Personal tools

FFCP PHASE1:Mm9::chr6:40996879..40996890,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-448bp_to_uc009bnp.1,uc012eki.1_5end
|association_with_transcript=-448bp_to_uc009bnp.1,uc012eki.1_5end
|cluster_id=chr6:40996879..40996890,+
|description=CAGE_peak_5_at_uc009bnp.1_5end,CAGE_peak_5_at_uc012eki.1_5end
|description=CAGE_peak_5_at_uc009bnp.1_5end,CAGE_peak_5_at_uc012eki.1_5end
|id=chr6:40996879..40996890,+
|id=chr6:40996879..40996890,+
|ontology_enrichment_celltype=CL:0000791!5.24e-26!9;CL:0000789!5.24e-26!9;CL:0002420!5.24e-26!9;CL:0002419!5.24e-26!9;CL:0000790!5.24e-26!9;CL:0000624!2.21e-23!8;CL:0000084!5.31e-21!11;CL:0000827!5.31e-21!11;CL:0000838!4.01e-19!12;CL:0000893!7.74e-18!6;CL:0002489!7.74e-18!6;CL:0000898!7.74e-18!6;CL:0000809!7.74e-18!6;CL:0000810!7.74e-18!6;CL:0000895!7.74e-18!6;CL:0000808!7.74e-18!6;CL:0000894!7.74e-18!6;CL:0000806!7.74e-18!6;CL:0000807!7.74e-18!6;CL:0000805!7.74e-18!6;CL:0002425!7.74e-18!6;CL:0002436!7.74e-18!6;CL:0002427!7.74e-18!6;CL:0002428!7.74e-18!6;CL:0002429!7.74e-18!6;CL:0002433!7.74e-18!6;CL:0002431!7.74e-18!6;CL:0002432!7.74e-18!6;CL:0000542!1.56e-17!13;CL:0000051!1.56e-17!13;CL:0000738!4.81e-13!17;CL:0002087!4.81e-13!17;CL:0002031!2.23e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000624,3.28e-22,8;CL:0000893,1.17e-20,6;CL:0002489,1.17e-20,6;CL:0000898,1.17e-20,6;CL:0000809,1.17e-20,6;CL:0000810,1.17e-20,6;CL:0000895,1.17e-20,6;CL:0000808,1.17e-20,6;CL:0000894,1.17e-20,6;CL:0000806,1.17e-20,6;CL:0000807,1.17e-20,6;CL:0000805,1.17e-20,6;CL:0002425,1.17e-20,6;CL:0002436,1.17e-20,6;CL:0002427,1.17e-20,6;CL:0002428,1.17e-20,6;CL:0002429,1.17e-20,6;CL:0002433,1.17e-20,6;CL:0002431,1.17e-20,6;CL:0002432,1.17e-20,6;CL:0000791,1.03e-19,9;CL:0000789,1.03e-19,9;CL:0002420,1.03e-19,9;CL:0002419,1.03e-19,9;CL:0000790,1.03e-19,9;CL:0000084,4.46e-16,11;CL:0000827,4.46e-16,11;CL:0000838,1.03e-14,12;CL:0000542,1.48e-13,13;CL:0000051,1.48e-13,13;CL:0000738,2.78e-10,17;CL:0002087,2.78e-10,17;CL:0002031,7.26e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!6.24e-46!23;UBERON:0000974!6.24e-46!23;UBERON:0004807!6.24e-46!23;UBERON:0005058!6.24e-46!23;UBERON:0003351!6.24e-46!23;UBERON:0009113!6.24e-46!23;UBERON:0003295!6.24e-46!23;UBERON:0009722!6.24e-46!23;UBERON:0005562!6.24e-46!23;UBERON:0007690!6.24e-46!23;UBERON:0006562!7.51e-44!24;UBERON:0003408!7.51e-44!24;UBERON:0001557!7.51e-44!24;UBERON:0001042!7.51e-44!24;UBERON:0008814!7.51e-44!24;UBERON:0009145!7.51e-44!24;UBERON:0004177!1.82e-43!29;UBERON:0000072!1.56e-38!27;UBERON:0000065!2.06e-32!41;UBERON:0001004!1.56e-31!42;UBERON:0000063!8.43e-29!35;UBERON:0002193!4.55e-27!48;UBERON:0002390!1.84e-26!45;UBERON:0003061!1.84e-26!45;UBERON:0005057!7.84e-23!51;UBERON:0005911!2.05e-17!69;UBERON:0002405!3.96e-17!70;UBERON:0003929!7.60e-17!55;UBERON:0002368!4.22e-15!60;UBERON:0001041!1.27e-14!92;UBERON:0003081!4.83e-14!88;UBERON:0002530!1.26e-13!65;UBERON:0000077!1.29e-13!97;UBERON:0000490!2.34e-13!66;UBERON:0000949!6.63e-12!72;UBERON:0000064!9.16e-11!99;UBERON:0004921!2.36e-09!126;UBERON:0004185!2.36e-09!126;UBERON:0007811!2.63e-09!86;UBERON:0000153!3.08e-09!94;UBERON:0001007!3.95e-09!128;UBERON:0001555!3.95e-09!128;UBERON:0007026!3.95e-09!128;UBERON:0004119!6.50e-09!130;UBERON:0000925!6.50e-09!130;UBERON:0006595!6.50e-09!130;UBERON:0003104!8.28e-09!131;UBERON:0009142!8.28e-09!131;UBERON:0000477!1.87e-08!154;UBERON:0001048!3.42e-08!147
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.06e-56,23;UBERON:0000974,4.06e-56,23;UBERON:0004807,4.06e-56,23;UBERON:0005058,4.06e-56,23;UBERON:0003351,4.06e-56,23;UBERON:0009113,4.06e-56,23;UBERON:0003295,4.06e-56,23;UBERON:0009722,4.06e-56,23;UBERON:0005562,4.06e-56,23;UBERON:0007690,4.06e-56,23;UBERON:0006562,1.05e-53,24;UBERON:0003408,1.05e-53,24;UBERON:0001557,1.05e-53,24;UBERON:0001042,1.05e-53,24;UBERON:0008814,1.05e-53,24;UBERON:0009145,1.05e-53,24;UBERON:0000072,1.52e-47,27;UBERON:0004177,3.85e-44,29;UBERON:0005057,3.85e-44,29;UBERON:0000077,2.91e-36,35;UBERON:0007811,3.33e-35,36;UBERON:0000065,1.11e-30,41;UBERON:0001004,6.60e-30,42;UBERON:0000153,3.62e-29,43;UBERON:0002390,8.71e-28,45;UBERON:0003061,8.71e-28,45;UBERON:0002193,6.26e-26,48;UBERON:0002405,6.26e-26,48;UBERON:0003929,2.21e-22,55;UBERON:0002368,2.37e-20,60;UBERON:0002530,1.24e-18,65;UBERON:0000490,2.56e-18,66;UBERON:0005911,1.96e-17,69;UBERON:0000949,1.27e-16,72;UBERON:0001041,9.39e-15,80;UBERON:0003081,2.13e-13,87;UBERON:0004921,1.03e-09,114;UBERON:0001007,1.66e-09,116;UBERON:0001555,1.66e-09,116;UBERON:0007026,1.66e-09,116;UBERON:0004119,2.62e-09,118;UBERON:0000925,2.62e-09,118;UBERON:0006595,2.62e-09,118;UBERON:0000926,4.08e-09,120;UBERON:0004120,4.08e-09,120;UBERON:0006603,4.08e-09,120;UBERON:0001048,6.30e-08,134
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,1.12630977721333,1.63845168425395,1.19852577757853,0.319088635981346,2.05440875917447,2.01066925563694,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10814456816632,0,0.102710957164827,0.389762468933385,1.25318686967237,2.38417625737518,2.88469078847925,3.10148007066612,3.02899349844443,2.057583779685,2.01652370273681,2.72882066071307,4.13710919053417,2.45441494581295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,1.12630977721333,1.63845168425395,1.19852577757853,0.319088635981346,2.05440875917447,2.01066925563694,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10814456816632,0,0.102710957164827,0.389762468933385,1.25318686967237,2.38417625737518,2.88469078847925,3.10148007066612,3.02899349844443,2.057583779685,2.01652370273681,2.72882066071307,4.13710919053417,2.45441494581295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p5@uc009bnp.1,p5@uc012eki.1
|short_description=p5@uc009bnp.1,p5@uc012eki.1
}}
}}

Latest revision as of 17:07, 5 August 2015

Short description:p5@uc009bnp.1, p5@uc012eki.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_uc009bnp.1_5end, CAGE_peak_5_at_uc012eki.1_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -448bp_to_uc009bnp.1, uc012eki.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:40996879..40996890,%2B&oldid=3923091"