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FFCP PHASE1:Mm9::chrX:68303301..68303319,+: Difference between revisions

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{{FFCP|EntrezGene=333639|HGNC=|MCL_coexpression_id=2512|UniProt=P0C6A2,D3Z768|association_with_transcript=-111bp_to_ENSMUST00000082088,ENSMUST00000114629,NM_001081354,NM_001256048,uc009tjk.1,uc009tjl.1_5end|description=CAGE_peak_1_at_Mamld1_5end|id=chrX:68303301..68303319,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!8.12e-11!333;UBERON:0004121!8.23e-09!102;UBERON:0000924!8.23e-09!102;UBERON:0006601!8.23e-09!102;UBERON:0002346!1.21e-08!71;UBERON:0003075!1.21e-08!71;UBERON:0007284!1.21e-08!71;UBERON:0000922!3.41e-08!328;UBERON:0000991!5.45e-08!18;UBERON:0005564!5.45e-08!18;UBERON:0000033!7.47e-08!63;UBERON:0004176!1.08e-07!17;UBERON:0009196!1.08e-07!17;UBERON:0009117!1.08e-07!17;UBERON:0000073!1.36e-07!75;UBERON:0001016!1.36e-07!75;UBERON:0003056!2.71e-07!49;UBERON:0001049!3.18e-07!52;UBERON:0005068!3.18e-07!52;UBERON:0006241!3.18e-07!52;UBERON:0007135!3.18e-07!52;UBERON:0003886!4.60e-07!38;UBERON:0003135!4.60e-07!15;UBERON:0002020!4.91e-07!34;UBERON:0002021!5.13e-07!10;UBERON:0000411!5.13e-07!10;UBERON:0001950!5.13e-07!10;UBERON:0000025!5.26e-07!114;UBERON:0001017!5.48e-07!73;UBERON:0005743!5.48e-07!73;UBERON:0003101!6.63e-07!16;UBERON:0000079!6.63e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.01e-11,92;UBERON:0000991,4.07e-08,18;UBERON:0005564,4.07e-08,18;UBERON:0004176,8.13e-08,17;UBERON:0009196,8.13e-08,17;UBERON:0009117,8.13e-08,17;UBERON:0002346,1.28e-07,64;UBERON:0003075,1.28e-07,64;UBERON:0007284,1.28e-07,64;UBERON:0004121,2.31e-07,95;UBERON:0000924,2.31e-07,95;UBERON:0006601,2.31e-07,95;UBERON:0003886,3.58e-07,38;UBERON:0003135,3.58e-07,15;UBERON:0002021,4.00e-07,10;UBERON:0000411,4.00e-07,10;UBERON:0001950,4.00e-07,10;UBERON:0003101,5.20e-07,16;UBERON:0000079,5.20e-07,16;UBERON:0001016,5.27e-07,75;UBERON:0003056,6.56e-07,49;UBERON:0002020,7.12e-07,34;UBERON:0002323,8.77e-07,37;UBERON:0004458,8.77e-07,37;UBERON:0001049,9.51e-07,52;UBERON:0005068,9.51e-07,52;UBERON:0006241,9.51e-07,52;UBERON:0007135,9.51e-07,52|phase1_expression=4.00372117761985,12.563114675017,10.9199817453489,0.60492842261366,0,2.01455126294268,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,4.84746753861098,0,0,1.91990907352088,2.2940928106717,3.44539178469012,1.7230479846363,2.15471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.39921408534059,3.14268486780495,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,0.58328969722285,0.839918529752175,7.18762821824858,0,0,0,14.406528418013,18.9112070359579,7.73508138416164,4.85559506063035,4.23192783417626,6.33831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,2.39680088414724,3.84218305321555,4.35496371695606,4.05017814995072,2.94454945891935,4.85606673486466,4.41737081903227,3.42974237801871,3.45043695665651,0.919218786610021,1.10115880999389,4.72443150915195,3.68655679814984,6.59431438650969,4.94033275453012,6.77187381723788,3.90856198601933,2.8138130501584,5.95913166329559,3.83017161115768,6.40672563595963,5.96478226640962,7.1182621733193,9.3708734532414,11.5945795480671,0,0,0,0,0,1.12355536105401,0,0,0,6.4787973097273,1.28326477414318,0,0,0.649473123033642,1.01343946190039,2.02209778005913,0.91347103775248,6.21450920753212,13.3597925158342,1.38788261412909,1.52232739156071,3.22861696158482,4.52167921657868,7.64326596382081,5.27799683584637,12.6069433544531,9.83275627055399,0.884610551949874,1.94120219936891,2.20841518460394,0.484875253135222,1.86391761218122,30.4492028892009,23.6674778699204,0.255457055208591,0,0,0,8.83764772488454,19.6725259212009,3.26701315493447,15.4703644971126,19.6900902144355,7.06479351502504,11.0324058886075,13.1372779366908,4.22983700074316,10.108910337347,9.25944165900485,2.21204753036596,1.60931473103431,4.50155324513373,5.42537344208574,8.84474488967262,14.8611915530426,11.3379086717272,21.7310831420773,0.215567992932842,1.70195472151037,2.46331573829528,2.41115305670332,2.50242524303038,2.78601733217733,1.02891068203972,6.76716507182877,0,0,0,1.44988040774851,3.51789089971644,3.06105504483725,5.20838418287463,6.29645541591692,5.707883176833,5.8133486187602,7.51165523918934,7.12268588439734,3.94943639792353,7.05920095540109,6.64764238276017,6.14039947186396,4.17145219052996,5.77087600669599,19.3466752678997,3.08713837137853,0.330418782983798,0,0.853153002140936,1.62565670302307,1.15980715189884,2.62188582010345,1.77902435075896,1.71203063501303,1.89811624617805,1.97638745668813,1.50801125280162,2.18852119245266,1.75467678407208,1.79763881730844,0.216138049874694,0.796565093017469,3.22435431620239,2.74196430263349,5.63538678365402,3.25842124552503,3.29719228184964,5.26018649177389,5.31186911843761,3.54264355151045,1.8839847340965,1.60416313098341,0.889357881261447,1.50160595144485,0.196558995113203,0.449724224769707,0.202860121388503,0.964708639009667,0.50925170356284,1.43848068725405,2.91843408195064,0.823684239564244,5.75072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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:333639
|HGNC=
|MCL_coexpression_id=2512
|TSSclassifier=NA
|UniProt=uniprot:P0C6A2,uniprot:D3Z768
|association_with_transcript=-111bp_to_ENSMUST00000082088,ENSMUST00000114629,NM_001081354,NM_001256048,uc009tjk.1,uc009tjl.1_5end
|cluster_id=chrX:68303301..68303319,+
|description=CAGE_peak_1_at_Mamld1_5end
|id=chrX:68303301..68303319,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!8.12e-11!333;UBERON:0004121!8.23e-09!102;UBERON:0000924!8.23e-09!102;UBERON:0006601!8.23e-09!102;UBERON:0002346!1.21e-08!71;UBERON:0003075!1.21e-08!71;UBERON:0007284!1.21e-08!71;UBERON:0000922!3.41e-08!328;UBERON:0000991!5.45e-08!18;UBERON:0005564!5.45e-08!18;UBERON:0000033!7.47e-08!63;UBERON:0004176!1.08e-07!17;UBERON:0009196!1.08e-07!17;UBERON:0009117!1.08e-07!17;UBERON:0000073!1.36e-07!75;UBERON:0001016!1.36e-07!75;UBERON:0003056!2.71e-07!49;UBERON:0001049!3.18e-07!52;UBERON:0005068!3.18e-07!52;UBERON:0006241!3.18e-07!52;UBERON:0007135!3.18e-07!52;UBERON:0003886!4.60e-07!38;UBERON:0003135!4.60e-07!15;UBERON:0002020!4.91e-07!34;UBERON:0002021!5.13e-07!10;UBERON:0000411!5.13e-07!10;UBERON:0001950!5.13e-07!10;UBERON:0000025!5.26e-07!114;UBERON:0001017!5.48e-07!73;UBERON:0005743!5.48e-07!73;UBERON:0003101!6.63e-07!16;UBERON:0000079!6.63e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.01e-11,92;UBERON:0000991,4.07e-08,18;UBERON:0005564,4.07e-08,18;UBERON:0004176,8.13e-08,17;UBERON:0009196,8.13e-08,17;UBERON:0009117,8.13e-08,17;UBERON:0002346,1.28e-07,64;UBERON:0003075,1.28e-07,64;UBERON:0007284,1.28e-07,64;UBERON:0004121,2.31e-07,95;UBERON:0000924,2.31e-07,95;UBERON:0006601,2.31e-07,95;UBERON:0003886,3.58e-07,38;UBERON:0003135,3.58e-07,15;UBERON:0002021,4.00e-07,10;UBERON:0000411,4.00e-07,10;UBERON:0001950,4.00e-07,10;UBERON:0003101,5.20e-07,16;UBERON:0000079,5.20e-07,16;UBERON:0001016,5.27e-07,75;UBERON:0003056,6.56e-07,49;UBERON:0002020,7.12e-07,34;UBERON:0002323,8.77e-07,37;UBERON:0004458,8.77e-07,37;UBERON:0001049,9.51e-07,52;UBERON:0005068,9.51e-07,52;UBERON:0006241,9.51e-07,52;UBERON:0007135,9.51e-07,52
|phase1_expression=4.00372117761985,12.563114675017,10.9199817453489,0.60492842261366,0,2.01455126294268,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,4.84746753861098,0,0,1.91990907352088,2.2940928106717,3.44539178469012,1.7230479846363,2.15471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.39921408534059,3.14268486780495,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,0.58328969722285,0.839918529752175,7.18762821824858,0,0,0,14.406528418013,18.9112070359579,7.73508138416164,4.85559506063035,4.23192783417626,6.33831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,2.39680088414724,3.84218305321555,4.35496371695606,4.05017814995072,2.94454945891935,4.85606673486466,4.41737081903227,3.42974237801871,3.45043695665651,0.919218786610021,1.10115880999389,4.72443150915195,3.68655679814984,6.59431438650969,4.94033275453012,6.77187381723788,3.90856198601933,2.8138130501584,5.95913166329559,3.83017161115768,6.40672563595963,5.96478226640962,7.1182621733193,9.3708734532414,11.5945795480671,0,0,0,0,0,1.12355536105401,0,0,0,6.4787973097273,1.28326477414318,0,0,0.649473123033642,1.01343946190039,2.02209778005913,0.91347103775248,6.21450920753212,13.3597925158342,1.38788261412909,1.52232739156071,3.22861696158482,4.52167921657868,7.64326596382081,5.27799683584637,12.6069433544531,9.83275627055399,0.884610551949874,1.94120219936891,2.20841518460394,0.484875253135222,1.86391761218122,30.4492028892009,23.6674778699204,0.255457055208591,0,0,0,8.83764772488454,19.6725259212009,3.26701315493447,15.4703644971126,19.6900902144355,7.06479351502504,11.0324058886075,13.1372779366908,4.22983700074316,10.108910337347,9.25944165900485,2.21204753036596,1.60931473103431,4.50155324513373,5.42537344208574,8.84474488967262,14.8611915530426,11.3379086717272,21.7310831420773,0.215567992932842,1.70195472151037,2.46331573829528,2.41115305670332,2.50242524303038,2.78601733217733,1.02891068203972,6.76716507182877,0,0,0,1.44988040774851,3.51789089971644,3.06105504483725,5.20838418287463,6.29645541591692,5.707883176833,5.8133486187602,7.51165523918934,7.12268588439734,3.94943639792353,7.05920095540109,6.64764238276017,6.14039947186396,4.17145219052996,5.77087600669599,19.3466752678997,3.08713837137853,0.330418782983798,0,0.853153002140936,1.62565670302307,1.15980715189884,2.62188582010345,1.77902435075896,1.71203063501303,1.89811624617805,1.97638745668813,1.50801125280162,2.18852119245266,1.75467678407208,1.79763881730844,0.216138049874694,0.796565093017469,3.22435431620239,2.74196430263349,5.63538678365402,3.25842124552503,3.29719228184964,5.26018649177389,5.31186911843761,3.54264355151045,1.8839847340965,1.60416313098341,0.889357881261447,1.50160595144485,0.196558995113203,0.449724224769707,0.202860121388503,0.964708639009667,0.50925170356284,1.43848068725405,2.91843408195064,0.823684239564244,5.75072826109418,3.34926852901653,2.18426371180192,1.51547326768267,0.179397413521912,0.482443521363367,2.21703828199926,0.757965647081939,2.28150967018836,2.71592137240301,2.81628297946203,6.03022526790537,7.61739650835244,6.82967767502296,11.8226358079643,11.0732344824387,10.8429242687091,2.13022309130459,1.72684981865896,3.18227928879325,0,0,1.47529281905711,1.37968373152366,5.9403718295483,7.03270119553219,0,3.7870639080656,0.631016438832513,1.56175497718655,1.07711698866399,3.10659437338318,3.7875774594007,5.37845408498782,2.83367491172426,1.75353514746787,3.95287777946523,17.0300297703558,23.7039942297809,4.80777129901589,8.30723492703238,8.24850614862677,1.32745138339963,4.37005145078967,7.86041248108353,3.96070667487386,3.54362271456927,4.30409207121498,5.16856586336442,4.72593848320757,3.92147116223193,1.58018378967908,1.05418608574999,1.03135543248187,3.40439605753788,2.16073312837572,2.45781499187234,3.21505552547388,0.709360934569094,1.07021290561242,0.987294123612726,1.522324745573,0.23467170806371,0.42366414172764,3.74898276693435,2.4732937941222,2.26050197374268,1.93001359770099,0.954978752025092,1.31312719796049,1.45740418314925,7.78786268444141,1.70870880797853,28.0686140429983,22.0381487569957,4.70921142511728,2.32380187125743,1.37266903923914,0.169978429993855,0.279902904647316,0.414599921413271,1.90934123603023,1.42351197111511,5.28630614529807,1.18805874903981,3.3454127362315,1.52853794622324,2.83215127408124,3.55409859618945,1.83229159388821,0.90730481304255,0.621339313086926,4.50954350947352,13.755522236046,9.92750942742586,16.3338998209,15.7574984642832,15.0370951686793,17.2515140809258,17.5775919539333,16.1483390415595,6.03960302065015,6.62469014393091,0,1.21635129174099,1.74608627180206,0.77952493786677,1.43221356533985,0.993406773906324,0.841368146639782,0.295379054349154,1.11063094942962,0.533447646584999,0.806609481094724,0.584747284438515,0.577271049841977,0.467507608726276,0.906921534460845,0,0,0,3.67060228661162,2.62755465631655,2.19781949120718,0.214368379079066,4.01257683228291,18.0720589637461,12.889106622201,13.7494923225455,14.4356673168698,8.22099023724771,12.8416962556249,16.8755625057951,14.8605997063993,19.938265995305,21.2281727818246,1.86817225651518,5.1873233542134,3.24393850932855,7.53630822911712,5.03071590307158,3.8607136774503,6.22290837844523,6.38708677440572,6.73930340142812,3.79045817645696,7.60437899670719,7.54505365544305,5.43120743325318,5.57018825922363,5.22662767496081,7.62069906052918,4.98302601562879,3.8581844092741,6.1812885120496,5.00476328456951,6.17164654293748,3.72699192934609,5.24559617884106,7.1219744149841,5.64656282491984,5.33072029717562,6.0366231048015,5.26139422875686,4.75314398460516,5.05028044491965,4.50813068871862,6.10727790728493,10.6400071224119,5.11291575913688,5.78719832943424,4.49659040288303,4.21076895201735,4.08255002691767,3.82576664137687,4.19123696327079,3.2461496986859
|short_description=p1@Mamld1
}}

Revision as of 09:28, 6 August 2015

Short description:p1@Mamld1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mamld1_5end
Coexpression cluster:MCL_coexpression_mm9:2512
Association with transcript: -111bp_to_ENSMUST00000082088, ENSMUST00000114629, NM_001081354, NM_001256048, uc009tjk.1, uc009tjl.1_5end
EntrezGene:333639
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mamld1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D97.12
Mouse Schwann, donor2.CNhs12573.11746-123F99.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H19.83
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B230.45
cerebellum, neonate N30.CNhs11135.1395-42I223.67
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C68.84
eyeball, neonate N01.CNhs11140.1532-43E714.86
eyeball, neonate N02.CNhs11205.1551-44G811.34
eyeball, neonate N16.CNhs11188.777-19A221.73
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G16.65
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G75.26
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E511.82
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I723.70
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C128.07
spleen, embryo E18.CNhs11011.1271-21F222.04
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F513.76
testis, embryo E15.CNhs11034.443-27C59.93
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I515.76
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B717.25
testis, neonate N07.CNhs11222.726-26I417.58
testis, neonate N10.CNhs11204.763-44D916.15
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B43.25





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.01e-1192
gonad4.07e-0818
gonad primordium4.07e-0818
external genitalia8.13e-0817
indifferent external genitalia8.13e-0817
indifferent gonad8.13e-0817
neurectoderm1.28e-0764
neural plate1.28e-0764
presumptive neural plate1.28e-0764
ectoderm-derived structure2.31e-0795
ectoderm2.31e-0795
presumptive ectoderm2.31e-0795
body cavity precursor3.58e-0738
male reproductive organ3.58e-0715
occipital lobe4.00e-0710
visual cortex4.00e-0710
neocortex4.00e-0710
male organism5.20e-0716
male reproductive system5.20e-0716
nervous system5.27e-0775
pre-chordal neural plate6.56e-0749
gray matter7.12e-0734
body cavity8.77e-0737
body cavity or lining8.77e-0737
neural tube9.51e-0752
neural rod9.51e-0752
future spinal cord9.51e-0752
neural keel9.51e-0752
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