FFCP PHASE1:Hg19::chr1:204433930..204433969,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:204433930..204433969,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr1:204433930..204433969,- | |description=CAGE_peak_at_chr1:204433930..204433969,- | ||
|id=chr1:204433930..204433969,- | |id=chr1:204433930..204433969,- | ||
|ontology_enrichment_celltype=CL:0002274!1.05e-22!5;CL:0000457!1.05e-22!5;CL:0002191!1.05e-22!5;CL:0000097!1.05e-22!5;CL:0000831!1.05e-22!5;CL:0002028!1.05e-22!5;CL:0002618!3.35e-13!3;CL:0000163!1.77e-12!9;CL:0002139!3.28e-10!24;CL:0000115!1.97e-08!35;CL:0000071!5.21e-08!18;CL:0002546!5.21e-08!18;CL:0002544!3.93e-07!6;CL:0002543!8.08e-07!6 | |ontology_enrichment_celltype=CL:0002274!1.05e-22!5;CL:0000457!1.05e-22!5;CL:0002191!1.05e-22!5;CL:0000097!1.05e-22!5;CL:0000831!1.05e-22!5;CL:0002028!1.05e-22!5;CL:0002618!3.35e-13!3;CL:0000163!1.77e-12!9;CL:0002139!3.28e-10!24;CL:0000115!1.97e-08!35;CL:0000071!5.21e-08!18;CL:0002546!5.21e-08!18;CL:0002544!3.93e-07!6;CL:0002543!8.08e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.52e-71;5!CL:0000163;3.80e-40;9!CL:0002262;5.15e-21;2!CL:1000398;5.15e-21;2!CL:0000151;7.37e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.52e-71,5;CL:0002028,2.52e-71,5;CL:0000163,3.80e-40,9;CL:0002262,4.66e-21,2;CL:1000398,4.66e-21,2;CL:0000151,9.84e-11,36 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-13!115;UBERON:0002950!1.22e-09!2;UBERON:0001891!1.22e-09!2;UBERON:0009616!1.22e-09!2;UBERON:0002298!1.24e-08!8;UBERON:0002066!4.21e-08!5;UBERON:0001986!5.21e-08!18;UBERON:0004638!5.21e-08!18;UBERON:0004852!5.21e-08!18;UBERON:0000055!9.22e-08!69;UBERON:0003978!7.11e-07!3;UBERON:0009751!7.11e-07!3;UBERON:0000946!7.11e-07!3;UBERON:0002523!7.11e-07!3;UBERON:0005983!7.11e-07!3;UBERON:0002165!7.11e-07!3;UBERON:0002062!7.11e-07!3;UBERON:0007280!7.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.81e-40;1!UBERON:0005208;1.81e-40;1!UBERON:0004145;1.81e-40;1!UBERON:0005946;1.81e-40;1!UBERON:0005965;1.81e-40;1!UBERON:0002078;1.81e-40;1!UBERON:0001281;5.15e-21;2!UBERON:0003497;5.15e-21;2!UBERON:0003909;5.15e-21;2!UBERON:0002081;5.15e-21;2!UBERON:0002133;5.15e-21;2!UBERON:0003835;5.15e-21;2!UBERON:0003978;1.71e-14;3!UBERON:0004151;1.71e-14;3!UBERON:0000946;1.71e-14;3!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0003513;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.21e-40,1;UBERON:0005208,2.21e-40,1;UBERON:0005946,2.21e-40,1;UBERON:0005965,2.21e-40,1;UBERON:0002078,2.21e-40,1;UBERON:0001281,4.66e-21,2;UBERON:0003497,4.66e-21,2;UBERON:0003909,4.66e-21,2;UBERON:0003835,4.66e-21,2;UBERON:0002081,5.70e-21,2;UBERON:0002133,5.70e-21,2;UBERON:0010227,5.70e-21,2;UBERON:0001280,1.60e-14,3;UBERON:0004647,1.60e-14,3;UBERON:0005171,1.60e-14,3;UBERON:0003978,1.83e-14,3;UBERON:0009751,1.83e-14,3;UBERON:0004151,1.83e-14,3;UBERON:0000946,1.83e-14,3;UBERON:0002523,1.83e-14,3;UBERON:0005983,1.83e-14,3;UBERON:0004145,1.83e-14,3;UBERON:0002165,1.83e-14,3;UBERON:0002062,1.83e-14,3;UBERON:0007280,1.83e-14,3;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0003513,5.70e-07,7;UBERON:0004797,6.04e-07,7 | |||
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| ||
|short_description=p@chr1:204433930..204433969,- | |short_description=p@chr1:204433930..204433969,- | ||
}} | }} |
Latest revision as of 02:38, 28 July 2015
Short description: | p@chr1:204433930..204433969, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204433930..204433969, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.52e-71 | 5 |
basophil mast progenitor cell | 2.52e-71 | 5 |
endocrine cell | 3.80e-40 | 9 |
endothelial cell of sinusoid | 4.66e-21 | 2 |
endothelial cell of hepatic sinusoid | 4.66e-21 | 2 |
secretory cell | 9.84e-11 | 36 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.21e-40 | 1 |
right atrium valve | 2.21e-40 | 1 |
outflow tract of atrium | 2.21e-40 | 1 |
outflow part of right atrium | 2.21e-40 | 1 |
right cardiac atrium | 2.21e-40 | 1 |
hepatic sinusoid | 4.66e-21 | 2 |
abdomen blood vessel | 4.66e-21 | 2 |
sinusoid | 4.66e-21 | 2 |
abdominal segment blood vessel | 4.66e-21 | 2 |
cardiac atrium | 5.70e-21 | 2 |
atrioventricular valve | 5.70e-21 | 2 |
future cardiac atrium | 5.70e-21 | 2 |
liver parenchyma | 1.60e-14 | 3 |
liver lobule | 1.60e-14 | 3 |
hepatic duct | 1.60e-14 | 3 |
valve | 1.83e-14 | 3 |
cardiac mesenchyme | 1.83e-14 | 3 |
cardiac chamber | 1.83e-14 | 3 |
cardial valve | 1.83e-14 | 3 |
tunica intima | 1.83e-14 | 3 |
heart layer | 1.83e-14 | 3 |
outflow tract | 1.83e-14 | 3 |
endocardium | 1.83e-14 | 3 |
endocardial cushion | 1.83e-14 | 3 |
presumptive endocardium | 1.83e-14 | 3 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
trunk blood vessel | 5.70e-07 | 7 |
blood vessel layer | 6.04e-07 | 7 |