Personal tools

FFCP PHASE1:Mm9::chr3:107467992..107468037,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:107467992..107468037,-
|description=CAGE_peak_at_chr3:107467992..107468037,-
|description=CAGE_peak_at_chr3:107467992..107468037,-
|id=chr3:107467992..107468037,-
|id=chr3:107467992..107468037,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-09,23;CL:0000337,1.92e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.25e-09!34;UBERON:0001049!5.53e-08!52;UBERON:0005068!5.53e-08!52;UBERON:0006241!5.53e-08!52;UBERON:0007135!5.53e-08!52;UBERON:0000955!3.91e-07!50;UBERON:0006238!3.91e-07!50;UBERON:0002616!6.19e-07!49;UBERON:0002791!7.43e-07!29;UBERON:0003528!7.43e-07!29;UBERON:0001893!7.43e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-14,54;UBERON:0002020,2.10e-13,34;UBERON:0001049,3.72e-12,52;UBERON:0005068,3.72e-12,52;UBERON:0006241,3.72e-12,52;UBERON:0007135,3.72e-12,52;UBERON:0001017,1.19e-11,73;UBERON:0001016,3.95e-11,75;UBERON:0002021,1.05e-10,10;UBERON:0000411,1.05e-10,10;UBERON:0001950,1.05e-10,10;UBERON:0002240,2.40e-09,6;UBERON:0005174,2.40e-09,6;UBERON:0001137,2.40e-09,6;UBERON:0002346,1.14e-08,64;UBERON:0003075,1.14e-08,64;UBERON:0007284,1.14e-08,64;UBERON:0001948,2.19e-08,5;UBERON:0002315,2.19e-08,5;UBERON:0003528,2.59e-08,29;UBERON:0002791,2.59e-08,29;UBERON:0001893,2.59e-08,29;UBERON:0004121,5.75e-08,95;UBERON:0000924,5.75e-08,95;UBERON:0006601,5.75e-08,95;UBERON:0010371,1.13e-07,73;UBERON:0003076,2.60e-07,12;UBERON:0003057,2.60e-07,12;UBERON:0002616,3.14e-07,46;UBERON:0002780,3.88e-07,39;UBERON:0001890,3.88e-07,39;UBERON:0006240,3.88e-07,39;UBERON:0002619,5.40e-07,17;UBERON:0000955,5.57e-07,47;UBERON:0006238,5.57e-07,47;UBERON:0003080,7.35e-07,40
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0.129123323441576,0.281577444303333,0,0.34243593645101,0.159544317990673,0.171200729931206,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.397163804803541,0.261199789138935,0.47997726838022,1.14704640533585,1.14846392823004,0.86152399231815,1.07735616342945,0.190023419456374,0.252030129759931,0,0,0,0,1.44425809875637,0.498703936075477,1.63335485009895,0,0,0,0.588231488031014,0,0,0.503587271902309,0,0.367093504323363,0,0,0.439372365468944,0.972149495371417,0.839918529752175,0,0.335565212115473,0,0,0.257259436035947,0.286533439938757,0.515672092277442,1.01158230429799,0,1.26766280701236,0,0,1.3498495759221,0,0,0,0,0.725827286159344,0.405017814995072,0.210324961351382,2.85650984403804,1.32521124570968,0.244981598429908,0.670918297127655,0,8.8092704799511,3.70293280447044,6.45147439676223,0.527545150920775,0.182975287204819,0,2.79182999001381,1.12552522006336,2.59757021220577,4.12480019663135,1.42371680799103,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.779358013808606,0,1.54927761754349,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.68510327831436,0,0,0.520455980298408,0.913396434936424,0.230615497256059,0.452167921657868,0.23517741427141,1.0053327306374,0,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0.11981512450592,0,0,0.149790639404823,1.37250180845588,0.376963056338593,1.04294592115366,2.04572365864264,1.24672826735736,1.29793010454206,0.407357455401265,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.465067889500816,0,0.116765342367169,0,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,0.308713837137853,4.29544417878937,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.864552199498777,0.597423819763102,0,0.799739588268102,0,0,0.581857461502877,0.210407459670956,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0,0.287696137450811,0.810676133875177,0.823684239564244,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0,0,0,0.54390568381871,0.491764273019036,0.275936746304732,1.76605648986571,1.17211686592203,1.14754461763673,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.642642632843614,0,0.712262414669021,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,1.03371317267288,0.363533729477506,1.06949213515416,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0.228778173206523,0,0.139951452323658,0,3.81868247206045,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.655087691238533,0.269728692769641,0.495920734352016,1.04702376793612,0.648074866458964,0,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0.675824501963113,0.352071715937262,0,0.209718688851422,0.724752362478018,0.288030006257865,0.948033361884535,0.202725215290164,0.513554785824136,0.389762468933385,0,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.233753804363138,0.226730383615211,0.665957860122194,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,3.95326289831947,1.84130094602871,2.29158205375759,2.06223818812425,5.48066015816514,3.0215755895588,4.05013500139084,0.900642406448441,0.453142408984205,2.5888015587591,1.24544817101012,0,0,0,0.419226325255965,1.2869045591501,0.44449345560323,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.188626341386076,0.37456602987953,0.448176066834085,0.17230640686684,0.952587382566147,0.927074607558844,0.578727661391115,1.23625770240992,0.588795680537589,2.40008476669791,1.59728225543404,1.1921809497366,0.581385666529314,1.12931256498397,0.507687647350059,0.548783918618318,0.526139422875686,0.814824683075171,2.80571135828869,0.355905054372522,0.29551344712669,2.04615521584845,0.929621047115796,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0.129123323441576,0.281577444303333,0,0.34243593645101,0.159544317990673,0.171200729931206,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.397163804803541,0.261199789138935,0.47997726838022,1.14704640533585,1.14846392823004,0.86152399231815,1.07735616342945,0.190023419456374,0.252030129759931,0,0,0,0,1.44425809875637,0.498703936075477,1.63335485009895,0,0,0,0.588231488031014,0,0,0.503587271902309,0,0.367093504323363,0,0,0.439372365468944,0.972149495371417,0.839918529752175,0,0.335565212115473,0,0,0.257259436035947,0.286533439938757,0.515672092277442,1.01158230429799,0,1.26766280701236,0,0,1.3498495759221,0,0,0,0,0.725827286159344,0.405017814995072,0.210324961351382,2.85650984403804,1.32521124570968,0.244981598429908,0.670918297127655,0,8.8092704799511,3.70293280447044,6.45147439676223,0.527545150920775,0.182975287204819,0,2.79182999001381,1.12552522006336,2.59757021220577,4.12480019663135,1.42371680799103,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.779358013808606,0,1.54927761754349,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.68510327831436,0,0,0.520455980298408,0.913396434936424,0.230615497256059,0.452167921657868,0.23517741427141,1.0053327306374,0,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0.11981512450592,0,0,0.149790639404823,1.37250180845588,0.376963056338593,1.04294592115366,2.04572365864264,1.24672826735736,1.29793010454206,0.407357455401265,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.465067889500816,0,0.116765342367169,0,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,0.308713837137853,4.29544417878937,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.864552199498777,0.597423819763102,0,0.799739588268102,0,0,0.581857461502877,0.210407459670956,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0,0.287696137450811,0.810676133875177,0.823684239564244,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0,0,0,0.54390568381871,0.491764273019036,0.275936746304732,1.76605648986571,1.17211686592203,1.14754461763673,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.642642632843614,0,0.712262414669021,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,1.03371317267288,0.363533729477506,1.06949213515416,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0.658196082408484,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0.228778173206523,0,0.139951452323658,0,3.81868247206045,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.655087691238533,0.269728692769641,0.495920734352016,1.04702376793612,0.648074866458964,0,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0.675824501963113,0.352071715937262,0,0.209718688851422,0.724752362478018,0.288030006257865,0.948033361884535,0.202725215290164,0.513554785824136,0.389762468933385,0,0,0,0,0.100966449948148,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.233753804363138,0.226730383615211,0.665957860122194,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,3.95326289831947,1.84130094602871,2.29158205375759,2.06223818812425,5.48066015816514,3.0215755895588,4.05013500139084,0.900642406448441,0.453142408984205,2.5888015587591,1.24544817101012,0,0,0,0.419226325255965,1.2869045591501,0.44449345560323,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.188626341386076,0.37456602987953,0.448176066834085,0.17230640686684,0.952587382566147,0.927074607558844,0.578727661391115,1.23625770240992,0.588795680537589,2.40008476669791,1.59728225543404,1.1921809497366,0.581385666529314,1.12931256498397,0.507687647350059,0.548783918618318,0.526139422875686,0.814824683075171,2.80571135828869,0.355905054372522,0.29551344712669,2.04615521584845,0.929621047115796,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p@chr3:107467992..107468037,-
|short_description=p@chr3:107467992..107468037,-
}}
}}

Latest revision as of 20:31, 5 August 2015

Short description:p@chr3:107467992..107468037, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:107467992..107468037, -
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:107467992..107468037-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.92e-0923
neuroblast (sensu Vertebrata)1.92e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.20e-1454
gray matter2.10e-1334
neural tube3.72e-1252
neural rod3.72e-1252
future spinal cord3.72e-1252
neural keel3.72e-1252
central nervous system1.19e-1173
nervous system3.95e-1175
occipital lobe1.05e-1010
visual cortex1.05e-1010
neocortex1.05e-1010
spinal cord2.40e-096
dorsal region element2.40e-096
dorsum2.40e-096
neurectoderm1.14e-0864
neural plate1.14e-0864
presumptive neural plate1.14e-0864
regional part of spinal cord2.19e-085
gray matter of spinal cord2.19e-085
brain grey matter2.59e-0829
regional part of telencephalon2.59e-0829
telencephalon2.59e-0829
ectoderm-derived structure5.75e-0895
ectoderm5.75e-0895
presumptive ectoderm5.75e-0895
ecto-epithelium1.13e-0773
posterior neural tube2.60e-0712
chordal neural plate2.60e-0712
regional part of brain3.14e-0746
regional part of forebrain3.88e-0739
forebrain3.88e-0739
future forebrain3.88e-0739
regional part of cerebral cortex5.40e-0717
brain5.57e-0747
future brain5.57e-0747
anterior neural tube7.35e-0740
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:107467992..107468037,-&oldid=3938998"