FFCP PHASE1:Mm9::chr11:98187516..98187525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:98187516..98187525,- | |||
|description=CAGE_peak_at_chr11:98187516..98187525,- | |description=CAGE_peak_at_chr11:98187516..98187525,- | ||
|id=chr11:98187516..98187525,- | |id=chr11:98187516..98187525,- | ||
|ontology_enrichment_celltype=CL:0002609!9.05e-21!6;CL:0000117!1.83e-15!23;CL:0000337!1.83e-15!23;CL:0002608!5.66e-11!3;CL:0000540!3.81e-10!33;CL:0000047!3.81e-10!33;CL:0000031!3.81e-10!33;CL:0000404!3.81e-10!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0002319!2.61e-07!43;CL:0000221!4.25e-07!44;CL:0000133!4.25e-07!44 | |ontology_enrichment_celltype=CL:0002609!9.05e-21!6;CL:0000117!1.83e-15!23;CL:0000337!1.83e-15!23;CL:0002608!5.66e-11!3;CL:0000540!3.81e-10!33;CL:0000047!3.81e-10!33;CL:0000031!3.81e-10!33;CL:0000404!3.81e-10!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0002319!2.61e-07!43;CL:0000221!4.25e-07!44;CL:0000133!4.25e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,7.64e-34,6;CL:0000117,5.91e-14,23;CL:0000337,5.91e-14,23;CL:0000540,8.00e-10,33;CL:0000047,8.00e-10,33;CL:0000031,8.00e-10,33;CL:0000404,8.00e-10,33;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39;CL:0002319,1.35e-07,43;CL:0000221,1.99e-07,44;CL:0000133,1.99e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!8.63e-23!29;UBERON:0003528!8.63e-23!29;UBERON:0001893!8.63e-23!29;UBERON:0000956!3.42e-21!21;UBERON:0001869!3.42e-21!21;UBERON:0000203!3.42e-21!21;UBERON:0002020!5.49e-19!34;UBERON:0002616!3.40e-18!49;UBERON:0000955!9.31e-18!50;UBERON:0006238!9.31e-18!50;UBERON:0002780!3.70e-16!39;UBERON:0001890!3.70e-16!39;UBERON:0006240!3.70e-16!39;UBERON:0003080!1.12e-15!40;UBERON:0001049!5.30e-15!52;UBERON:0005068!5.30e-15!52;UBERON:0006241!5.30e-15!52;UBERON:0007135!5.30e-15!52;UBERON:0001017!4.06e-14!73;UBERON:0005743!4.06e-14!73;UBERON:0000073!1.24e-13!75;UBERON:0001016!1.24e-13!75;UBERON:0000033!2.47e-13!63;UBERON:0003056!3.11e-12!49;UBERON:0001954!4.89e-12!7;UBERON:0003022!4.89e-12!7;UBERON:0002421!4.89e-12!7;UBERON:0000349!4.89e-12!7;UBERON:0002600!4.89e-12!7;UBERON:0002619!1.17e-11!17;UBERON:0002346!4.72e-10!71;UBERON:0003075!4.72e-10!71;UBERON:0007284!4.72e-10!71;UBERON:0004121!5.97e-09!102;UBERON:0000924!5.97e-09!102;UBERON:0006601!5.97e-09!102;UBERON:0007811!8.76e-09!86;UBERON:0000153!1.00e-07!94;UBERON:0000064!3.37e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.27e-21,21;UBERON:0001869,1.27e-21,21;UBERON:0000203,1.27e-21,21;UBERON:0003528,9.49e-16,29;UBERON:0002791,9.49e-16,29;UBERON:0001893,9.49e-16,29;UBERON:0002020,1.79e-13,34;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0003080,1.74e-11,40;UBERON:0002616,5.17e-10,46;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0003056,2.07e-09,49;UBERON:0001049,7.09e-09,52;UBERON:0005068,7.09e-09,52;UBERON:0006241,7.09e-09,52;UBERON:0007135,7.09e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.49e-08,54;UBERON:0001016,2.47e-08,75;UBERON:0001954,3.78e-08,7;UBERON:0003022,3.78e-08,7;UBERON:0002421,3.78e-08,7;UBERON:0000349,3.78e-08,7;UBERON:0002600,3.78e-08,7;UBERON:0002619,2.79e-07,17;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,2.43010688997043,1.05162480675691,0,0,0.489963196859816,0.575072826109418,1.83843757322004,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,1.8664130215526,2.43010688997043,1.05162480675691,0,0,0.489963196859816,0.575072826109418,1.83843757322004,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr11:98187516..98187525,- | |short_description=p@chr11:98187516..98187525,- | ||
}} | }} |
Latest revision as of 12:09, 4 August 2015
Short description: | p@chr11:98187516..98187525, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:98187516..98187525, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 7.64e-34 | 6 |
CNS neuron (sensu Vertebrata) | 5.91e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-14 | 23 |
neuron | 8.00e-10 | 33 |
neuronal stem cell | 8.00e-10 | 33 |
neuroblast | 8.00e-10 | 33 |
electrically signaling cell | 8.00e-10 | 33 |
electrically responsive cell | 2.37e-08 | 39 |
electrically active cell | 2.37e-08 | 39 |
neural cell | 1.35e-07 | 43 |
ectodermal cell | 1.99e-07 | 44 |
neurectodermal cell | 1.99e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.27e-21 | 21 |
cerebral hemisphere | 1.27e-21 | 21 |
pallium | 1.27e-21 | 21 |
brain grey matter | 9.49e-16 | 29 |
regional part of telencephalon | 9.49e-16 | 29 |
telencephalon | 9.49e-16 | 29 |
gray matter | 1.79e-13 | 34 |
regional part of forebrain | 8.93e-12 | 39 |
forebrain | 8.93e-12 | 39 |
future forebrain | 8.93e-12 | 39 |
anterior neural tube | 1.74e-11 | 40 |
regional part of brain | 5.17e-10 | 46 |
brain | 8.37e-10 | 47 |
future brain | 8.37e-10 | 47 |
pre-chordal neural plate | 2.07e-09 | 49 |
neural tube | 7.09e-09 | 52 |
neural rod | 7.09e-09 | 52 |
future spinal cord | 7.09e-09 | 52 |
neural keel | 7.09e-09 | 52 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.49e-08 | 54 |
nervous system | 2.47e-08 | 75 |
Ammon's horn | 3.78e-08 | 7 |
lobe parts of cerebral cortex | 3.78e-08 | 7 |
hippocampal formation | 3.78e-08 | 7 |
limbic system | 3.78e-08 | 7 |
limbic lobe | 3.78e-08 | 7 |
regional part of cerebral cortex | 2.79e-07 | 17 |
neurectoderm | 3.12e-07 | 64 |
neural plate | 3.12e-07 | 64 |
presumptive neural plate | 3.12e-07 | 64 |