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FFCP PHASE1:Mm9::chr1:43010980..43010986,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2308
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:43010980..43010986,+
|description=CAGE_peak_at_chr1:43010980..43010986,+
|description=CAGE_peak_at_chr1:43010980..43010986,+
|id=chr1:43010980..43010986,+
|id=chr1:43010980..43010986,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.10e-19!71;UBERON:0003075!1.10e-19!71;UBERON:0007284!1.10e-19!71;UBERON:0003056!1.30e-18!49;UBERON:0000033!1.02e-17!63;UBERON:0003080!1.22e-16!40;UBERON:0001049!1.23e-16!52;UBERON:0005068!1.23e-16!52;UBERON:0006241!1.23e-16!52;UBERON:0007135!1.23e-16!52;UBERON:0001017!1.35e-16!73;UBERON:0005743!1.35e-16!73;UBERON:0000955!1.90e-16!50;UBERON:0006238!1.90e-16!50;UBERON:0002780!5.59e-16!39;UBERON:0001890!5.59e-16!39;UBERON:0006240!5.59e-16!39;UBERON:0002616!6.18e-16!49;UBERON:0000073!1.33e-15!75;UBERON:0001016!1.33e-15!75;UBERON:0004121!3.08e-14!102;UBERON:0000924!3.08e-14!102;UBERON:0006601!3.08e-14!102;UBERON:0000153!2.72e-13!94;UBERON:0007811!8.97e-12!86;UBERON:0002791!1.71e-10!29;UBERON:0003528!1.71e-10!29;UBERON:0001893!1.71e-10!29;UBERON:0002020!4.14e-10!34;UBERON:0000956!2.09e-09!21;UBERON:0001869!2.09e-09!21;UBERON:0000203!2.09e-09!21;UBERON:0002619!8.36e-07!17;UBERON:0001894!8.51e-07!10;UBERON:0006222!8.51e-07!10
|ontology_enrichment_uberon=UBERON:0002346!1.10e-19!71;UBERON:0003075!1.10e-19!71;UBERON:0007284!1.10e-19!71;UBERON:0003056!1.30e-18!49;UBERON:0000033!1.02e-17!63;UBERON:0003080!1.22e-16!40;UBERON:0001049!1.23e-16!52;UBERON:0005068!1.23e-16!52;UBERON:0006241!1.23e-16!52;UBERON:0007135!1.23e-16!52;UBERON:0001017!1.35e-16!73;UBERON:0005743!1.35e-16!73;UBERON:0000955!1.90e-16!50;UBERON:0006238!1.90e-16!50;UBERON:0002780!5.59e-16!39;UBERON:0001890!5.59e-16!39;UBERON:0006240!5.59e-16!39;UBERON:0002616!6.18e-16!49;UBERON:0000073!1.33e-15!75;UBERON:0001016!1.33e-15!75;UBERON:0004121!3.08e-14!102;UBERON:0000924!3.08e-14!102;UBERON:0006601!3.08e-14!102;UBERON:0000153!2.72e-13!94;UBERON:0007811!8.97e-12!86;UBERON:0002791!1.71e-10!29;UBERON:0003528!1.71e-10!29;UBERON:0001893!1.71e-10!29;UBERON:0002020!4.14e-10!34;UBERON:0000956!2.09e-09!21;UBERON:0001869!2.09e-09!21;UBERON:0000203!2.09e-09!21;UBERON:0002619!8.36e-07!17;UBERON:0001894!8.51e-07!10;UBERON:0006222!8.51e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.34e-21,47;UBERON:0006238,1.34e-21,47;UBERON:0002616,8.47e-21,46;UBERON:0003056,1.27e-20,49;UBERON:0003080,2.94e-20,40;UBERON:0002346,1.35e-19,64;UBERON:0003075,1.35e-19,64;UBERON:0007284,1.35e-19,64;UBERON:0002780,2.95e-19,39;UBERON:0001890,2.95e-19,39;UBERON:0006240,2.95e-19,39;UBERON:0001049,3.07e-19,52;UBERON:0005068,3.07e-19,52;UBERON:0006241,3.07e-19,52;UBERON:0007135,3.07e-19,52;UBERON:0001017,2.40e-17,73;UBERON:0000073,4.98e-17,54;UBERON:0010371,1.54e-16,73;UBERON:0001016,1.68e-16,75;UBERON:0004121,5.74e-14,95;UBERON:0000924,5.74e-14,95;UBERON:0006601,5.74e-14,95;UBERON:0010314,6.49e-12,92;UBERON:0003528,4.89e-11,29;UBERON:0002791,4.89e-11,29;UBERON:0001893,4.89e-11,29;UBERON:0001894,4.17e-10,10;UBERON:0006222,4.17e-10,10;UBERON:0000956,9.66e-10,21;UBERON:0001869,9.66e-10,21;UBERON:0000203,9.66e-10,21;UBERON:0002020,2.04e-09,34;UBERON:0000007,1.97e-08,8;UBERON:0003296,1.97e-08,8;UBERON:0010133,1.97e-08,8
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,1.30815093828268,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,5.80661828927475,10.3954572515402,4.83747411108179,0,0.662605622854841,2.69479758272899,4.12135525378416,0.919218786610021,0,0.766124028511126,0.614426133024974,0.395658863190582,0.914876436024097,1.04182674111352,1.3959149950069,0,1.22238598221448,0.589257170947335,0.711858403995515,1.3047961207771,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,2.08182392119363,0.913396434936424,0.922461989024234,0.452167921657868,0.470354828542819,0.628332956648377,0,0,0,0.323533699894818,0,0,1.86391761218122,1.17112318804619,0.41889341362691,0,0,0.599902730993408,0.127070227073065,3.14560342750128,4.11750542536764,3.01570445070875,3.12883776346098,3.3243009452943,2.90903262383384,1.78465389374533,0.203678727700633,4.47865094196335,17.4378703319236,0.210441855886474,2.86264974517948,0.689706313300419,0.900310649026746,1.05493372485001,1.42876648217788,2.0498195245576,0.749613796477831,1.03481348295606,2.58681591519411,2.08016688184601,1.23165786914764,0.876782929710299,1.11218899690239,0,1.4404749548556,0.796137067273973,0,0,0,0.414251545071004,1.40715635988658,0.180062061461015,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0,0.584799949701329,0,0,2.73376933133365,4.93942139420565,0,0,1.91959425481711,2.55460339046482,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0.199141273254367,2.84501851429623,2.51346727741403,3.38123207019241,1.83286195060783,2.32742984601151,0.771494018793504,0.505892296994058,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.234690248288502,0,0.714130922658041,0,0.630540576424764,0,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,1.05490517932983,0,0,1.26203287766503,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0.566153061577665,1.21443210502468,2.04579100537918,1.18586333383957,1.92792789853084,0.425820255624806,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,1.45668381692989,0.604647113929502,0.377210159511796,0,0.307435147943927,1.03371317267288,1.09060118843252,1.06949213515416,0.632073515871632,0,1.03135543248187,2.04263763452273,3.06103859853227,2.8458910432206,2.35770738534752,2.48276327099183,3.21063871683727,1.31639216481697,2.74018454203139,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0.341741761595705,0.619160603889667,0,0,0,0,0.679913719975421,0.839708713941948,0.414599921413271,0,1.42351197111511,0.609958401380546,0.540026704109006,0.627264888043406,2.18362563746178,1.61837215661785,1.23980183588004,1.04702376793612,0,0,0,0.448549638131936,0,0.388902376688095,0.645799117388655,0.675824501963113,0.469428954583016,0,0.209718688851422,0,0,0,2.63542779877213,3.18403967210964,1.81889152168913,1.07416017400489,0.596044064343795,0,0.590758108698309,0.100966449948148,0.15241361331,0.504130925684203,0.194915761479505,0,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0.428736758158132,0,1.6942555278512,3.22227665555024,3.43737308063638,1.71853182343688,0.685082519770642,3.0215755895588,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,2.90604573235695,0.798049746802062,1.53660245178721,1.70174701947806,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.943131706930381,0.468207537349412,0.576226371643824,0.631790158511746,0.476293691283074,0.695305955669133,0.964546102318525,1.23625770240992,0.441596760403192,1.02860775715625,1.06485483695602,1.43061713968393,1.0174249164263,1.2234219453993,1.18460451048347,0.914639864363863,1.31534855718921,0.950628796921032,0.561142271657738,0.474540072496697,0.492522411877817,0,0.929621047115796,0.771626443924566,0.499621155875892,1.16965804222704,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,1.30815093828268,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,5.80661828927475,10.3954572515402,4.83747411108179,0,0.662605622854841,2.69479758272899,4.12135525378416,0.919218786610021,0,0.766124028511126,0.614426133024974,0.395658863190582,0.914876436024097,1.04182674111352,1.3959149950069,0,1.22238598221448,0.589257170947335,0.711858403995515,1.3047961207771,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,2.08182392119363,0.913396434936424,0.922461989024234,0.452167921657868,0.470354828542819,0.628332956648377,0,0,0,0.323533699894818,0,0,1.86391761218122,1.17112318804619,0.41889341362691,0,0,0.599902730993408,0.127070227073065,3.14560342750128,4.11750542536764,3.01570445070875,3.12883776346098,3.3243009452943,2.90903262383384,1.78465389374533,0.203678727700633,4.47865094196335,17.4378703319236,0.210441855886474,2.86264974517948,0.689706313300419,0.900310649026746,1.05493372485001,1.42876648217788,2.0498195245576,0.749613796477831,1.03481348295606,2.58681591519411,2.08016688184601,1.23165786914764,0.876782929710299,1.11218899690239,0,1.4404749548556,0.796137067273973,0,0,0,0.414251545071004,1.40715635988658,0.180062061461015,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0,0.584799949701329,0,0,2.73376933133365,4.93942139420565,0,0,1.91959425481711,2.55460339046482,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0.199141273254367,2.84501851429623,2.51346727741403,3.38123207019241,1.83286195060783,2.32742984601151,0.771494018793504,0.505892296994058,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.234690248288502,0,0.714130922658041,0,0.630540576424764,0,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,1.05490517932983,0,0,1.26203287766503,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0.566153061577665,1.21443210502468,2.04579100537918,1.18586333383957,1.92792789853084,0.425820255624806,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,1.45668381692989,0.604647113929502,0.377210159511796,0,0.307435147943927,1.03371317267288,1.09060118843252,1.06949213515416,0.632073515871632,0,1.03135543248187,2.04263763452273,3.06103859853227,2.8458910432206,2.35770738534752,2.48276327099183,3.21063871683727,1.31639216481697,2.74018454203139,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0.341741761595705,0.619160603889667,0,0,0,0,0.679913719975421,0.839708713941948,0.414599921413271,0,1.42351197111511,0.609958401380546,0.540026704109006,0.627264888043406,2.18362563746178,1.61837215661785,1.23980183588004,1.04702376793612,0,0,0,0.448549638131936,0,0.388902376688095,0.645799117388655,0.675824501963113,0.469428954583016,0,0.209718688851422,0,0,0,2.63542779877213,3.18403967210964,1.81889152168913,1.07416017400489,0.596044064343795,0,0.590758108698309,0.100966449948148,0.15241361331,0.504130925684203,0.194915761479505,0,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0.428736758158132,0,1.6942555278512,3.22227665555024,3.43737308063638,1.71853182343688,0.685082519770642,3.0215755895588,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,2.90604573235695,0.798049746802062,1.53660245178721,1.70174701947806,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.943131706930381,0.468207537349412,0.576226371643824,0.631790158511746,0.476293691283074,0.695305955669133,0.964546102318525,1.23625770240992,0.441596760403192,1.02860775715625,1.06485483695602,1.43061713968393,1.0174249164263,1.2234219453993,1.18460451048347,0.914639864363863,1.31534855718921,0.950628796921032,0.561142271657738,0.474540072496697,0.492522411877817,0,0.929621047115796,0.771626443924566,0.499621155875892,1.16965804222704,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p@chr1:43010980..43010986,+
|short_description=p@chr1:43010980..43010986,+
}}
}}

Latest revision as of 16:25, 5 August 2015

Short description:p@chr1:43010980..43010986, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:43010980..43010986, +
Coexpression cluster:MCL_coexpression_mm9:2308
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr1:43010980..43010986+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain1.34e-2147
future brain1.34e-2147
regional part of brain8.47e-2146
pre-chordal neural plate1.27e-2049
anterior neural tube2.94e-2040
neurectoderm1.35e-1964
neural plate1.35e-1964
presumptive neural plate1.35e-1964
regional part of forebrain2.95e-1939
forebrain2.95e-1939
future forebrain2.95e-1939
neural tube3.07e-1952
neural rod3.07e-1952
future spinal cord3.07e-1952
neural keel3.07e-1952
central nervous system2.40e-1773
regional part of nervous system4.98e-1754
ecto-epithelium1.54e-1673
nervous system1.68e-1675
ectoderm-derived structure5.74e-1495
ectoderm5.74e-1495
presumptive ectoderm5.74e-1495
structure with developmental contribution from neural crest6.49e-1292
brain grey matter4.89e-1129
regional part of telencephalon4.89e-1129
telencephalon4.89e-1129
diencephalon4.17e-1010
future diencephalon4.17e-1010
cerebral cortex9.66e-1021
cerebral hemisphere9.66e-1021
pallium9.66e-1021
gray matter2.04e-0934
pituitary gland1.97e-088
gland of diencephalon1.97e-088
neuroendocrine gland1.97e-088
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