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FFCP PHASE1:Mm9::chr3:130892189..130892194,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:130892189..130892194,+
|description=CAGE_peak_at_chr3:130892189..130892194,+
|description=CAGE_peak_at_chr3:130892189..130892194,+
|id=chr3:130892189..130892194,+
|id=chr3:130892189..130892194,+
|ontology_enrichment_celltype=CL:0000791!3.31e-07!9;CL:0000789!3.31e-07!9;CL:0002420!3.31e-07!9;CL:0002419!3.31e-07!9;CL:0000790!3.31e-07!9
|ontology_enrichment_celltype=CL:0000791!3.31e-07!9;CL:0000789!3.31e-07!9;CL:0002420!3.31e-07!9;CL:0002419!3.31e-07!9;CL:0000790!3.31e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,1.13e-11,9;CL:0000789,1.13e-11,9;CL:0002420,1.13e-11,9;CL:0002419,1.13e-11,9;CL:0000790,1.13e-11,9;CL:0000624,5.17e-10,8;CL:0000084,3.19e-09,11;CL:0000827,3.19e-09,11;CL:0000838,2.64e-08,12;CL:0000542,1.56e-07,13;CL:0000051,1.56e-07,13;CL:0002031,5.26e-07,25;CL:0000893,5.42e-07,6;CL:0002489,5.42e-07,6;CL:0000898,5.42e-07,6;CL:0000809,5.42e-07,6;CL:0000810,5.42e-07,6;CL:0000895,5.42e-07,6;CL:0000808,5.42e-07,6;CL:0000894,5.42e-07,6;CL:0000806,5.42e-07,6;CL:0000807,5.42e-07,6;CL:0000805,5.42e-07,6;CL:0002425,5.42e-07,6;CL:0002436,5.42e-07,6;CL:0002427,5.42e-07,6;CL:0002428,5.42e-07,6;CL:0002429,5.42e-07,6;CL:0002433,5.42e-07,6;CL:0002431,5.42e-07,6;CL:0002432,5.42e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!1.08e-13!42;UBERON:0000065!1.87e-13!41;UBERON:0003408!3.54e-13!24;UBERON:0006562!4.96e-13!24;UBERON:0001557!4.96e-13!24;UBERON:0001042!4.96e-13!24;UBERON:0008814!4.96e-13!24;UBERON:0009145!4.96e-13!24;UBERON:0002370!5.24e-13!23;UBERON:0000974!5.24e-13!23;UBERON:0004807!5.24e-13!23;UBERON:0005058!5.24e-13!23;UBERON:0003351!5.24e-13!23;UBERON:0009113!5.24e-13!23;UBERON:0003295!5.24e-13!23;UBERON:0009722!5.24e-13!23;UBERON:0005562!5.24e-13!23;UBERON:0007690!5.24e-13!23;UBERON:0004177!2.28e-12!29;UBERON:0000072!2.87e-10!27;UBERON:0002390!1.70e-07!45;UBERON:0003061!1.70e-07!45;UBERON:0002193!5.37e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.83e-24,23;UBERON:0000974,2.83e-24,23;UBERON:0004807,2.83e-24,23;UBERON:0005058,2.83e-24,23;UBERON:0003351,2.83e-24,23;UBERON:0009113,2.83e-24,23;UBERON:0003295,2.83e-24,23;UBERON:0009722,2.83e-24,23;UBERON:0005562,2.83e-24,23;UBERON:0007690,2.83e-24,23;UBERON:0006562,5.15e-23,24;UBERON:0003408,5.15e-23,24;UBERON:0001557,5.15e-23,24;UBERON:0001042,5.15e-23,24;UBERON:0008814,5.15e-23,24;UBERON:0009145,5.15e-23,24;UBERON:0004177,5.67e-20,29;UBERON:0005057,5.67e-20,29;UBERON:0000072,8.41e-20,27;UBERON:0002390,4.08e-16,45;UBERON:0003061,4.08e-16,45;UBERON:0002193,6.09e-16,48;UBERON:0002405,6.09e-16,48;UBERON:0000153,8.19e-16,43;UBERON:0000077,1.65e-15,35;UBERON:0007811,5.79e-15,36;UBERON:0000065,6.44e-15,41;UBERON:0001004,2.07e-14,42;UBERON:0003081,1.48e-10,87;UBERON:0000926,1.36e-08,120;UBERON:0004120,1.36e-08,120;UBERON:0006603,1.36e-08,120;UBERON:0000014,6.80e-08,5;UBERON:0001003,6.80e-08,5;UBERON:0002097,6.80e-08,5;UBERON:0002199,6.80e-08,5;UBERON:0007029,6.80e-08,5;UBERON:0007376,6.80e-08,5;UBERON:0002416,6.80e-08,5;UBERON:0007383,6.80e-08,5;UBERON:0003929,7.78e-08,55;UBERON:0005911,3.34e-07,69;UBERON:0002368,9.56e-07,60
|phase1_expression=1.44133962394315,0,0,0,0,0,0,4.77756296733832,2.67498572088167,2.34064526321993,1.19852577757853,0.797721589953364,7.36163138704185,9.9659258757657,0.333109761815663,1.21485160433896,0,1.10411757875383,2.05671650408608,2.12194825899015,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,11.6057942721815,11.7632829699862,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0,0,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,5.09610479413291,0,0,0,0,0.68510327831436,1.03575153458869,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,1.10420759230197,1.93950101254089,0,0.292780797011547,0,0,0,0,0,1.19832511523858,0,0,0,0,0.83115217823824,0.162241263067758,0.101839363850316,1.24406970610093,2.77995034277042,0,0.520481771850815,0.229902104433473,0,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0.945530400839096,1.58356011747554,0.657587197282725,2.22437799380478,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,0,0.514523061896422,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,2.25415471346161,0.610953983535943,0.193952487167626,0.631222379012867,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0.863088412352432,0.810676133875177,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0.947457058852424,0.325929952884052,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0.780534591431195,0.788175720530955,0.664394068946325,0.159454768657487,1.3109065177259,0.518054945597687,1.01254341007058,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0,0.704015124191131,0,0,1.15420377059036,2.74489525383039,1.44751019827574,3.22305328808468,2.62625439592098,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,1.23024804948923,0.457556346413045,0.169978429993855,0.559805809294632,0.276399947608848,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0,0.621339313086926,1.12738587736838,0.149516546043979,0.496375471371293,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,1.69108884578204,1.15212002503146,6.63623353319174,0.810900861160657,2.2596410576262,6.75588279484534,8.05620130503666,6.35780335300048,8.65407236543776,11.519783119617,8.07731599585181,7.16343982556999,11.1917065501893,9.06358290879698,8.27421838106833,8.6488907614361,0.453460767230423,0,0,0,0.19318959403219,0,0.549454872801795,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.798049746802062,0.341467211508268,0.972426868273176,0,0.183843508450014,0.666740183404846,1.03017528619447,0.64183841918363,2.02157769411038,0.760437899670719,0.377252682772152,0.842773567228942,0.576226371643824,0.459483751644906,0.952587382566147,0.579421629724277,0.38581844092741,0.824171801606613,0.441596760403192,1.71434626192708,0.532427418478012,0.238436189947321,1.0174249164263,0.470546902076653,1.18460451048347,0.914639864363863,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.689531376628944,0,0.77468420592983,0.771626443924566,0.499621155875892,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|phase1_expression=1.44133962394315,0,0,0,0,0,0,4.77756296733832,2.67498572088167,2.34064526321993,1.19852577757853,0.797721589953364,7.36163138704185,9.9659258757657,0.333109761815663,1.21485160433896,0,1.10411757875383,2.05671650408608,2.12194825899015,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,11.6057942721815,11.7632829699862,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0,0,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,5.09610479413291,0,0,0,0,0.68510327831436,1.03575153458869,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,1.10420759230197,1.93950101254089,0,0.292780797011547,0,0,0,0,0,1.19832511523858,0,0,0,0,0.83115217823824,0.162241263067758,0.101839363850316,1.24406970610093,2.77995034277042,0,0.520481771850815,0.229902104433473,0,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0.945530400839096,1.58356011747554,0.657587197282725,2.22437799380478,0.348252166522167,1.23469281844766,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,0,0.514523061896422,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,2.25415471346161,0.610953983535943,0.193952487167626,0.631222379012867,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0.863088412352432,0.810676133875177,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0.947457058852424,0.325929952884052,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0.780534591431195,0.788175720530955,0.664394068946325,0.159454768657487,1.3109065177259,0.518054945597687,1.01254341007058,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.651547837414304,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0,0.704015124191131,0,0,1.15420377059036,2.74489525383039,1.44751019827574,3.22305328808468,2.62625439592098,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,1.23024804948923,0.457556346413045,0.169978429993855,0.559805809294632,0.276399947608848,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0,0.621339313086926,1.12738587736838,0.149516546043979,0.496375471371293,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.104859344425711,1.69108884578204,1.15212002503146,6.63623353319174,0.810900861160657,2.2596410576262,6.75588279484534,8.05620130503666,6.35780335300048,8.65407236543776,11.519783119617,8.07731599585181,7.16343982556999,11.1917065501893,9.06358290879698,8.27421838106833,8.6488907614361,0.453460767230423,0,0,0,0.19318959403219,0,0.549454872801795,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.798049746802062,0.341467211508268,0.972426868273176,0,0.183843508450014,0.666740183404846,1.03017528619447,0.64183841918363,2.02157769411038,0.760437899670719,0.377252682772152,0.842773567228942,0.576226371643824,0.459483751644906,0.952587382566147,0.579421629724277,0.38581844092741,0.824171801606613,0.441596760403192,1.71434626192708,0.532427418478012,0.238436189947321,1.0174249164263,0.470546902076653,1.18460451048347,0.914639864363863,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.689531376628944,0,0.77468420592983,0.771626443924566,0.499621155875892,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|short_description=p@chr3:130892189..130892194,+
|short_description=p@chr3:130892189..130892194,+
}}
}}

Latest revision as of 01:13, 6 August 2015

Short description:p@chr3:130892189..130892194, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:130892189..130892194, +
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr3:130892189..130892194+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F88.65
thymus, neonate N03.CNhs11137.2104-43C711.52
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D37.16
thymus, neonate N10.CNhs11194.748-24E411.19
thymus, neonate N20.CNhs11186.820-7A29.06
thymus, neonate N25.CNhs11125.1362-25G78.27
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.13e-119
alpha-beta T cell1.13e-119
immature T cell1.13e-119
mature T cell1.13e-119
immature alpha-beta T cell1.13e-119
CD4-positive, alpha-beta T cell5.17e-108
T cell3.19e-0911
pro-T cell3.19e-0911
lymphoid lineage restricted progenitor cell2.64e-0812
lymphocyte1.56e-0713
common lymphoid progenitor1.56e-0713
hematopoietic lineage restricted progenitor cell5.26e-0725
thymocyte5.42e-076
double negative thymocyte5.42e-076
naive T cell5.42e-076
double-positive, alpha-beta thymocyte5.42e-076
CD4-positive, alpha-beta thymocyte5.42e-076
naive thymus-derived CD4-positive, alpha-beta T cell5.42e-076
DN4 thymocyte5.42e-076
DN1 thymic pro-T cell5.42e-076
DN2 thymocyte5.42e-076
DN3 thymocyte5.42e-076
immature single positive thymocyte5.42e-076
early T lineage precursor5.42e-076
mature CD4 single-positive thymocyte5.42e-076
resting double-positive thymocyte5.42e-076
double-positive blast5.42e-076
CD69-positive double-positive thymocyte5.42e-076
CD69-positive, CD4-positive single-positive thymocyte5.42e-076
CD4-positive, CD8-intermediate double-positive thymocyte5.42e-076
CD24-positive, CD4 single-positive thymocyte5.42e-076

Uber anatomy
Ontology termp-valuen
thymus2.83e-2423
neck2.83e-2423
respiratory system epithelium2.83e-2423
hemolymphoid system gland2.83e-2423
pharyngeal epithelium2.83e-2423
thymic region2.83e-2423
pharyngeal gland2.83e-2423
entire pharyngeal arch endoderm2.83e-2423
thymus primordium2.83e-2423
early pharyngeal endoderm2.83e-2423
pharynx5.15e-2324
gland of gut5.15e-2324
upper respiratory tract5.15e-2324
chordate pharynx5.15e-2324
pharyngeal arch system5.15e-2324
pharyngeal region of foregut5.15e-2324
hemopoietic organ5.67e-2029
immune organ5.67e-2029
segment of respiratory tract8.41e-2027
hematopoietic system4.08e-1645
blood island4.08e-1645
hemolymphoid system6.09e-1648
immune system6.09e-1648
anterior region of body8.19e-1643
mixed endoderm/mesoderm-derived structure1.65e-1535
craniocervical region5.79e-1536
respiratory tract6.44e-1541
respiratory system2.07e-1442
lateral plate mesoderm1.48e-1087
mesoderm1.36e-08120
mesoderm-derived structure1.36e-08120
presumptive mesoderm1.36e-08120
zone of skin6.80e-085
skin epidermis6.80e-085
skin of body6.80e-085
integument6.80e-085
surface6.80e-085
outer epithelium6.80e-085
integumental system6.80e-085
enveloping layer of ectoderm6.80e-085
gut epithelium7.78e-0855
endo-epithelium3.34e-0769
endocrine gland9.56e-0760
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