FFCP PHASE1:Hg19::chr6:126240167..126240193,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:126240167..126240193,- | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr6:126240167..126240193,- | |||
|id=chr6:126240167..126240193,- | |||
|ontology_enrichment_celltype=CL:0000860!1.98e-14!45;CL:0002057!1.22e-11!42;CL:0002194!5.71e-10!63;CL:0000576!5.71e-10!63;CL:0000040!5.71e-10!63;CL:0000559!5.71e-10!63;CL:0002009!1.91e-09!65;CL:0000839!2.83e-08!70;CL:0000557!4.61e-08!71;CL:0000766!8.92e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-55;33!CL:0002057;2.87e-55;33!CL:0000473;3.16e-43;39!CL:0000234;3.16e-43;39!CL:0000576;3.13e-25;48!CL:0000766;1.36e-15;69!CL:0000763;3.41e-10;100!CL:0002087;1.15e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-48,42;CL:0002057,2.90e-48,42;CL:0000473,2.22e-47,48;CL:0000234,2.22e-47,48;CL:0002194,2.44e-37,59;CL:0000576,2.44e-37,59;CL:0000040,2.44e-37,59;CL:0000559,2.44e-37,59;CL:0002009,4.83e-36,61;CL:0000839,3.86e-33,66;CL:0000557,1.31e-32,67;CL:0000766,3.52e-30,72;CL:0000763,3.02e-19,108;CL:0000049,3.02e-19,108;CL:0002087,6.60e-18,115;CL:0002031,4.81e-17,120;CL:0000738,1.05e-14,136;CL:0002032,5.68e-12,161;CL:0000837,5.68e-12,161;CL:0000037,2.37e-11,168;CL:0000988,1.27e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-33;42!UBERON:0005425;7.18e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.69e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.18e-10;1!UBERON:0001785;7.18e-10;1!UBERON:0002464;7.18e-10;1!UBERON:0004904;7.18e-10;1!UBERON:0001021;7.18e-10;1!UBERON:0002134;1.55e-09;1!UBERON:0005208;1.55e-09;1!UBERON:0004145;1.55e-09;1!UBERON:0005946;1.55e-09;1!UBERON:0005965;1.55e-09;1!UBERON:0002078;1.55e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-28,76;UBERON:0001474,3.40e-26,82;UBERON:0004765,1.23e-23,90;UBERON:0002405,8.68e-23,93;UBERON:0002390,1.73e-21,98;UBERON:0003061,1.73e-21,98;UBERON:0001434,5.26e-21,100;UBERON:0002193,3.02e-19,108;UBERON:0003081,1.53e-11,203;UBERON:0002204,1.95e-11,167;UBERON:0000941,6.88e-10,1;UBERON:0001785,6.88e-10,1;UBERON:0002464,6.88e-10,1;UBERON:0004904,6.88e-10,1;UBERON:0001021,6.88e-10,1;UBERON:0003902,6.88e-10,1;UBERON:0005425,6.88e-10,1;UBERON:0002134,1.25e-09,1;UBERON:0005208,1.25e-09,1;UBERON:0005946,1.25e-09,1;UBERON:0005965,1.25e-09,1;UBERON:0002078,1.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,3.16461631554365,2.0492856522328,1.89185783910868,3.10271112662957,1.29096936716765,0,0,0,0,7.65209730927256,2.24650318953266,5.11469700639233,0,0,0,2.90209238628584,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,1.3031330682307,1.81619850790011,1.84138817993782,3.16462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.441175890929576,0.653638332277218,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0.597743964753209,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0.247127877893006,0.104421949505455,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,9.92134568135651,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0.293977192243133,0.0870592065804026,0.17472666824203,0,0.290268993867255,0.803982487948041,0.246346371159628,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0.223171457441873,0,0,0,0.393915911536118,0,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,1.27668251554036,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0.11796972334774,0.183428598521679,0.346576998451015,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0.645499848534087,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:126240167..126240193,- | |||
}} |
Latest revision as of 19:09, 30 July 2015
Short description: | p@chr6:126240167..126240193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:126240167..126240193, - |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-48 | 42 |
defensive cell | 2.22e-47 | 48 |
phagocyte | 2.22e-47 | 48 |
monopoietic cell | 2.44e-37 | 59 |
monocyte | 2.44e-37 | 59 |
monoblast | 2.44e-37 | 59 |
promonocyte | 2.44e-37 | 59 |
macrophage dendritic cell progenitor | 4.83e-36 | 61 |
myeloid lineage restricted progenitor cell | 3.86e-33 | 66 |
granulocyte monocyte progenitor cell | 1.31e-32 | 67 |
myeloid leukocyte | 3.52e-30 | 72 |
myeloid cell | 3.02e-19 | 108 |
common myeloid progenitor | 3.02e-19 | 108 |
nongranular leukocyte | 6.60e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.81e-17 | 120 |
leukocyte | 1.05e-14 | 136 |
hematopoietic oligopotent progenitor cell | 5.68e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.68e-12 | 161 |
hematopoietic stem cell | 2.37e-11 | 168 |
hematopoietic cell | 1.27e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-28 | 76 |
bone element | 3.40e-26 | 82 |
skeletal element | 1.23e-23 | 90 |
immune system | 8.68e-23 | 93 |
hematopoietic system | 1.73e-21 | 98 |
blood island | 1.73e-21 | 98 |
skeletal system | 5.26e-21 | 100 |
hemolymphoid system | 3.02e-19 | 108 |
lateral plate mesoderm | 1.53e-11 | 203 |
musculoskeletal system | 1.95e-11 | 167 |
cranial nerve II | 6.88e-10 | 1 |
cranial nerve | 6.88e-10 | 1 |
nerve trunk | 6.88e-10 | 1 |
nerve connecting eye with brain | 6.88e-10 | 1 |
nerve | 6.88e-10 | 1 |
retinal neural layer | 6.88e-10 | 1 |
presumptive neural retina | 6.88e-10 | 1 |
tricuspid valve | 1.25e-09 | 1 |
right atrium valve | 1.25e-09 | 1 |
outflow tract of atrium | 1.25e-09 | 1 |
outflow part of right atrium | 1.25e-09 | 1 |
right cardiac atrium | 1.25e-09 | 1 |