FFCP PHASE1:Hg19::chr3:98699880..98699906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000473756_5end | |association_with_transcript=0bp_to_ENST00000473756_5end | ||
|cluster_id=chr3:98699880..98699906,+ | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_2_at_ENST00000473756_5end | |description=CAGE_peak_2_at_ENST00000473756_5end | ||
|id=chr3:98699880..98699906,+ | |id=chr3:98699880..98699906,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.27e-24!246;CL:0002321!4.52e-24!248;CL:0000680!2.09e-21!57;CL:0000056!2.09e-21!57;CL:0000355!2.09e-21!57;CL:0000548!7.52e-21!679;CL:0000004!7.52e-21!679;CL:0000255!7.52e-21!679;CL:0000012!2.15e-20!682;CL:0000187!3.92e-20!54;CL:0000183!1.28e-19!59;CL:0000192!1.93e-19!42;CL:0000514!1.93e-19!42;CL:0000359!8.39e-18!32;CL:0000055!2.97e-17!180;CL:0000393!1.93e-16!60;CL:0000211!1.93e-16!60;CL:0000222!2.82e-16!119;CL:0000144!2.47e-15!625;CL:0002371!4.93e-15!591;CL:0000003!1.08e-14!722;CL:0000066!2.22e-13!254;CL:1000497!9.00e-10!18;CL:0002518!9.00e-10!18;CL:1000449!7.56e-09!16;CL:1000507!4.20e-08!12;CL:1000494!4.20e-08!12;CL:0002539!5.37e-08!10 | |ontology_enrichment_celltype=CL:0000220!1.27e-24!246;CL:0002321!4.52e-24!248;CL:0000680!2.09e-21!57;CL:0000056!2.09e-21!57;CL:0000355!2.09e-21!57;CL:0000548!7.52e-21!679;CL:0000004!7.52e-21!679;CL:0000255!7.52e-21!679;CL:0000012!2.15e-20!682;CL:0000187!3.92e-20!54;CL:0000183!1.28e-19!59;CL:0000192!1.93e-19!42;CL:0000514!1.93e-19!42;CL:0000359!8.39e-18!32;CL:0000055!2.97e-17!180;CL:0000393!1.93e-16!60;CL:0000211!1.93e-16!60;CL:0000222!2.82e-16!119;CL:0000144!2.47e-15!625;CL:0002371!4.93e-15!591;CL:0000003!1.08e-14!722;CL:0000066!2.22e-13!254;CL:1000497!9.00e-10!18;CL:0002518!9.00e-10!18;CL:1000449!7.56e-09!16;CL:1000507!4.20e-08!12;CL:1000494!4.20e-08!12;CL:0002539!5.37e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.04e-17;32!CL:1000507;5.38e-15;10!CL:1000494;5.38e-15;10!CL:1000497;3.13e-14;17!CL:0002518;3.13e-14;17!CL:0000192;1.67e-13;43!CL:1000449;8.65e-13;15!CL:0002539;1.82e-09;10!CL:0000187;4.12e-09;55!CL:0002681;4.74e-09;12!CL:0002584;4.74e-09;12!CL:0000075;3.15e-07;27!CL:0000393;7.50e-07;61!CL:0000211;7.50e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.15e-18,32;CL:0000192,9.03e-17,43;CL:0000514,9.03e-17,43;CL:0000187,2.71e-15,55;CL:0000680,4.16e-15,58;CL:0000056,4.16e-15,58;CL:0000355,4.16e-15,58;CL:1000507,6.23e-15,10;CL:1000494,6.23e-15,10;CL:0002321,3.43e-14,250;CL:1000497,3.58e-14,17;CL:0002518,3.58e-14,17;CL:0000393,7.49e-13,61;CL:0000211,7.49e-13,61;CL:1000449,8.49e-13,15;CL:0000066,1.76e-12,253;CL:0002539,1.62e-09,10;CL:0002681,4.42e-09,12;CL:0002584,4.42e-09,12;CL:0000222,2.04e-08,121;CL:0000075,2.85e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000514;1.67e-13;43!CL:0000355;8.78e-09;58 | |||
|ontology_enrichment_disease=DOID:120!6.80e-08!27;DOID:193!6.52e-07!29 | |ontology_enrichment_disease=DOID:120!6.80e-08!27;DOID:193!6.52e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:120;1.18e-07;27!DOID:193;7.35e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.22e-07,27;DOID:193,7.57e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!6.44e-24!82;UBERON:0005256!6.82e-23!143;UBERON:0004290!8.71e-21!70;UBERON:0000914!1.81e-19!83;UBERON:0002329!1.81e-19!83;UBERON:0003077!1.81e-19!83;UBERON:0003059!1.81e-19!83;UBERON:0007282!1.81e-19!83;UBERON:0009618!1.81e-19!83;UBERON:0007285!1.81e-19!83;UBERON:0000119!2.07e-19!312;UBERON:0000483!6.81e-19!309;UBERON:0001134!8.09e-19!61;UBERON:0002036!8.09e-19!61;UBERON:0003082!8.09e-19!61;UBERON:0002385!1.16e-17!63;UBERON:0001015!1.16e-17!63;UBERON:0000383!1.16e-17!63;UBERON:0002100!2.21e-15!216;UBERON:0000490!4.37e-15!138;UBERON:0003914!1.33e-14!118;UBERON:0001637!6.90e-14!42;UBERON:0003509!6.90e-14!42;UBERON:0004572!6.90e-14!42;UBERON:0003104!6.89e-13!238;UBERON:0009142!6.89e-13!238;UBERON:0002049!9.25e-13!79;UBERON:0007798!9.25e-13!79;UBERON:0000481!3.52e-12!347;UBERON:0000475!4.35e-12!365;UBERON:0004573!2.68e-11!33;UBERON:0004571!2.68e-11!33;UBERON:0007625!6.92e-10!11;UBERON:0000055!2.04e-09!69;UBERON:0001981!3.90e-09!60;UBERON:0007500!3.90e-09!60;UBERON:0004537!3.90e-09!60;UBERON:0006965!3.90e-09!60;UBERON:0004535!6.51e-09!110;UBERON:0004211!7.56e-09!16;UBERON:0001285!7.56e-09!16;UBERON:0007684!7.56e-09!16;UBERON:0003220!7.56e-09!16;UBERON:0004208!7.56e-09!16;UBERON:0006554!9.13e-09!44;UBERON:0001008!2.30e-08!45;UBERON:0001009!3.00e-08!113;UBERON:0009773!4.20e-08!12;UBERON:0001231!4.20e-08!12;UBERON:0004810!4.20e-08!12;UBERON:0006555!4.89e-08!17;UBERON:0005103!4.89e-08!17;UBERON:0000083!4.89e-08!17;UBERON:0009201!4.89e-08!17;UBERON:0004819!4.89e-08!17;UBERON:0006553!4.89e-08!17;UBERON:0003074!4.89e-08!17;UBERON:0003060!4.89e-08!17;UBERON:0004237!5.37e-08!10;UBERON:0004695!5.37e-08!10;UBERON:0002111!5.37e-08!10;UBERON:0004178!5.37e-08!10;UBERON:0000058!5.95e-08!26;UBERON:0004872!9.92e-08!84;UBERON:0000080!2.53e-07!18;UBERON:0002120!2.53e-07!18;UBERON:0004875!2.53e-07!18;UBERON:0005721!2.53e-07!18;UBERON:0005754!2.53e-07!18;UBERON:0007297!2.53e-07!18;UBERON:0000467!4.30e-07!625;UBERON:0000923!4.56e-07!604;UBERON:0005291!4.56e-07!604;UBERON:0006598!4.56e-07!604;UBERON:0002532!4.56e-07!604;UBERON:0000480!5.37e-07!626;UBERON:0002050!5.69e-07!605;UBERON:0005423!5.69e-07!605;UBERON:0001135!6.37e-07!15 | |ontology_enrichment_uberon=UBERON:0000486!6.44e-24!82;UBERON:0005256!6.82e-23!143;UBERON:0004290!8.71e-21!70;UBERON:0000914!1.81e-19!83;UBERON:0002329!1.81e-19!83;UBERON:0003077!1.81e-19!83;UBERON:0003059!1.81e-19!83;UBERON:0007282!1.81e-19!83;UBERON:0009618!1.81e-19!83;UBERON:0007285!1.81e-19!83;UBERON:0000119!2.07e-19!312;UBERON:0000483!6.81e-19!309;UBERON:0001134!8.09e-19!61;UBERON:0002036!8.09e-19!61;UBERON:0003082!8.09e-19!61;UBERON:0002385!1.16e-17!63;UBERON:0001015!1.16e-17!63;UBERON:0000383!1.16e-17!63;UBERON:0002100!2.21e-15!216;UBERON:0000490!4.37e-15!138;UBERON:0003914!1.33e-14!118;UBERON:0001637!6.90e-14!42;UBERON:0003509!6.90e-14!42;UBERON:0004572!6.90e-14!42;UBERON:0003104!6.89e-13!238;UBERON:0009142!6.89e-13!238;UBERON:0002049!9.25e-13!79;UBERON:0007798!9.25e-13!79;UBERON:0000481!3.52e-12!347;UBERON:0000475!4.35e-12!365;UBERON:0004573!2.68e-11!33;UBERON:0004571!2.68e-11!33;UBERON:0007625!6.92e-10!11;UBERON:0000055!2.04e-09!69;UBERON:0001981!3.90e-09!60;UBERON:0007500!3.90e-09!60;UBERON:0004537!3.90e-09!60;UBERON:0006965!3.90e-09!60;UBERON:0004535!6.51e-09!110;UBERON:0004211!7.56e-09!16;UBERON:0001285!7.56e-09!16;UBERON:0007684!7.56e-09!16;UBERON:0003220!7.56e-09!16;UBERON:0004208!7.56e-09!16;UBERON:0006554!9.13e-09!44;UBERON:0001008!2.30e-08!45;UBERON:0001009!3.00e-08!113;UBERON:0009773!4.20e-08!12;UBERON:0001231!4.20e-08!12;UBERON:0004810!4.20e-08!12;UBERON:0006555!4.89e-08!17;UBERON:0005103!4.89e-08!17;UBERON:0000083!4.89e-08!17;UBERON:0009201!4.89e-08!17;UBERON:0004819!4.89e-08!17;UBERON:0006553!4.89e-08!17;UBERON:0003074!4.89e-08!17;UBERON:0003060!4.89e-08!17;UBERON:0004237!5.37e-08!10;UBERON:0004695!5.37e-08!10;UBERON:0002111!5.37e-08!10;UBERON:0004178!5.37e-08!10;UBERON:0000058!5.95e-08!26;UBERON:0004872!9.92e-08!84;UBERON:0000080!2.53e-07!18;UBERON:0002120!2.53e-07!18;UBERON:0004875!2.53e-07!18;UBERON:0005721!2.53e-07!18;UBERON:0005754!2.53e-07!18;UBERON:0007297!2.53e-07!18;UBERON:0000467!4.30e-07!625;UBERON:0000923!4.56e-07!604;UBERON:0005291!4.56e-07!604;UBERON:0006598!4.56e-07!604;UBERON:0002532!4.56e-07!604;UBERON:0000480!5.37e-07!626;UBERON:0002050!5.69e-07!605;UBERON:0005423!5.69e-07!605;UBERON:0001135!6.37e-07!15 | ||
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| ||
|short_description=p2@ENST00000473756 | |short_description=p2@ENST00000473756 | ||
}} | }} |
Latest revision as of 00:09, 30 July 2015
Short description: | p2@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 0bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.15e-18 | 32 |
smooth muscle cell | 9.03e-17 | 43 |
smooth muscle myoblast | 9.03e-17 | 43 |
muscle cell | 2.71e-15 | 55 |
muscle precursor cell | 4.16e-15 | 58 |
myoblast | 4.16e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-15 | 58 |
kidney tubule cell | 6.23e-15 | 10 |
nephron tubule epithelial cell | 6.23e-15 | 10 |
embryonic cell | 3.43e-14 | 250 |
kidney cell | 3.58e-14 | 17 |
kidney epithelial cell | 3.58e-14 | 17 |
electrically responsive cell | 7.49e-13 | 61 |
electrically active cell | 7.49e-13 | 61 |
epithelial cell of nephron | 8.49e-13 | 15 |
epithelial cell | 1.76e-12 | 253 |
aortic smooth muscle cell | 1.62e-09 | 10 |
kidney cortical cell | 4.42e-09 | 12 |
renal cortical epithelial cell | 4.42e-09 | 12 |
mesodermal cell | 2.04e-08 | 121 |
columnar/cuboidal epithelial cell | 2.85e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.22e-07 | 27 |
reproductive organ cancer | 7.57e-07 | 29 |