FFCP PHASE1:Hg19::chr2:47572119..47572151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000413185,ENST00000448713,ENST00000450550_5end | |association_with_transcript=0bp_to_ENST00000413185,ENST00000448713,ENST00000450550_5end | ||
|cluster_id=chr2:47572119..47572151,- | |||
|coexpression_cluster_id=C4234 | |coexpression_cluster_id=C4234 | ||
|description=CAGE_peak_1_at_ENST00000413185_5end,CAGE_peak_1_at_ENST00000448713_5end,CAGE_peak_1_at_ENST00000450550_5end | |description=CAGE_peak_1_at_ENST00000413185_5end,CAGE_peak_1_at_ENST00000448713_5end,CAGE_peak_1_at_ENST00000450550_5end | ||
|id=chr2:47572119..47572151,- | |id=chr2:47572119..47572151,- | ||
|ontology_enrichment_celltype=CL:0002319!2.71e-07!25 | |ontology_enrichment_celltype=CL:0002319!2.71e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.33e-09;6!CL:0000404;2.33e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.92e-09,6;CL:0000031,2.92e-09,6;CL:0000404,2.92e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.33e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.67e-33!82;UBERON:0005743!7.55e-32!86;UBERON:0000073!8.41e-31!94;UBERON:0001016!8.41e-31!94;UBERON:0007023!2.75e-29!115;UBERON:0001049!9.87e-29!57;UBERON:0005068!9.87e-29!57;UBERON:0006241!9.87e-29!57;UBERON:0007135!9.87e-29!57;UBERON:0000955!2.22e-26!69;UBERON:0006238!2.22e-26!69;UBERON:0003075!5.29e-26!86;UBERON:0007284!5.29e-26!86;UBERON:0002346!1.42e-23!90;UBERON:0002616!3.33e-23!59;UBERON:0004111!8.75e-23!241;UBERON:0000025!6.83e-21!194;UBERON:0003080!2.42e-19!42;UBERON:0002780!1.36e-18!41;UBERON:0001890!1.36e-18!41;UBERON:0006240!1.36e-18!41;UBERON:0000477!2.48e-18!286;UBERON:0003056!8.59e-18!61;UBERON:0004121!6.89e-17!169;UBERON:0000481!8.14e-17!347;UBERON:0000153!1.49e-16!129;UBERON:0007811!1.49e-16!129;UBERON:0000033!3.10e-16!123;UBERON:0000924!1.01e-15!173;UBERON:0006601!1.01e-15!173;UBERON:0000483!1.08e-15!309;UBERON:0000475!2.40e-15!365;UBERON:0002020!2.75e-15!34;UBERON:0003528!2.75e-15!34;UBERON:0000119!4.42e-15!312;UBERON:0001893!6.62e-15!34;UBERON:0002791!1.31e-14!33;UBERON:0000468!2.53e-14!659;UBERON:0001869!1.37e-13!32;UBERON:0000467!2.98e-13!625;UBERON:0000480!4.22e-13!626;UBERON:0000064!2.66e-12!219;UBERON:0000922!4.92e-12!612;UBERON:0000062!6.18e-12!511;UBERON:0005177!2.10e-11!107;UBERON:0003076!1.05e-10!15;UBERON:0003057!1.05e-10!15;UBERON:0000956!1.66e-10!25;UBERON:0000203!1.66e-10!25;UBERON:0002050!8.77e-10!605;UBERON:0005423!8.77e-10!605;UBERON:0002619!1.03e-09!22;UBERON:0000923!2.16e-09!604;UBERON:0005291!2.16e-09!604;UBERON:0006598!2.16e-09!604;UBERON:0002532!2.16e-09!604;UBERON:0001950!7.17e-09!20;UBERON:0004733!1.93e-08!12;UBERON:0002028!1.93e-08!12;UBERON:0007277!1.93e-08!12;UBERON:0000489!3.44e-08!32;UBERON:0004921!5.04e-08!129;UBERON:0004185!5.04e-08!129;UBERON:0000466!6.67e-08!126;UBERON:0005409!1.48e-07!35;UBERON:0004732!1.96e-07!13;UBERON:0000464!3.10e-07!104;UBERON:0002680!5.93e-07!9;UBERON:0001895!5.93e-07!9;UBERON:0010092!5.93e-07!9;UBERON:0005172!9.21e-07!55;UBERON:0005173!9.21e-07!55 | |ontology_enrichment_uberon=UBERON:0001017!8.67e-33!82;UBERON:0005743!7.55e-32!86;UBERON:0000073!8.41e-31!94;UBERON:0001016!8.41e-31!94;UBERON:0007023!2.75e-29!115;UBERON:0001049!9.87e-29!57;UBERON:0005068!9.87e-29!57;UBERON:0006241!9.87e-29!57;UBERON:0007135!9.87e-29!57;UBERON:0000955!2.22e-26!69;UBERON:0006238!2.22e-26!69;UBERON:0003075!5.29e-26!86;UBERON:0007284!5.29e-26!86;UBERON:0002346!1.42e-23!90;UBERON:0002616!3.33e-23!59;UBERON:0004111!8.75e-23!241;UBERON:0000025!6.83e-21!194;UBERON:0003080!2.42e-19!42;UBERON:0002780!1.36e-18!41;UBERON:0001890!1.36e-18!41;UBERON:0006240!1.36e-18!41;UBERON:0000477!2.48e-18!286;UBERON:0003056!8.59e-18!61;UBERON:0004121!6.89e-17!169;UBERON:0000481!8.14e-17!347;UBERON:0000153!1.49e-16!129;UBERON:0007811!1.49e-16!129;UBERON:0000033!3.10e-16!123;UBERON:0000924!1.01e-15!173;UBERON:0006601!1.01e-15!173;UBERON:0000483!1.08e-15!309;UBERON:0000475!2.40e-15!365;UBERON:0002020!2.75e-15!34;UBERON:0003528!2.75e-15!34;UBERON:0000119!4.42e-15!312;UBERON:0001893!6.62e-15!34;UBERON:0002791!1.31e-14!33;UBERON:0000468!2.53e-14!659;UBERON:0001869!1.37e-13!32;UBERON:0000467!2.98e-13!625;UBERON:0000480!4.22e-13!626;UBERON:0000064!2.66e-12!219;UBERON:0000922!4.92e-12!612;UBERON:0000062!6.18e-12!511;UBERON:0005177!2.10e-11!107;UBERON:0003076!1.05e-10!15;UBERON:0003057!1.05e-10!15;UBERON:0000956!1.66e-10!25;UBERON:0000203!1.66e-10!25;UBERON:0002050!8.77e-10!605;UBERON:0005423!8.77e-10!605;UBERON:0002619!1.03e-09!22;UBERON:0000923!2.16e-09!604;UBERON:0005291!2.16e-09!604;UBERON:0006598!2.16e-09!604;UBERON:0002532!2.16e-09!604;UBERON:0001950!7.17e-09!20;UBERON:0004733!1.93e-08!12;UBERON:0002028!1.93e-08!12;UBERON:0007277!1.93e-08!12;UBERON:0000489!3.44e-08!32;UBERON:0004921!5.04e-08!129;UBERON:0004185!5.04e-08!129;UBERON:0000466!6.67e-08!126;UBERON:0005409!1.48e-07!35;UBERON:0004732!1.96e-07!13;UBERON:0000464!3.10e-07!104;UBERON:0002680!5.93e-07!9;UBERON:0001895!5.93e-07!9;UBERON:0010092!5.93e-07!9;UBERON:0005172!9.21e-07!55;UBERON:0005173!9.21e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.03e-11;53!UBERON:0002616;4.03e-11;53!UBERON:0000160;1.11e-10;17!UBERON:0000922;2.62e-10;49!UBERON:0004733;1.03e-09;12!UBERON:0002028;1.03e-09;12!UBERON:0002780;6.95e-09;41!UBERON:0001890;6.95e-09;41!UBERON:0004732;9.12e-09;13!UBERON:0001016;1.38e-08;83!UBERON:0000955;7.26e-08;68!UBERON:0001017;1.23e-07;75!UBERON:0005409;1.46e-07;22!UBERON:0003528;1.60e-07;34!UBERON:0002020;1.60e-07;34!UBERON:0002791;1.77e-07;32!UBERON:0002108;1.95e-07;4!UBERON:0007023;2.27e-07;114!UBERON:0002680;3.58e-07;9!UBERON:0001895;3.58e-07;9!UBERON:0001893;5.02e-07;34 | |||
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| ||
|short_description=p1@ENST00000413185,p1@ENST00000448713,p1@ENST00000450550 | |short_description=p1@ENST00000413185,p1@ENST00000448713,p1@ENST00000450550 | ||
}} | }} |
Latest revision as of 10:35, 29 July 2015
Short description: | p1@ENST00000413185, p1@ENST00000448713, p1@ENST00000450550 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413185_5end, CAGE_peak_1_at_ENST00000448713_5end, CAGE_peak_1_at_ENST00000450550_5end |
Coexpression cluster: | C4234_occipital_colon_parietal_duodenum_brain_temporal_spinal |
Association with transcript: | 0bp_to_ENST00000413185, ENST00000448713, ENST00000450550_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.92e-09 | 6 |
neuroblast | 2.92e-09 | 6 |
electrically signaling cell | 2.92e-09 | 6 |