FFCP PHASE1:Hg19::chr21:39875765..39875785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39875765..39875785,+ | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_at_chr21:39875765..39875785,+ | |description=CAGE_peak_at_chr21:39875765..39875785,+ | ||
|id=chr21:39875765..39875785,+ | |id=chr21:39875765..39875785,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.14e-27!24;CL:0000115!2.23e-24!35;CL:0000071!2.42e-19!18;CL:0002546!2.42e-19!18;CL:0002078!2.00e-17!44;CL:0000213!2.02e-11!57;CL:0000215!2.02e-11!57;CL:0005020!4.84e-10!6;CL:0002138!4.84e-10!6;CL:0005022!4.84e-10!6;CL:0002543!6.21e-10!6;CL:1000413!1.16e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.14e-27!24;CL:0000115!2.23e-24!35;CL:0000071!2.42e-19!18;CL:0002546!2.42e-19!18;CL:0002078!2.00e-17!44;CL:0000213!2.02e-11!57;CL:0000215!2.02e-11!57;CL:0005020!4.84e-10!6;CL:0002138!4.84e-10!6;CL:0005022!4.84e-10!6;CL:0002543!6.21e-10!6;CL:1000413!1.16e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.87e-63;24!CL:0000115;1.46e-54;36!CL:0000071;5.82e-41;18!CL:0002078;1.36e-32;45!CL:0002138;6.82e-25;6!CL:0002543;2.43e-24;6!CL:0000213;2.44e-22;58!CL:0000215;2.44e-22;58!CL:1000413;3.57e-15;9!CL:0002618;1.64e-13;3!CL:0002188;9.99e-13;5!CL:0002544;6.01e-11;6!CL:1000746;4.13e-09;7!CL:1000612;4.13e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.17e-64,36;CL:0002139,3.65e-63,24;CL:0002078,4.34e-50,45;CL:0000071,9.47e-41,18;CL:0002546,9.47e-41,18;CL:0000213,2.03e-37,58;CL:0000215,2.03e-37,58;CL:0005020,8.08e-25,6;CL:0002138,8.08e-25,6;CL:0005022,8.08e-25,6;CL:0002543,1.60e-24,6;CL:0000222,3.95e-16,121;CL:1000413,6.92e-15,9;CL:0002618,1.54e-13,3;CL:0002188,9.00e-13,5;CL:0002544,6.86e-11,6;CL:0000076,2.55e-09,63;CL:1000746,3.84e-09,7;CL:1000612,3.84e-09,7 | |||
|ontology_enrichment_development_v019=CL:0002546;5.82e-41;18!CL:0005022;6.82e-25;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.78e-40!115;UBERON:0000477!4.40e-28!286;UBERON:0004111!6.29e-23!241;UBERON:0000025!2.93e-21!194;UBERON:0001986!2.42e-19!18;UBERON:0004638!2.42e-19!18;UBERON:0004852!2.42e-19!18;UBERON:0001049!1.11e-17!57;UBERON:0005068!1.11e-17!57;UBERON:0006241!1.11e-17!57;UBERON:0007135!1.11e-17!57;UBERON:0002616!1.28e-16!59;UBERON:0001017!1.55e-15!82;UBERON:0000955!3.81e-15!69;UBERON:0006238!3.81e-15!69;UBERON:0005743!4.37e-15!86;UBERON:0000055!5.43e-15!69;UBERON:0000487!8.42e-15!22;UBERON:0003075!9.23e-14!86;UBERON:0007284!9.23e-14!86;UBERON:0002049!1.33e-13!79;UBERON:0007798!1.33e-13!79;UBERON:0000073!1.55e-13!94;UBERON:0001016!1.55e-13!94;UBERON:0002346!1.25e-12!90;UBERON:0003080!2.14e-12!42;UBERON:0006914!2.25e-12!25;UBERON:0000483!7.66e-12!309;UBERON:0002780!1.30e-11!41;UBERON:0001890!1.30e-11!41;UBERON:0006240!1.30e-11!41;UBERON:0004872!1.32e-11!84;UBERON:0000119!1.68e-11!312;UBERON:0001009!2.14e-11!113;UBERON:0002420!3.31e-11!9;UBERON:0007245!3.31e-11!9;UBERON:0010009!3.31e-11!9;UBERON:0010011!3.31e-11!9;UBERON:0000454!3.31e-11!9;UBERON:0002308!4.12e-11!9;UBERON:0000125!4.12e-11!9;UBERON:0001981!6.06e-11!60;UBERON:0007500!6.06e-11!60;UBERON:0004537!6.06e-11!60;UBERON:0006965!6.06e-11!60;UBERON:0004535!1.32e-10!110;UBERON:0001737!3.42e-10!9;UBERON:0002020!4.39e-10!34;UBERON:0003528!4.39e-10!34;UBERON:0002298!1.42e-09!8;UBERON:0002465!6.96e-09!10;UBERON:0009663!7.57e-09!7;UBERON:0001893!1.37e-08!34;UBERON:0003056!1.63e-08!61;UBERON:0000468!2.57e-08!659;UBERON:0000064!2.80e-08!219;UBERON:0000153!2.85e-08!129;UBERON:0007811!2.85e-08!129;UBERON:0001869!3.64e-08!32;UBERON:0002791!4.39e-08!33;UBERON:0001557!4.50e-08!19;UBERON:0000467!4.61e-08!625;UBERON:0003914!4.91e-08!118;UBERON:0000480!5.41e-08!626;UBERON:0001638!7.82e-08!9;UBERON:0003920!7.82e-08!9;UBERON:0004582!7.82e-08!9;UBERON:0003915!1.16e-07!9;UBERON:0004700!1.16e-07!9;UBERON:0001917!1.16e-07!9;UBERON:0000033!1.46e-07!123;UBERON:0001473!3.46e-07!8;UBERON:0004536!3.46e-07!8;UBERON:0006558!3.46e-07!8;UBERON:0004121!8.73e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.82e-41;18!UBERON:0001986;5.82e-41;18!UBERON:0004852;5.82e-41;18!UBERON:0000487;6.71e-33;22!UBERON:0006914;1.51e-28;25!UBERON:0001473;1.69e-18;8!UBERON:0004536;1.69e-18;8!UBERON:0006558;1.69e-18;8!UBERON:0000490;2.21e-18;33!UBERON:0001638;5.25e-16;9!UBERON:0003920;5.25e-16;9!UBERON:0004582;5.25e-16;9!UBERON:0000055;1.09e-15;65!UBERON:0003915;3.57e-15;9!UBERON:0004700;3.57e-15;9!UBERON:0001917;3.57e-15;9!UBERON:0002465;1.17e-14;10!UBERON:0007500;2.56e-10;56!UBERON:0001981;2.56e-10;56!UBERON:0004537;2.56e-10;56!UBERON:0002049;5.49e-10;75!UBERON:0007798;5.49e-10;75!UBERON:0000074;4.13e-09;7!UBERON:0001229;4.13e-09;7!UBERON:0002081;4.78e-09;2!UBERON:0000025;1.04e-08;93!UBERON:0001875;2.04e-08;2!UBERON:0006514;2.04e-08;2!UBERON:0003914;2.19e-08;74!UBERON:0002066;2.91e-08;5!UBERON:0001009;7.15e-08;112!UBERON:0004535;5.44e-07;109!UBERON:0002420;8.82e-07;9!UBERON:0000125;8.82e-07;9!UBERON:0007245;8.82e-07;9!UBERON:0002308;8.82e-07;9!UBERON:0010009;8.82e-07;9!UBERON:0010011;8.82e-07;9!UBERON:0000454;8.82e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.47e-41,18;UBERON:0001986,9.47e-41,18;UBERON:0004852,9.47e-41,18;UBERON:0000487,9.95e-33,22;UBERON:0006914,2.13e-28,25;UBERON:0000055,2.57e-28,68;UBERON:0002049,6.64e-24,78;UBERON:0007798,6.64e-24,78;UBERON:0004111,3.90e-22,240;UBERON:0000025,2.27e-20,192;UBERON:0001473,1.91e-18,8;UBERON:0004536,1.91e-18,8;UBERON:0006558,1.91e-18,8;UBERON:0007500,1.39e-17,59;UBERON:0001981,1.39e-17,59;UBERON:0004537,1.39e-17,59;UBERON:0006965,1.39e-17,59;UBERON:0004535,5.53e-17,109;UBERON:0001009,2.30e-16,112;UBERON:0001638,4.01e-16,9;UBERON:0003920,4.01e-16,9;UBERON:0004582,4.01e-16,9;UBERON:0003915,6.92e-15,9;UBERON:0004700,6.92e-15,9;UBERON:0001917,6.92e-15,9;UBERON:0002465,1.29e-14,10;UBERON:0004872,9.19e-13,83;UBERON:0003914,2.46e-12,117;UBERON:0000483,1.85e-10,306;UBERON:0000119,2.83e-10,309;UBERON:0010532,3.84e-09,7;UBERON:0000074,3.84e-09,7;UBERON:0001229,3.84e-09,7;UBERON:0001230,3.84e-09,7;UBERON:0003220,3.84e-09,7;UBERON:0005749,3.84e-09,7;UBERON:0004199,3.84e-09,7;UBERON:0004209,3.84e-09,7;UBERON:0004198,3.84e-09,7;UBERON:0002081,4.60e-09,2;UBERON:0010227,4.60e-09,2;UBERON:0001875,1.75e-08,2;UBERON:0006514,1.75e-08,2;UBERON:0002066,2.81e-08,5;UBERON:0005103,5.27e-08,8;UBERON:0000083,5.27e-08,8;UBERON:0009201,5.27e-08,8;UBERON:0006553,5.27e-08,8;UBERON:0003074,5.27e-08,8;UBERON:0003060,5.27e-08,8;UBERON:0000080,4.06e-07,9;UBERON:0002120,4.06e-07,9;UBERON:0004875,4.06e-07,9;UBERON:0005721,4.06e-07,9;UBERON:0005754,4.06e-07,9;UBERON:0007297,4.06e-07,9;UBERON:0003528,4.55e-07,34;UBERON:0002020,4.55e-07,34;UBERON:0002420,6.30e-07,9;UBERON:0007245,6.30e-07,9;UBERON:0010009,6.30e-07,9;UBERON:0010011,6.30e-07,9;UBERON:0000454,6.30e-07,9;UBERON:0001049,7.09e-07,56;UBERON:0005068,7.09e-07,56;UBERON:0006241,7.09e-07,56;UBERON:0007135,7.09e-07,56;UBERON:0000125,9.12e-07,9;UBERON:0002308,9.12e-07,9 | |||
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|short_description=p@chr21:39875765..39875785,+ | |short_description=p@chr21:39875765..39875785,+ | ||
}} | }} |
Latest revision as of 17:53, 28 July 2015
Short description: | p@chr21:39875765..39875785, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39875765..39875785, + |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.17e-64 | 36 |
endothelial cell of vascular tree | 3.65e-63 | 24 |
meso-epithelial cell | 4.34e-50 | 45 |
blood vessel endothelial cell | 9.47e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.47e-41 | 18 |
lining cell | 2.03e-37 | 58 |
barrier cell | 2.03e-37 | 58 |
lymphangioblast | 8.08e-25 | 6 |
endothelial cell of lymphatic vessel | 8.08e-25 | 6 |
vascular lymphangioblast | 8.08e-25 | 6 |
vein endothelial cell | 1.60e-24 | 6 |
mesodermal cell | 3.95e-16 | 121 |
endothelial cell of artery | 6.92e-15 | 9 |
endothelial cell of umbilical vein | 1.54e-13 | 3 |
glomerular endothelial cell | 9.00e-13 | 5 |
aortic endothelial cell | 6.86e-11 | 6 |
squamous epithelial cell | 2.55e-09 | 63 |
glomerular cell | 3.84e-09 | 7 |
kidney corpuscule cell | 3.84e-09 | 7 |