FFCP PHASE1:Mm9::chr8:4217133..4217168,-: Difference between revisions
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{{FFCP|EntrezGene=73072|HGNC=|MCL_coexpression_id=22|UniProt=Q6NVE5,E9PV26|association_with_transcript=143bp_to_ENSMUST00000070717,ENSMUST00000168386,NM_207203,uc012fzb.1_5end|description=CAGE_peak_4_at_BC068157_5end|id=chr8:4217133..4217168,-|ontology_enrichment_celltype=CL:0000540!4.68e-19!33;CL:0000047!4.68e-19!33;CL:0000031!4.68e-19!33;CL:0000404!4.68e-19!33;CL:0000117!1.55e-14!23;CL:0000337!1.55e-14!23;CL:0000221!3.65e-14!44;CL:0000133!3.65e-14!44;CL:0002319!6.41e-14!43;CL:0000393!8.55e-14!39;CL:0000211!8.55e-14!39;CL:0000055!6.49e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.44e-23,33;CL:0000047,7.44e-23,33;CL:0000031,7.44e-23,33;CL:0000404,7.44e-23,33;CL:0000117,3.23e-18,23;CL:0000337,3.23e-18,23;CL:0000393,6.29e-18,39;CL:0000211,6.29e-18,39;CL:0002319,1.98e-15,43;CL:0000221,7.02e-15,44;CL:0000133,7.02e-15,44;CL:0002609,1.56e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.34e-28!73;UBERON:0005743!7.34e-28!73;UBERON:0000073!2.42e-26!75;UBERON:0001016!2.42e-26!75;UBERON:0004121!4.04e-26!102;UBERON:0000924!4.04e-26!102;UBERON:0006601!4.04e-26!102;UBERON:0002346!1.02e-25!71;UBERON:0003075!1.02e-25!71;UBERON:0007284!1.02e-25!71;UBERON:0000033!4.59e-21!63;UBERON:0003056!1.24e-20!49;UBERON:0001049!2.52e-19!52;UBERON:0005068!2.52e-19!52;UBERON:0006241!2.52e-19!52;UBERON:0007135!2.52e-19!52;UBERON:0000955!6.64e-17!50;UBERON:0006238!6.64e-17!50;UBERON:0002616!1.82e-16!49;UBERON:0003080!1.05e-15!40;UBERON:0002020!1.22e-15!34;UBERON:0002780!1.87e-15!39;UBERON:0001890!1.87e-15!39;UBERON:0006240!1.87e-15!39;UBERON:0002791!4.96e-12!29;UBERON:0003528!4.96e-12!29;UBERON:0001893!4.96e-12!29;UBERON:0007811!6.59e-11!86;UBERON:0000956!5.99e-09!21;UBERON:0001869!5.99e-09!21;UBERON:0000203!5.99e-09!21;UBERON:0000153!1.03e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.96e-23,73;UBERON:0002346,1.35e-22,64;UBERON:0003075,1.35e-22,64;UBERON:0007284,1.35e-22,64;UBERON:0004121,1.39e-22,95;UBERON:0000924,1.39e-22,95;UBERON:0006601,1.39e-22,95;UBERON:0001016,4.83e-22,75;UBERON:0003056,1.70e-19,49;UBERON:0010371,3.23e-18,73;UBERON:0002020,7.32e-18,34;UBERON:0000073,1.31e-16,54;UBERON:0001049,1.47e-16,52;UBERON:0005068,1.47e-16,52;UBERON:0006241,1.47e-16,52;UBERON:0007135,1.47e-16,52;UBERON:0002780,5.53e-15,39;UBERON:0001890,5.53e-15,39;UBERON:0006240,5.53e-15,39;UBERON:0003080,2.10e-14,40;UBERON:0010314,1.91e-13,92;UBERON:0000955,5.17e-13,47;UBERON:0006238,5.17e-13,47;UBERON:0003528,1.15e-12,29;UBERON:0002791,1.15e-12,29;UBERON:0001893,1.15e-12,29;UBERON:0002616,1.94e-12,46;UBERON:0000956,1.21e-09,21;UBERON:0001869,1.21e-09,21;UBERON:0000203,1.21e-09,21;UBERON:0001948,2.49e-07,5;UBERON:0002315,2.49e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,11.9366711907163,13.7537654610729,7.60597684207415,0,0,0,0,0,0.299600110518405,0.384218305321555,6.32506635081714,7.83034442323806,5.46844899513593,3.99911378165325,4.19650227808066,5.51208596467293,7.09256485534949,3.67687514644008,1.10115880999389,0.893811366596314,0.46081959976873,14.7712642257817,12.5338071735301,9.89735404057844,0,1.68828783009504,0.763991238884051,7.95497180778903,3.98640706237488,8.57437450796383,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,1.52232739156071,0,1.05505848386836,0.705532242814229,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,7.79056983099759,1.39059456153821,0.767146371990992,1.24672826735736,0.648965052271031,0.203678727700633,0,0,0.420883711772948,2.60240885925407,2.06911893990126,1.80062129805349,3.91832526372859,5.03470093719826,4.22775276940004,3.46696380870997,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,7.30622747892919,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,1.46668478797823,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0.315508219416257,1.17131623288992,1.72338718186239,2.15071918157297,2.45078541490634,4.52922449262132,1.61924280669958,2.04579100537918,1.18586333383957,1.28528526568723,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,3.96134406868882,4.52755393239641,3.42939256050548,1.24138163549592,2.14042581122485,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,1.84130094602871,1.14579102687879,1.3748254587495,2.74033007908257,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,3.21740777510948,6.3843979744165,2.56100408631201,2.18796045361465,2.51535795153579,2.02227859295016,2.00022055021454,0.618105171716683,1.92551525755089,0.252697211763798,1.01391719956096,0.943131706930381,1.03005658216871,0.960377286073039,1.55075766180156,0,1.62238056322798,1.73618298417335,1.64834360321323,1.47198920134397,1.02860775715625,0.887379030796687,0.953744759789284,1.88950341622027,0.658765662907314,0.761531471025089,1.28049581010941,0.789209134313529,1.90125759384206,2.24456908663095,1.42362021749009,1.67457620038458,1.22769312950907,1.08455788830176,0.578719832943424,2.74791635731741,1.87145286756327,1.07435527024149,0.382576664137687,0,0.231867835620421|short_description=p4@BC068157}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73072 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NVE5,uniprot:E9PV26 | |||
|association_with_transcript=143bp_to_ENSMUST00000070717,ENSMUST00000168386,NM_207203,uc012fzb.1_5end | |||
|cluster_id=chr8:4217133..4217168,- | |||
|description=CAGE_peak_4_at_BC068157_5end | |||
|id=chr8:4217133..4217168,- | |||
|ontology_enrichment_celltype=CL:0000540!4.68e-19!33;CL:0000047!4.68e-19!33;CL:0000031!4.68e-19!33;CL:0000404!4.68e-19!33;CL:0000117!1.55e-14!23;CL:0000337!1.55e-14!23;CL:0000221!3.65e-14!44;CL:0000133!3.65e-14!44;CL:0002319!6.41e-14!43;CL:0000393!8.55e-14!39;CL:0000211!8.55e-14!39;CL:0000055!6.49e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.44e-23,33;CL:0000047,7.44e-23,33;CL:0000031,7.44e-23,33;CL:0000404,7.44e-23,33;CL:0000117,3.23e-18,23;CL:0000337,3.23e-18,23;CL:0000393,6.29e-18,39;CL:0000211,6.29e-18,39;CL:0002319,1.98e-15,43;CL:0000221,7.02e-15,44;CL:0000133,7.02e-15,44;CL:0002609,1.56e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.34e-28!73;UBERON:0005743!7.34e-28!73;UBERON:0000073!2.42e-26!75;UBERON:0001016!2.42e-26!75;UBERON:0004121!4.04e-26!102;UBERON:0000924!4.04e-26!102;UBERON:0006601!4.04e-26!102;UBERON:0002346!1.02e-25!71;UBERON:0003075!1.02e-25!71;UBERON:0007284!1.02e-25!71;UBERON:0000033!4.59e-21!63;UBERON:0003056!1.24e-20!49;UBERON:0001049!2.52e-19!52;UBERON:0005068!2.52e-19!52;UBERON:0006241!2.52e-19!52;UBERON:0007135!2.52e-19!52;UBERON:0000955!6.64e-17!50;UBERON:0006238!6.64e-17!50;UBERON:0002616!1.82e-16!49;UBERON:0003080!1.05e-15!40;UBERON:0002020!1.22e-15!34;UBERON:0002780!1.87e-15!39;UBERON:0001890!1.87e-15!39;UBERON:0006240!1.87e-15!39;UBERON:0002791!4.96e-12!29;UBERON:0003528!4.96e-12!29;UBERON:0001893!4.96e-12!29;UBERON:0007811!6.59e-11!86;UBERON:0000956!5.99e-09!21;UBERON:0001869!5.99e-09!21;UBERON:0000203!5.99e-09!21;UBERON:0000153!1.03e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.96e-23,73;UBERON:0002346,1.35e-22,64;UBERON:0003075,1.35e-22,64;UBERON:0007284,1.35e-22,64;UBERON:0004121,1.39e-22,95;UBERON:0000924,1.39e-22,95;UBERON:0006601,1.39e-22,95;UBERON:0001016,4.83e-22,75;UBERON:0003056,1.70e-19,49;UBERON:0010371,3.23e-18,73;UBERON:0002020,7.32e-18,34;UBERON:0000073,1.31e-16,54;UBERON:0001049,1.47e-16,52;UBERON:0005068,1.47e-16,52;UBERON:0006241,1.47e-16,52;UBERON:0007135,1.47e-16,52;UBERON:0002780,5.53e-15,39;UBERON:0001890,5.53e-15,39;UBERON:0006240,5.53e-15,39;UBERON:0003080,2.10e-14,40;UBERON:0010314,1.91e-13,92;UBERON:0000955,5.17e-13,47;UBERON:0006238,5.17e-13,47;UBERON:0003528,1.15e-12,29;UBERON:0002791,1.15e-12,29;UBERON:0001893,1.15e-12,29;UBERON:0002616,1.94e-12,46;UBERON:0000956,1.21e-09,21;UBERON:0001869,1.21e-09,21;UBERON:0000203,1.21e-09,21;UBERON:0001948,2.49e-07,5;UBERON:0002315,2.49e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,11.9366711907163,13.7537654610729,7.60597684207415,0,0,0,0,0,0.299600110518405,0.384218305321555,6.32506635081714,7.83034442323806,5.46844899513593,3.99911378165325,4.19650227808066,5.51208596467293,7.09256485534949,3.67687514644008,1.10115880999389,0.893811366596314,0.46081959976873,14.7712642257817,12.5338071735301,9.89735404057844,0,1.68828783009504,0.763991238884051,7.95497180778903,3.98640706237488,8.57437450796383,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,1.52232739156071,0,1.05505848386836,0.705532242814229,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,7.79056983099759,1.39059456153821,0.767146371990992,1.24672826735736,0.648965052271031,0.203678727700633,0,0,0.420883711772948,2.60240885925407,2.06911893990126,1.80062129805349,3.91832526372859,5.03470093719826,4.22775276940004,3.46696380870997,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,7.30622747892919,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,1.46668478797823,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0.315508219416257,1.17131623288992,1.72338718186239,2.15071918157297,2.45078541490634,4.52922449262132,1.61924280669958,2.04579100537918,1.18586333383957,1.28528526568723,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,3.96134406868882,4.52755393239641,3.42939256050548,1.24138163549592,2.14042581122485,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,1.84130094602871,1.14579102687879,1.3748254587495,2.74033007908257,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,3.21740777510948,6.3843979744165,2.56100408631201,2.18796045361465,2.51535795153579,2.02227859295016,2.00022055021454,0.618105171716683,1.92551525755089,0.252697211763798,1.01391719956096,0.943131706930381,1.03005658216871,0.960377286073039,1.55075766180156,0,1.62238056322798,1.73618298417335,1.64834360321323,1.47198920134397,1.02860775715625,0.887379030796687,0.953744759789284,1.88950341622027,0.658765662907314,0.761531471025089,1.28049581010941,0.789209134313529,1.90125759384206,2.24456908663095,1.42362021749009,1.67457620038458,1.22769312950907,1.08455788830176,0.578719832943424,2.74791635731741,1.87145286756327,1.07435527024149,0.382576664137687,0,0.231867835620421 | |||
|short_description=p4@BC068157 | |||
}} |
Revision as of 10:33, 6 August 2015
Short description: | p4@BC068157 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BC068157_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 143bp_to_ENSMUST00000070717, ENSMUST00000168386, NM_207203, uc012fzb.1_5end |
EntrezGene: | 73072 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.44e-23 | 33 |
neuronal stem cell | 7.44e-23 | 33 |
neuroblast | 7.44e-23 | 33 |
electrically signaling cell | 7.44e-23 | 33 |
CNS neuron (sensu Vertebrata) | 3.23e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-18 | 23 |
electrically responsive cell | 6.29e-18 | 39 |
electrically active cell | 6.29e-18 | 39 |
neural cell | 1.98e-15 | 43 |
ectodermal cell | 7.02e-15 | 44 |
neurectodermal cell | 7.02e-15 | 44 |
neuron of cerebral cortex | 1.56e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.96e-23 | 73 |
neurectoderm | 1.35e-22 | 64 |
neural plate | 1.35e-22 | 64 |
presumptive neural plate | 1.35e-22 | 64 |
ectoderm-derived structure | 1.39e-22 | 95 |
ectoderm | 1.39e-22 | 95 |
presumptive ectoderm | 1.39e-22 | 95 |
nervous system | 4.83e-22 | 75 |
pre-chordal neural plate | 1.70e-19 | 49 |
ecto-epithelium | 3.23e-18 | 73 |
gray matter | 7.32e-18 | 34 |
regional part of nervous system | 1.31e-16 | 54 |
neural tube | 1.47e-16 | 52 |
neural rod | 1.47e-16 | 52 |
future spinal cord | 1.47e-16 | 52 |
neural keel | 1.47e-16 | 52 |
regional part of forebrain | 5.53e-15 | 39 |
forebrain | 5.53e-15 | 39 |
future forebrain | 5.53e-15 | 39 |
anterior neural tube | 2.10e-14 | 40 |
structure with developmental contribution from neural crest | 1.91e-13 | 92 |
brain | 5.17e-13 | 47 |
future brain | 5.17e-13 | 47 |
brain grey matter | 1.15e-12 | 29 |
regional part of telencephalon | 1.15e-12 | 29 |
telencephalon | 1.15e-12 | 29 |
regional part of brain | 1.94e-12 | 46 |
cerebral cortex | 1.21e-09 | 21 |
cerebral hemisphere | 1.21e-09 | 21 |
pallium | 1.21e-09 | 21 |
regional part of spinal cord | 2.49e-07 | 5 |
gray matter of spinal cord | 2.49e-07 | 5 |