FFCP PHASE1:Hg19::chr3:147127489..147127503,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147127489..147127503,+ to FFCP PHASE1:Hg19::chr3:147127489..147127503,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=308bp_to_NM_003412,uc003ewe.2_5end | |||
|cluster_id=chr3:147127489..147127503,+ | |||
|coexpression_cluster_id=C4292 | |||
|description=CAGE_peak_11_at_ZIC1_5end | |||
|id=chr3:147127489..147127503,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.50e-18!15;CL:0000125!1.50e-18!15;CL:0000030!1.50e-18!15;CL:0000339!1.50e-18!15;CL:0000095!3.04e-16!17;CL:0000123!3.04e-16!17;CL:0000128!2.67e-15!7;CL:0000126!2.67e-15!7;CL:0000127!2.67e-15!7;CL:0002453!2.67e-15!7;CL:0000333!3.74e-13!41;CL:0000133!6.10e-13!59;CL:0002319!1.83e-12!25;CL:0000221!8.25e-10!71;CL:0002603!2.41e-08!3;CL:0000064!2.53e-08!3;CL:0005012!2.53e-08!3;CL:0000067!2.53e-08!3;CL:0002304!2.53e-08!3;CL:0000708!8.34e-08!3;CL:0002605!3.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002603;4.05e-22;3!CL:0000064;8.81e-22;3!CL:0000067;8.81e-22;3!CL:0005012;8.81e-22;3!CL:0002304;8.81e-22;3!CL:0000708;7.36e-21;3!CL:0002575;1.53e-15;2!CL:0002549;7.30e-15;2!CL:0002590;2.15e-10;3!CL:0000128;8.75e-10;7!CL:0000126;8.75e-10;7!CL:0000127;8.75e-10;7!CL:0000075;8.12e-09;27!CL:0000669;3.33e-08;4!CL:0000228;4.25e-08;1!CL:0000222;4.25e-08;1!CL:0002372;4.25e-08;1!CL:0000306;6.04e-08;4!CL:0002222;6.04e-08;4!CL:0002224;6.04e-08;4!CL:0000327;1.50e-07;15!CL:0002321;2.15e-07;15!CL:0000243;8.22e-07;15!CL:0000125;8.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,4.06e-22,3;CL:0000064,4.68e-22,3;CL:0000067,4.68e-22,3;CL:0005012,4.68e-22,3;CL:0002304,4.68e-22,3;CL:0000708,1.74e-20,3;CL:0002575,1.54e-15,2;CL:0002549,5.92e-15,2;CL:0000133,8.10e-12,59;CL:0002590,2.15e-10,3;CL:0000128,8.76e-10,7;CL:0000126,8.76e-10,7;CL:0000127,8.76e-10,7;CL:0002453,8.76e-10,7;CL:0000221,2.11e-09,72;CL:0000075,7.84e-09,27;CL:0000669,3.33e-08,4;CL:0000228,3.83e-08,1;CL:0002372,3.83e-08,1;CL:0000306,6.94e-08,4;CL:0002222,6.94e-08,4;CL:0002224,6.94e-08,4;CL:0000327,1.87e-07,15;CL:0000333,5.11e-07,41;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.67e-10;3!CL:0000339;8.22e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.80e-42!94;UBERON:0001016!9.80e-42!94;UBERON:0001017!1.39e-39!82;UBERON:0005743!4.73e-39!86;UBERON:0000955!3.04e-37!69;UBERON:0006238!3.04e-37!69;UBERON:0002616!2.26e-32!59;UBERON:0001049!8.41e-29!57;UBERON:0005068!8.41e-29!57;UBERON:0006241!8.41e-29!57;UBERON:0007135!8.41e-29!57;UBERON:0003075!9.36e-29!86;UBERON:0007284!9.36e-29!86;UBERON:0002346!1.14e-28!90;UBERON:0000033!1.01e-26!123;UBERON:0000924!6.14e-25!173;UBERON:0006601!6.14e-25!173;UBERON:0000153!7.04e-25!129;UBERON:0007811!7.04e-25!129;UBERON:0004121!1.20e-24!169;UBERON:0003076!2.39e-19!15;UBERON:0003057!2.39e-19!15;UBERON:0004733!3.02e-17!12;UBERON:0002028!3.02e-17!12;UBERON:0007277!3.02e-17!12;UBERON:0003056!4.86e-16!61;UBERON:0004732!9.84e-16!13;UBERON:0002680!1.79e-15!9;UBERON:0001895!1.79e-15!9;UBERON:0010092!1.79e-15!9;UBERON:0002037!2.38e-14!6;UBERON:0006215!2.38e-14!6;UBERON:0002780!2.52e-14!41;UBERON:0001890!2.52e-14!41;UBERON:0006240!2.52e-14!41;UBERON:0001893!2.79e-14!34;UBERON:0003080!7.20e-14!42;UBERON:0001869!1.39e-13!32;UBERON:0002791!3.78e-13!33;UBERON:0002020!1.21e-12!34;UBERON:0003528!1.21e-12!34;UBERON:0002200!2.61e-10!11;UBERON:0006876!2.61e-10!11;UBERON:0000475!9.10e-09!365;UBERON:0001778!2.53e-08!3;UBERON:0001775!2.53e-08!3;UBERON:0005284!2.90e-08!5;UBERON:0007023!5.35e-08!115;UBERON:0002420!7.58e-08!9;UBERON:0007245!7.58e-08!9;UBERON:0010009!7.58e-08!9;UBERON:0010011!7.58e-08!9;UBERON:0000454!7.58e-08!9;UBERON:0003210!8.34e-08!3;UBERON:0004905!8.42e-08!5;UBERON:0000982!8.42e-08!5;UBERON:0004770!8.42e-08!5;UBERON:0002308!1.13e-07!9;UBERON:0000125!1.13e-07!9;UBERON:0005174!1.83e-07!5;UBERON:0001137!1.83e-07!5;UBERON:0000956!2.68e-07!25;UBERON:0000203!2.68e-07!25;UBERON:0009663!3.73e-07!7;UBERON:0002418!5.79e-07!3;UBERON:0004755!5.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.05e-30;11!UBERON:0002037;5.33e-29;6!UBERON:0005284;1.28e-22;5!UBERON:0001778;8.81e-22;3!UBERON:0001775;8.81e-22;3!UBERON:0003210;7.36e-21;3!UBERON:0002680;2.65e-19;9!UBERON:0001895;2.65e-19;9!UBERON:0000488;1.74e-16;4!UBERON:0007625;7.52e-16;11!UBERON:0005629;7.30e-15;2!UBERON:0005358;7.30e-15;2!UBERON:0001886;7.30e-15;2!UBERON:0004086;7.30e-15;2!UBERON:0005282;7.30e-15;2!UBERON:0005281;7.30e-15;2!UBERON:0004733;1.92e-14;12!UBERON:0002028;1.92e-14;12!UBERON:0004732;2.56e-13;13!UBERON:0001801;2.04e-12;14!UBERON:0002203;3.60e-11;6!UBERON:0001768;3.60e-11;6!UBERON:0002200;3.60e-11;6!UBERON:0000019;4.29e-09;19!UBERON:0000047;4.29e-09;19!UBERON:0004088;4.29e-09;19!UBERON:0010230;4.29e-09;19!UBERON:0000970;1.25e-08;20!UBERON:0002104;3.31e-08;21!UBERON:0001456;3.31e-08;21!UBERON:0010077;6.04e-08;4!UBERON:0005389;6.04e-08;4!UBERON:0000484;6.04e-08;4!UBERON:0000965;6.04e-08;4!UBERON:0001803;6.04e-08;4!UBERON:0010371;1.17e-07;31!UBERON:0000020;1.80e-07;23!UBERON:0001032;3.77e-07;24!UBERON:0004456;3.77e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.21e-30,11;UBERON:0002037,3.17e-29,6;UBERON:0006215,3.17e-29,6;UBERON:0005284,1.09e-22,5;UBERON:0001778,4.68e-22,3;UBERON:0001775,4.68e-22,3;UBERON:0003210,1.74e-20,3;UBERON:0002680,1.88e-19,9;UBERON:0001895,1.88e-19,9;UBERON:0010092,1.88e-19,9;UBERON:0000488,1.08e-16,4;UBERON:0007625,6.45e-16,11;UBERON:0005629,5.92e-15,2;UBERON:0005358,5.92e-15,2;UBERON:0001886,5.92e-15,2;UBERON:0004086,5.92e-15,2;UBERON:0005282,5.92e-15,2;UBERON:0005281,5.92e-15,2;UBERON:0004733,1.49e-14,12;UBERON:0002028,1.49e-14,12;UBERON:0007277,1.49e-14,12;UBERON:0004732,2.03e-13,13;UBERON:0001801,1.81e-12,14;UBERON:0003076,1.32e-11,15;UBERON:0003057,1.32e-11,15;UBERON:0002203,2.64e-11,6;UBERON:0001768,2.64e-11,6;UBERON:0002200,2.64e-11,6;UBERON:0004121,1.03e-10,171;UBERON:0000924,1.03e-10,171;UBERON:0006601,1.03e-10,171;UBERON:0001016,2.78e-10,89;UBERON:0000955,4.57e-10,68;UBERON:0006238,4.57e-10,68;UBERON:0001017,7.25e-10,81;UBERON:0000019,1.16e-08,20;UBERON:0000047,1.16e-08,20;UBERON:0010312,1.16e-08,20;UBERON:0004088,1.16e-08,20;UBERON:0010230,1.16e-08,20;UBERON:0003072,1.16e-08,20;UBERON:0004128,1.16e-08,20;UBERON:0003071,1.16e-08,20;UBERON:0003075,2.86e-08,82;UBERON:0007284,2.86e-08,82;UBERON:0000970,3.07e-08,21;UBERON:0002104,3.07e-08,21;UBERON:0010077,6.94e-08,4;UBERON:0005389,6.94e-08,4;UBERON:0000484,6.94e-08,4;UBERON:0002546,6.94e-08,4;UBERON:0000965,6.94e-08,4;UBERON:0001803,6.94e-08,4;UBERON:0003073,6.94e-08,4;UBERON:0005426,6.94e-08,4;UBERON:0001456,7.45e-08,22;UBERON:0002346,8.40e-08,86;UBERON:0005085,1.24e-07,31;UBERON:0010371,2.22e-07,104;UBERON:0000020,3.53e-07,24;UBERON:0001032,3.53e-07,24;UBERON:0004456,3.53e-07,24 | |||
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| ||
|short_description=p11@ZIC1 | |||
}} | }} |
Latest revision as of 18:52, 15 September 2015
Short description: | p11@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ZIC1_5end |
Coexpression cluster: | C4292_synovial_Pericytes_Astrocyte_Ciliary_Lens_Smooth_Fibroblast |
Association with transcript: | 308bp_to_NM_003412, uc003ewe.2_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 4.06e-22 | 3 |
ciliated cell | 4.68e-22 | 3 |
ciliated epithelial cell | 4.68e-22 | 3 |
multi-ciliated epithelial cell | 4.68e-22 | 3 |
non-pigmented ciliary epithelial cell | 4.68e-22 | 3 |
leptomeningeal cell | 1.74e-20 | 3 |
central nervous system pericyte | 1.54e-15 | 2 |
fibroblast of choroid plexus | 5.92e-15 | 2 |
neurectodermal cell | 8.10e-12 | 59 |
smooth muscle cell of the brain vasculature | 2.15e-10 | 3 |
oligodendrocyte | 8.76e-10 | 7 |
macroglial cell | 8.76e-10 | 7 |
astrocyte | 8.76e-10 | 7 |
oligodendrocyte precursor cell | 8.76e-10 | 7 |
ectodermal cell | 2.11e-09 | 72 |
columnar/cuboidal epithelial cell | 7.84e-09 | 27 |
pericyte cell | 3.33e-08 | 4 |
multinucleate cell | 3.83e-08 | 1 |
myotube | 3.83e-08 | 1 |
crystallin accumulating cell | 6.94e-08 | 4 |
vertebrate lens cell | 6.94e-08 | 4 |
lens epithelial cell | 6.94e-08 | 4 |
extracellular matrix secreting cell | 1.87e-07 | 15 |
migratory neural crest cell | 5.11e-07 | 41 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |