FFCP PHASE1:Mm9::chr15:77652903..77652912,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:77652903..77652912,+ to FFCP PHASE1:Mm9::chr15:77652903..77652912,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:77652903..77652912,+ | |||
|description=CAGE_peak_at_chr15:77652903..77652912,+ | |||
|id=chr15:77652903..77652912,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.21e-16!25;CL:0002563!1.16e-14!9;CL:0002251!1.16e-14!9;CL:0002076!6.54e-14!15;CL:0000223!1.09e-13!20;CL:0000239!5.79e-10!6;CL:0000677!5.79e-10!6;CL:0000212!5.79e-10!6;CL:0000584!5.79e-10!6;CL:0000075!2.24e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.56e-29,9;CL:0002251,3.56e-29,9;CL:0000066,1.83e-28,25;CL:0002250,2.00e-23,3;CL:0000223,4.63e-23,20;CL:0002076,1.81e-17,15;CL:0000239,2.58e-11,6;CL:0000677,2.58e-11,6;CL:0000584,2.58e-11,6;CL:0000682,1.98e-10,3;CL:0000075,8.77e-10,7;CL:0000057,6.23e-09,1;CL:0000632,6.23e-09,1;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000182,6.34e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.86e-16!15;UBERON:0003350!1.16e-14!9;UBERON:0004808!1.16e-14!9;UBERON:0001277!1.16e-14!9;UBERON:0001242!9.62e-14!13;UBERON:0000060!9.62e-14!13;UBERON:0001262!9.62e-14!13;UBERON:0004786!9.62e-14!13;UBERON:0001007!1.21e-11!128;UBERON:0001555!1.21e-11!128;UBERON:0007026!1.21e-11!128;UBERON:0000485!1.50e-11!11;UBERON:0004119!2.78e-11!130;UBERON:0000925!2.78e-11!130;UBERON:0006595!2.78e-11!130;UBERON:0004921!2.06e-10!126;UBERON:0004185!2.06e-10!126;UBERON:0004923!1.62e-08!24;UBERON:0000160!1.93e-08!43;UBERON:0005409!2.17e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.56e-29,9;UBERON:0004808,3.56e-29,9;UBERON:0001277,3.56e-29,9;UBERON:0000485,7.35e-24,11;UBERON:0001242,3.56e-20,13;UBERON:0001262,3.56e-20,13;UBERON:0004786,3.56e-20,13;UBERON:0000344,1.81e-17,15;UBERON:0003929,1.23e-12,55;UBERON:0004923,7.57e-11,24;UBERON:0000490,2.20e-10,66;UBERON:0005911,6.83e-10,69;UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0000160,2.43e-08,31 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0.60492842261366,0.500895729946347,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,1.14846392823004,1.29228598847722,0.861884930743556,0.190023419456374,0,0.443461021310609,0,0,0,6.64358725427932,1.82858109894342,9.39179038806898,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76823835312181,5.16254326188832,2.03991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.909998478779072,0.60492842261366,0.500895729946347,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,1.14846392823004,1.29228598847722,0.861884930743556,0.190023419456374,0,0.443461021310609,0,0,0,6.64358725427932,1.82858109894342,9.39179038806898,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76823835312181,5.16254326188832,2.03991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0,0,0.234690248288502,0,0,0,0.472905432318573,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:77652903..77652912,+ | |||
}} | }} |
Latest revision as of 13:47, 5 August 2015
Short description: | p@chr15:77652903..77652912, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:77652903..77652912, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.56e-29 | 9 |
epithelial cell of alimentary canal | 3.56e-29 | 9 |
epithelial cell | 1.83e-28 | 25 |
intestinal crypt stem cell | 2.00e-23 | 3 |
endodermal cell | 4.63e-23 | 20 |
endo-epithelial cell | 1.81e-17 | 15 |
brush border epithelial cell | 2.58e-11 | 6 |
gut absorptive cell | 2.58e-11 | 6 |
enterocyte | 2.58e-11 | 6 |
M cell of gut | 1.98e-10 | 3 |
columnar/cuboidal epithelial cell | 8.77e-10 | 7 |
fibroblast | 6.23e-09 | 1 |
hepatic stellate cell | 6.23e-09 | 1 |
lining cell | 7.41e-09 | 1 |
meso-epithelial cell | 7.41e-09 | 1 |
endothelial cell | 7.41e-09 | 1 |
endothelial cell of sinusoid | 7.41e-09 | 1 |
endothelial cell of hepatic sinusoid | 7.41e-09 | 1 |
hepatocyte | 6.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.56e-29 | 9 |
gastrointestinal system epithelium | 3.56e-29 | 9 |
intestinal epithelium | 3.56e-29 | 9 |
simple columnar epithelium | 7.35e-24 | 11 |
intestinal mucosa | 3.56e-20 | 13 |
wall of intestine | 3.56e-20 | 13 |
gastrointestinal system mucosa | 3.56e-20 | 13 |
mucosa | 1.81e-17 | 15 |
gut epithelium | 1.23e-12 | 55 |
organ component layer | 7.57e-11 | 24 |
unilaminar epithelium | 2.20e-10 | 66 |
endo-epithelium | 6.83e-10 | 69 |
bile duct | 7.41e-09 | 1 |
hepatic sinusoid | 7.41e-09 | 1 |
parenchyma | 7.41e-09 | 1 |
abdomen blood vessel | 7.41e-09 | 1 |
sinusoid | 7.41e-09 | 1 |
digestive system duct | 7.41e-09 | 1 |
abdominal segment blood vessel | 7.41e-09 | 1 |
trunk blood vessel | 7.41e-09 | 1 |
liver parenchyma | 7.41e-09 | 1 |
liver lobule | 7.41e-09 | 1 |
biliary system | 7.41e-09 | 1 |
biliary tree | 7.41e-09 | 1 |
biliary bud | 7.41e-09 | 1 |
hepatic duct | 7.41e-09 | 1 |
intestine | 2.43e-08 | 31 |