FFCP PHASE1:Mm9::chr11:107656055..107656069,-: Difference between revisions
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{{FFCP|EntrezGene=54377|HGNC=|MCL_coexpression_id=22|UniProt=Q9JJV4|association_with_transcript=-184bp_to_ENSMUST00000021066_5end|description=CAGE_peak_2_at_Cacng4_5end|id=chr11:107656055..107656069,-|ontology_enrichment_celltype=CL:0000540!8.72e-16!33;CL:0000047!8.72e-16!33;CL:0000031!8.72e-16!33;CL:0000404!8.72e-16!33;CL:0000117!3.30e-13!23;CL:0000337!3.30e-13!23;CL:0000221!4.05e-13!44;CL:0000133!4.05e-13!44;CL:0002319!9.31e-13!43;CL:0000393!7.26e-11!39;CL:0000211!7.26e-11!39;CL:0000055!1.19e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.50e-20,33;CL:0000047,6.50e-20,33;CL:0000031,6.50e-20,33;CL:0000404,6.50e-20,33;CL:0000117,1.14e-18,23;CL:0000337,1.14e-18,23;CL:0000221,5.08e-17,44;CL:0000133,5.08e-17,44;CL:0002319,2.06e-16,43;CL:0000393,1.40e-15,39;CL:0000211,1.40e-15,39;CL:0002609,3.16e-09,6;CL:0002321,1.45e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.60e-21!73;UBERON:0005743!1.60e-21!73;UBERON:0000073!1.43e-20!75;UBERON:0001016!1.43e-20!75;UBERON:0002346!1.95e-20!71;UBERON:0003075!1.95e-20!71;UBERON:0007284!1.95e-20!71;UBERON:0004121!2.73e-20!102;UBERON:0000924!2.73e-20!102;UBERON:0006601!2.73e-20!102;UBERON:0001049!9.25e-16!52;UBERON:0005068!9.25e-16!52;UBERON:0006241!9.25e-16!52;UBERON:0007135!9.25e-16!52;UBERON:0000033!1.44e-15!63;UBERON:0003056!2.95e-14!49;UBERON:0000955!6.28e-13!50;UBERON:0006238!6.28e-13!50;UBERON:0002616!2.08e-12!49;UBERON:0000153!2.31e-11!94;UBERON:0003080!3.68e-11!40;UBERON:0002780!8.57e-11!39;UBERON:0001890!8.57e-11!39;UBERON:0006240!8.57e-11!39;UBERON:0007811!3.96e-10!86;UBERON:0002020!2.80e-09!34;UBERON:0000468!1.68e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-22,73;UBERON:0001016,9.77e-22,75;UBERON:0004121,1.11e-21,95;UBERON:0000924,1.11e-21,95;UBERON:0006601,1.11e-21,95;UBERON:0002346,1.45e-21,64;UBERON:0003075,1.45e-21,64;UBERON:0007284,1.45e-21,64;UBERON:0010371,1.99e-19,73;UBERON:0000073,1.13e-15,54;UBERON:0001049,1.32e-15,52;UBERON:0005068,1.32e-15,52;UBERON:0006241,1.32e-15,52;UBERON:0007135,1.32e-15,52;UBERON:0003056,5.05e-15,49;UBERON:0010314,1.24e-13,92;UBERON:0000955,3.38e-12,47;UBERON:0006238,3.38e-12,47;UBERON:0003080,5.30e-12,40;UBERON:0002616,1.91e-11,46;UBERON:0002780,2.01e-11,39;UBERON:0001890,2.01e-11,39;UBERON:0006240,2.01e-11,39;UBERON:0002020,1.08e-10,34;UBERON:0000369,1.17e-07,5;UBERON:0002435,1.17e-07,5;UBERON:0000204,1.17e-07,5;UBERON:0010082,1.17e-07,5;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5;UBERON:0001894,5.54e-07,10;UBERON:0006222,5.54e-07,10|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0,0,0,0,0,0,0,0,0,9.5088736604011,2.11596391708813,4.43681982454325,0,0,0,0,0,3.59520132622086,5.37905627450176,6.73982480005105,6.75029691658453,6.73039876324422,4.28476476605705,3.97563373712904,6.1245399607477,5.94241920313065,4.5960939330501,0,1.0214987046815,0.921639199537461,8.70449499019279,6.22115976496386,5.73004707612436,0.837548997004143,0.56276261003168,1.37518422999129,6.18720029494702,2.84743361598206,9.13357284543973,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,1.19832511523858,1.83000241127451,9.5497307605777,0.869121600961382,0.511430914660661,1.87009240103604,2.10913641988085,0.611036183101898,0.124406970610093,0,0.210441855886474,0.520481771850815,1.83921683546778,1.80062129805349,1.20563854268572,1.63287597963187,1.66547836370305,2.34254311399322,0.776110112217047,1.29340795759705,0.189106080167819,0.175951124163949,1.31517439456545,0.834141747676794,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,5.86556290561921,0,0,0.426576501070468,0,0.902072229254653,1.21010114774006,0.667134131534611,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.456994050438915,0,0,0.775809948670503,0.210407459670956,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0,2.83957397474631,2.34263246577983,1.72338718186239,0.238968797952552,0.445597348164788,1.13230612315533,0.809621403349789,1.46127928955656,0.395287777946524,1.92792789853084,0.283880170416537,0.712262414669021,0.651547837414304,0.494910368917606,0,0,0,0,0.885905678642318,0,0.258428293168221,0,0,0,0,0,0.680879211507576,2.16073312837572,2.19909762430683,3.42939256050548,1.59606210278046,1.60531935841864,2.13913726782757,0.913394847343798,0,0.42366414172764,0.441056796109924,0,0,0.241251699712623,0.238744688006273,0.656563598980245,0,0.556275906031529,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,0.813277868507395,0.540026704109006,0,0.655087691238533,0.269728692769641,0,0,0,0,0,0.448549638131936,0.992750942742586,0.388902376688095,0.645799117388655,0.675824501963113,0.704143431874524,0.5208175393758,0.419437377702843,0,0.288030006257865,0,1.62180172232131,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0.295379054349154,0.403865799792591,0.381034033274999,0.604957110821043,0.194915761479505,0.384847366561318,0.233753804363138,0,0.443971906748129,0.448569283047378,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,0,0,0,0.207574695168353,1.99512436700516,1.36586884603307,1.21553358534147,0.838452650511929,2.02227859295016,0.666740183404846,0.824140228955577,0.320919209591815,1.51618327058278,1.52087579934144,1.32038438970253,1.03005658216871,0.89635213366817,1.66562859971278,2.38146845641537,2.43357084484197,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,2.14592570952589,1.0174249164263,1.03520318456864,0.930760686808441,1.46342378298218,0.263069711437843,0.950628796921032,0.561142271657738,1.18635018124174,1.87158516513571,0.409231043169689,0.619747364743864,1.35034627686799,2.99772693525535,1.87145286756327,1.07435527024149,0.382576664137687,0.220591419119515,0|short_description=p2@Cacng4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54377 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJV4 | |||
|association_with_transcript=-184bp_to_ENSMUST00000021066_5end | |||
|cluster_id=chr11:107656055..107656069,- | |||
|description=CAGE_peak_2_at_Cacng4_5end | |||
|id=chr11:107656055..107656069,- | |||
|ontology_enrichment_celltype=CL:0000540!8.72e-16!33;CL:0000047!8.72e-16!33;CL:0000031!8.72e-16!33;CL:0000404!8.72e-16!33;CL:0000117!3.30e-13!23;CL:0000337!3.30e-13!23;CL:0000221!4.05e-13!44;CL:0000133!4.05e-13!44;CL:0002319!9.31e-13!43;CL:0000393!7.26e-11!39;CL:0000211!7.26e-11!39;CL:0000055!1.19e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.50e-20,33;CL:0000047,6.50e-20,33;CL:0000031,6.50e-20,33;CL:0000404,6.50e-20,33;CL:0000117,1.14e-18,23;CL:0000337,1.14e-18,23;CL:0000221,5.08e-17,44;CL:0000133,5.08e-17,44;CL:0002319,2.06e-16,43;CL:0000393,1.40e-15,39;CL:0000211,1.40e-15,39;CL:0002609,3.16e-09,6;CL:0002321,1.45e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-21!73;UBERON:0005743!1.60e-21!73;UBERON:0000073!1.43e-20!75;UBERON:0001016!1.43e-20!75;UBERON:0002346!1.95e-20!71;UBERON:0003075!1.95e-20!71;UBERON:0007284!1.95e-20!71;UBERON:0004121!2.73e-20!102;UBERON:0000924!2.73e-20!102;UBERON:0006601!2.73e-20!102;UBERON:0001049!9.25e-16!52;UBERON:0005068!9.25e-16!52;UBERON:0006241!9.25e-16!52;UBERON:0007135!9.25e-16!52;UBERON:0000033!1.44e-15!63;UBERON:0003056!2.95e-14!49;UBERON:0000955!6.28e-13!50;UBERON:0006238!6.28e-13!50;UBERON:0002616!2.08e-12!49;UBERON:0000153!2.31e-11!94;UBERON:0003080!3.68e-11!40;UBERON:0002780!8.57e-11!39;UBERON:0001890!8.57e-11!39;UBERON:0006240!8.57e-11!39;UBERON:0007811!3.96e-10!86;UBERON:0002020!2.80e-09!34;UBERON:0000468!1.68e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-22,73;UBERON:0001016,9.77e-22,75;UBERON:0004121,1.11e-21,95;UBERON:0000924,1.11e-21,95;UBERON:0006601,1.11e-21,95;UBERON:0002346,1.45e-21,64;UBERON:0003075,1.45e-21,64;UBERON:0007284,1.45e-21,64;UBERON:0010371,1.99e-19,73;UBERON:0000073,1.13e-15,54;UBERON:0001049,1.32e-15,52;UBERON:0005068,1.32e-15,52;UBERON:0006241,1.32e-15,52;UBERON:0007135,1.32e-15,52;UBERON:0003056,5.05e-15,49;UBERON:0010314,1.24e-13,92;UBERON:0000955,3.38e-12,47;UBERON:0006238,3.38e-12,47;UBERON:0003080,5.30e-12,40;UBERON:0002616,1.91e-11,46;UBERON:0002780,2.01e-11,39;UBERON:0001890,2.01e-11,39;UBERON:0006240,2.01e-11,39;UBERON:0002020,1.08e-10,34;UBERON:0000369,1.17e-07,5;UBERON:0002435,1.17e-07,5;UBERON:0000204,1.17e-07,5;UBERON:0010082,1.17e-07,5;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5;UBERON:0001894,5.54e-07,10;UBERON:0006222,5.54e-07,10 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0,0,0,0,0,0,0,0,0,9.5088736604011,2.11596391708813,4.43681982454325,0,0,0,0,0,3.59520132622086,5.37905627450176,6.73982480005105,6.75029691658453,6.73039876324422,4.28476476605705,3.97563373712904,6.1245399607477,5.94241920313065,4.5960939330501,0,1.0214987046815,0.921639199537461,8.70449499019279,6.22115976496386,5.73004707612436,0.837548997004143,0.56276261003168,1.37518422999129,6.18720029494702,2.84743361598206,9.13357284543973,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,1.19832511523858,1.83000241127451,9.5497307605777,0.869121600961382,0.511430914660661,1.87009240103604,2.10913641988085,0.611036183101898,0.124406970610093,0,0.210441855886474,0.520481771850815,1.83921683546778,1.80062129805349,1.20563854268572,1.63287597963187,1.66547836370305,2.34254311399322,0.776110112217047,1.29340795759705,0.189106080167819,0.175951124163949,1.31517439456545,0.834141747676794,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,5.86556290561921,0,0,0.426576501070468,0,0.902072229254653,1.21010114774006,0.667134131534611,0.760902504450237,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.456994050438915,0,0,0.775809948670503,0.210407459670956,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0,2.83957397474631,2.34263246577983,1.72338718186239,0.238968797952552,0.445597348164788,1.13230612315533,0.809621403349789,1.46127928955656,0.395287777946524,1.92792789853084,0.283880170416537,0.712262414669021,0.651547837414304,0.494910368917606,0,0,0,0,0.885905678642318,0,0.258428293168221,0,0,0,0,0,0.680879211507576,2.16073312837572,2.19909762430683,3.42939256050548,1.59606210278046,1.60531935841864,2.13913726782757,0.913394847343798,0,0.42366414172764,0.441056796109924,0,0,0.241251699712623,0.238744688006273,0.656563598980245,0,0.556275906031529,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,0.813277868507395,0.540026704109006,0,0.655087691238533,0.269728692769641,0,0,0,0,0,0.448549638131936,0.992750942742586,0.388902376688095,0.645799117388655,0.675824501963113,0.704143431874524,0.5208175393758,0.419437377702843,0,0.288030006257865,0,1.62180172232131,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0.295379054349154,0.403865799792591,0.381034033274999,0.604957110821043,0.194915761479505,0.384847366561318,0.233753804363138,0,0.443971906748129,0.448569283047378,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,0,0,0,0.207574695168353,1.99512436700516,1.36586884603307,1.21553358534147,0.838452650511929,2.02227859295016,0.666740183404846,0.824140228955577,0.320919209591815,1.51618327058278,1.52087579934144,1.32038438970253,1.03005658216871,0.89635213366817,1.66562859971278,2.38146845641537,2.43357084484197,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,2.14592570952589,1.0174249164263,1.03520318456864,0.930760686808441,1.46342378298218,0.263069711437843,0.950628796921032,0.561142271657738,1.18635018124174,1.87158516513571,0.409231043169689,0.619747364743864,1.35034627686799,2.99772693525535,1.87145286756327,1.07435527024149,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@Cacng4 | |||
}} |
Revision as of 08:36, 5 August 2015
Short description: | p2@Cacng4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cacng4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -184bp_to_ENSMUST00000021066_5end |
EntrezGene: | 54377 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.50e-20 | 33 |
neuronal stem cell | 6.50e-20 | 33 |
neuroblast | 6.50e-20 | 33 |
electrically signaling cell | 6.50e-20 | 33 |
CNS neuron (sensu Vertebrata) | 1.14e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-18 | 23 |
ectodermal cell | 5.08e-17 | 44 |
neurectodermal cell | 5.08e-17 | 44 |
neural cell | 2.06e-16 | 43 |
electrically responsive cell | 1.40e-15 | 39 |
electrically active cell | 1.40e-15 | 39 |
neuron of cerebral cortex | 3.16e-09 | 6 |
embryonic cell | 1.45e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.06e-22 | 73 |
nervous system | 9.77e-22 | 75 |
ectoderm-derived structure | 1.11e-21 | 95 |
ectoderm | 1.11e-21 | 95 |
presumptive ectoderm | 1.11e-21 | 95 |
neurectoderm | 1.45e-21 | 64 |
neural plate | 1.45e-21 | 64 |
presumptive neural plate | 1.45e-21 | 64 |
ecto-epithelium | 1.99e-19 | 73 |
regional part of nervous system | 1.13e-15 | 54 |
neural tube | 1.32e-15 | 52 |
neural rod | 1.32e-15 | 52 |
future spinal cord | 1.32e-15 | 52 |
neural keel | 1.32e-15 | 52 |
pre-chordal neural plate | 5.05e-15 | 49 |
structure with developmental contribution from neural crest | 1.24e-13 | 92 |
brain | 3.38e-12 | 47 |
future brain | 3.38e-12 | 47 |
anterior neural tube | 5.30e-12 | 40 |
regional part of brain | 1.91e-11 | 46 |
regional part of forebrain | 2.01e-11 | 39 |
forebrain | 2.01e-11 | 39 |
future forebrain | 2.01e-11 | 39 |
gray matter | 1.08e-10 | 34 |
corpus striatum | 1.17e-07 | 5 |
striatum | 1.17e-07 | 5 |
ventral part of telencephalon | 1.17e-07 | 5 |
future corpus striatum | 1.17e-07 | 5 |
regional part of spinal cord | 1.25e-07 | 5 |
gray matter of spinal cord | 1.25e-07 | 5 |
diencephalon | 5.54e-07 | 10 |
future diencephalon | 5.54e-07 | 10 |