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0,0.992332043623902,0,0,0,1.08803560673895,1.2534494701135,2.45076461410769,0.983617892129413,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05956061557231,3.93200401784422,3.73049281398673,5.02707509964755,0,0.449803112163605,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.706437835654626,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,23.2862877605011,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,1.2217909337381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,4.20071244635888,0.404234377916439,0,0,0,0.645499848534087,0,0,0,0,0,23.4640942403454,0.122241444182866,0,0.665756774185513,0.805095174364105,0 | ||
|short_description=p@chr17:77019002..77019027,+ | |short_description=p@chr17:77019002..77019027,+ | ||
}} | }} |
Latest revision as of 22:11, 25 July 2015
Short description: | p@chr17:77019002..77019027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77019002..77019027, + |
Coexpression cluster: | C1794_heart_Cardiac_seminal_umbilical_ductus_Smooth_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.62e-42 | 16 |
cardiac mesenchymal cell | 4.71e-15 | 4 |
migratory trunk neural crest cell | 4.71e-15 | 4 |
cardiac muscle cell | 1.96e-12 | 3 |
cardiac muscle myoblast | 1.96e-12 | 3 |
smooth muscle cell of the coronary artery | 3.10e-11 | 3 |
fat cell | 1.89e-10 | 15 |
cardiac fibroblast | 3.51e-10 | 6 |
striated muscle cell | 2.01e-09 | 4 |
hepatic stem cell | 1.15e-08 | 2 |
hepatic mesenchymal stem cell | 1.15e-08 | 2 |
adipocyte of breast | 8.58e-08 | 2 |
vascular associated smooth muscle cell | 1.44e-07 | 32 |
muscle cell | 4.38e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.50e-09 | 2 |