FFCP PHASE1:Hg19::chr20:33759838..33759845,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:33759838..33759845,+
|short_description=p5@PROCR
|description=CAGE_peak_5_at_PROCR_5end
|association_with_transcript=64bp_to_ENST00000216968,NM_006404,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10544 | |EntrezGene=10544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9452 | |HGNC=9452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNN8 | |UniProt=Q9UNN8 | ||
|association_with_transcript=64bp_to_ENST00000216968,NM_006404,uc002xbt.2_5end | |||
|cluster_id=chr20:33759838..33759845,+ | |||
|coexpression_cluster_id=C4027 | |||
|description=CAGE_peak_5_at_PROCR_5end | |||
|id=chr20:33759838..33759845,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.09e-22!119;CL:0000220!9.95e-21!246;CL:0002321!1.26e-20!248;CL:0000066!3.30e-18!254;CL:0002078!2.02e-16!44;CL:0000115!2.08e-15!35;CL:0002139!4.91e-15!24;CL:0000055!2.71e-14!180;CL:0000071!2.53e-13!18;CL:0002546!2.53e-13!18;CL:0000213!2.64e-13!57;CL:0000215!2.64e-13!57;CL:0000183!6.34e-11!59;CL:0000076!6.44e-11!62;CL:0000680!7.75e-10!57;CL:0000056!7.75e-10!57;CL:0000355!7.75e-10!57;CL:0000187!2.90e-09!54;CL:0000548!7.57e-09!679;CL:0000004!7.57e-09!679;CL:0000255!7.57e-09!679;CL:0000192!8.50e-09!42;CL:0000514!8.50e-09!42;CL:0000012!2.76e-08!682;CL:0000393!7.44e-08!60;CL:0000211!7.44e-08!60;CL:1000413!1.03e-07!9;CL:1000497!1.59e-07!18;CL:0002518!1.59e-07!18;CL:0000359!2.60e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.43e-22;24!CL:0000115;1.10e-21;36!CL:0000071;1.85e-21;18!CL:0002078;2.96e-16;45!CL:0000213;9.98e-13;58!CL:0000215;9.98e-13;58!CL:1000413;4.41e-12;9!CL:1000497;6.94e-10;17!CL:0002518;6.94e-10;17!CL:0002543;1.62e-08;6!CL:0002544;1.70e-08;6!CL:0000076;1.94e-08;63!CL:1000449;4.51e-08;15!CL:1000746;7.46e-08;7!CL:1000612;7.46e-08;7!CL:0002681;9.56e-08;12!CL:0002584;9.56e-08;12!CL:0000359;1.90e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.66e-28,121;CL:0000115,3.64e-26,36;CL:0002078,1.77e-24,45;CL:0002139,5.34e-22,24;CL:0000071,1.09e-21,18;CL:0002546,1.09e-21,18;CL:0000213,6.71e-21,58;CL:0000215,6.71e-21,58;CL:0002321,7.47e-19,250;CL:0000066,1.11e-13,253;CL:0000076,2.37e-13,63;CL:1000413,4.30e-12,9;CL:1000497,4.10e-10,17;CL:0002518,4.10e-10,17;CL:0000680,5.20e-09,58;CL:0000056,5.20e-09,58;CL:0000355,5.20e-09,58;CL:0000187,1.36e-08,55;CL:0002544,1.60e-08,6;CL:0002543,1.62e-08,6;CL:1000449,3.06e-08,15;CL:1000746,3.73e-08,7;CL:1000612,3.73e-08,7;CL:0000192,6.35e-08,43;CL:0000514,6.35e-08,43;CL:0002681,7.90e-08,12;CL:0002584,7.90e-08,12;CL:0000359,9.43e-08,32;CL:0000393,5.60e-07,61;CL:0000211,5.60e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;1.85e-21;18!CL:0000222;3.09e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.19e-21!79;UBERON:0007798!7.19e-21!79;UBERON:0000055!8.88e-21!69;UBERON:0001981!1.05e-18!60;UBERON:0007500!1.05e-18!60;UBERON:0004537!1.05e-18!60;UBERON:0006965!1.05e-18!60;UBERON:0003914!1.95e-16!118;UBERON:0004872!4.57e-16!84;UBERON:0001986!2.53e-13!18;UBERON:0004638!2.53e-13!18;UBERON:0004852!2.53e-13!18;UBERON:0006914!3.40e-13!25;UBERON:0001637!8.18e-13!42;UBERON:0003509!8.18e-13!42;UBERON:0004572!8.18e-13!42;UBERON:0000487!1.55e-12!22;UBERON:0004535!1.59e-12!110;UBERON:0000490!3.25e-12!138;UBERON:0001009!3.36e-12!113;UBERON:0004573!2.09e-11!33;UBERON:0004571!2.09e-11!33;UBERON:0002100!2.11e-11!216;UBERON:0003104!7.62e-11!238;UBERON:0009142!7.62e-11!238;UBERON:0000119!1.07e-10!312;UBERON:0000483!1.31e-10!309;UBERON:0000486!2.92e-10!82;UBERON:0005256!1.97e-09!143;UBERON:0000914!5.83e-09!83;UBERON:0002329!5.83e-09!83;UBERON:0003077!5.83e-09!83;UBERON:0003059!5.83e-09!83;UBERON:0007282!5.83e-09!83;UBERON:0009618!5.83e-09!83;UBERON:0007285!5.83e-09!83;UBERON:0001134!7.51e-09!61;UBERON:0002036!7.51e-09!61;UBERON:0003082!7.51e-09!61;UBERON:0004290!1.06e-08!70;UBERON:0002385!5.84e-08!63;UBERON:0001015!5.84e-08!63;UBERON:0000383!5.84e-08!63;UBERON:0000468!6.49e-08!659;UBERON:0000926!7.99e-08!448;UBERON:0004120!7.99e-08!448;UBERON:0006603!7.99e-08!448;UBERON:0003915!1.03e-07!9;UBERON:0004700!1.03e-07!9;UBERON:0001917!1.03e-07!9;UBERON:0000467!1.09e-07!625;UBERON:0000947!1.21e-07!21;UBERON:0010191!1.21e-07!21;UBERON:0000480!1.60e-07!626;UBERON:0000464!4.87e-07!104;UBERON:0000477!6.24e-07!286;UBERON:0000080!8.21e-07!18;UBERON:0002120!8.21e-07!18;UBERON:0004875!8.21e-07!18;UBERON:0005721!8.21e-07!18;UBERON:0005754!8.21e-07!18;UBERON:0007297!8.21e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.85e-21;18!UBERON:0001986;1.85e-21;18!UBERON:0004852;1.85e-21;18!UBERON:0006914;5.45e-20;25!UBERON:0000487;1.07e-19;22!UBERON:0000490;6.99e-16;33!UBERON:0000055;4.31e-15;65!UBERON:0007500;7.60e-15;56!UBERON:0001981;7.60e-15;56!UBERON:0004537;7.60e-15;56!UBERON:0003914;2.26e-13;74!UBERON:0004573;1.57e-12;33!UBERON:0004571;1.57e-12;33!UBERON:0001637;1.58e-12;42!UBERON:0003509;1.58e-12;42!UBERON:0004572;1.58e-12;42!UBERON:0003915;4.41e-12;9!UBERON:0004700;4.41e-12;9!UBERON:0001917;4.41e-12;9!UBERON:0002049;7.93e-11;75!UBERON:0007798;7.93e-11;75!UBERON:0000025;1.54e-10;93!UBERON:0000947;8.94e-09;21!UBERON:0010191;8.94e-09;21!UBERON:0000353;1.59e-08;15!UBERON:0001638;3.43e-08;9!UBERON:0003920;3.43e-08;9!UBERON:0004582;3.43e-08;9!UBERON:0006555;4.51e-08;15!UBERON:0004819;4.51e-08;15!UBERON:0001285;4.51e-08;15!UBERON:0007684;4.51e-08;15!UBERON:0003513;4.94e-08;7!UBERON:0000074;7.46e-08;7!UBERON:0001229;7.46e-08;7!UBERON:0001225;9.56e-08;12!UBERON:0008987;9.56e-08;12!UBERON:0000483;1.16e-07;136!UBERON:0002113;3.97e-07;24!UBERON:0011143;3.97e-07;24 | |||
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| ||
|short_description=p5@PROCR | |||
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Latest revision as of 19:24, 15 September 2015
Short description: | p5@PROCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PROCR_5end |
Coexpression cluster: | C4027_Wilms_Endothelial_mesothelioma_Renal_mesenchymal_leiomyoma_Fibroblast |
Association with transcript: | 64bp_to_ENST00000216968, NM_006404, uc002xbt.2_5end |
EntrezGene: | PROCR |
HGNC: | 9452 |
UniProt: | Q9UNN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.66e-28 | 121 |
endothelial cell | 3.64e-26 | 36 |
meso-epithelial cell | 1.77e-24 | 45 |
endothelial cell of vascular tree | 5.34e-22 | 24 |
blood vessel endothelial cell | 1.09e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-21 | 18 |
lining cell | 6.71e-21 | 58 |
barrier cell | 6.71e-21 | 58 |
embryonic cell | 7.47e-19 | 250 |
epithelial cell | 1.11e-13 | 253 |
squamous epithelial cell | 2.37e-13 | 63 |
endothelial cell of artery | 4.30e-12 | 9 |
kidney cell | 4.10e-10 | 17 |
kidney epithelial cell | 4.10e-10 | 17 |
muscle precursor cell | 5.20e-09 | 58 |
myoblast | 5.20e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.20e-09 | 58 |
muscle cell | 1.36e-08 | 55 |
aortic endothelial cell | 1.60e-08 | 6 |
vein endothelial cell | 1.62e-08 | 6 |
epithelial cell of nephron | 3.06e-08 | 15 |
glomerular cell | 3.73e-08 | 7 |
kidney corpuscule cell | 3.73e-08 | 7 |
smooth muscle cell | 6.35e-08 | 43 |
smooth muscle myoblast | 6.35e-08 | 43 |
kidney cortical cell | 7.90e-08 | 12 |
renal cortical epithelial cell | 7.90e-08 | 12 |
vascular associated smooth muscle cell | 9.43e-08 | 32 |
electrically responsive cell | 5.60e-07 | 61 |
electrically active cell | 5.60e-07 | 61 |