FFCP PHASE1:Hg19::chr6:126240167..126240193,-: Difference between revisions
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|id=chr6:126240167..126240193,-
|short_description=p@chr6:126240167..126240193,-
|description=CAGE_peak_at_chr6:126240167..126240193,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:126240167..126240193,- | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr6:126240167..126240193,- | |||
|id=chr6:126240167..126240193,- | |||
|ontology_enrichment_celltype=CL:0000860!1.98e-14!45;CL:0002057!1.22e-11!42;CL:0002194!5.71e-10!63;CL:0000576!5.71e-10!63;CL:0000040!5.71e-10!63;CL:0000559!5.71e-10!63;CL:0002009!1.91e-09!65;CL:0000839!2.83e-08!70;CL:0000557!4.61e-08!71;CL:0000766!8.92e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-55;33!CL:0002057;2.87e-55;33!CL:0000473;3.16e-43;39!CL:0000234;3.16e-43;39!CL:0000576;3.13e-25;48!CL:0000766;1.36e-15;69!CL:0000763;3.41e-10;100!CL:0002087;1.15e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-48,42;CL:0002057,2.90e-48,42;CL:0000473,2.22e-47,48;CL:0000234,2.22e-47,48;CL:0002194,2.44e-37,59;CL:0000576,2.44e-37,59;CL:0000040,2.44e-37,59;CL:0000559,2.44e-37,59;CL:0002009,4.83e-36,61;CL:0000839,3.86e-33,66;CL:0000557,1.31e-32,67;CL:0000766,3.52e-30,72;CL:0000763,3.02e-19,108;CL:0000049,3.02e-19,108;CL:0002087,6.60e-18,115;CL:0002031,4.81e-17,120;CL:0000738,1.05e-14,136;CL:0002032,5.68e-12,161;CL:0000837,5.68e-12,161;CL:0000037,2.37e-11,168;CL:0000988,1.27e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-33;42!UBERON:0005425;7.18e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.69e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.18e-10;1!UBERON:0001785;7.18e-10;1!UBERON:0002464;7.18e-10;1!UBERON:0004904;7.18e-10;1!UBERON:0001021;7.18e-10;1!UBERON:0002134;1.55e-09;1!UBERON:0005208;1.55e-09;1!UBERON:0004145;1.55e-09;1!UBERON:0005946;1.55e-09;1!UBERON:0005965;1.55e-09;1!UBERON:0002078;1.55e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-28,76;UBERON:0001474,3.40e-26,82;UBERON:0004765,1.23e-23,90;UBERON:0002405,8.68e-23,93;UBERON:0002390,1.73e-21,98;UBERON:0003061,1.73e-21,98;UBERON:0001434,5.26e-21,100;UBERON:0002193,3.02e-19,108;UBERON:0003081,1.53e-11,203;UBERON:0002204,1.95e-11,167;UBERON:0000941,6.88e-10,1;UBERON:0001785,6.88e-10,1;UBERON:0002464,6.88e-10,1;UBERON:0004904,6.88e-10,1;UBERON:0001021,6.88e-10,1;UBERON:0003902,6.88e-10,1;UBERON:0005425,6.88e-10,1;UBERON:0002134,1.25e-09,1;UBERON:0005208,1.25e-09,1;UBERON:0005946,1.25e-09,1;UBERON:0005965,1.25e-09,1;UBERON:0002078,1.25e-09,1 | |||
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| ||
|short_description=p@chr6:126240167..126240193,- | |||
}} | }} |
Latest revision as of 19:09, 30 July 2015
Short description: | p@chr6:126240167..126240193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:126240167..126240193, - |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-48 | 42 |
defensive cell | 2.22e-47 | 48 |
phagocyte | 2.22e-47 | 48 |
monopoietic cell | 2.44e-37 | 59 |
monocyte | 2.44e-37 | 59 |
monoblast | 2.44e-37 | 59 |
promonocyte | 2.44e-37 | 59 |
macrophage dendritic cell progenitor | 4.83e-36 | 61 |
myeloid lineage restricted progenitor cell | 3.86e-33 | 66 |
granulocyte monocyte progenitor cell | 1.31e-32 | 67 |
myeloid leukocyte | 3.52e-30 | 72 |
myeloid cell | 3.02e-19 | 108 |
common myeloid progenitor | 3.02e-19 | 108 |
nongranular leukocyte | 6.60e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.81e-17 | 120 |
leukocyte | 1.05e-14 | 136 |
hematopoietic oligopotent progenitor cell | 5.68e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.68e-12 | 161 |
hematopoietic stem cell | 2.37e-11 | 168 |
hematopoietic cell | 1.27e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-28 | 76 |
bone element | 3.40e-26 | 82 |
skeletal element | 1.23e-23 | 90 |
immune system | 8.68e-23 | 93 |
hematopoietic system | 1.73e-21 | 98 |
blood island | 1.73e-21 | 98 |
skeletal system | 5.26e-21 | 100 |
hemolymphoid system | 3.02e-19 | 108 |
lateral plate mesoderm | 1.53e-11 | 203 |
musculoskeletal system | 1.95e-11 | 167 |
cranial nerve II | 6.88e-10 | 1 |
cranial nerve | 6.88e-10 | 1 |
nerve trunk | 6.88e-10 | 1 |
nerve connecting eye with brain | 6.88e-10 | 1 |
nerve | 6.88e-10 | 1 |
retinal neural layer | 6.88e-10 | 1 |
presumptive neural retina | 6.88e-10 | 1 |
tricuspid valve | 1.25e-09 | 1 |
right atrium valve | 1.25e-09 | 1 |
outflow tract of atrium | 1.25e-09 | 1 |
outflow part of right atrium | 1.25e-09 | 1 |
right cardiac atrium | 1.25e-09 | 1 |