FFCP PHASE1:Hg19::chr3:149260294..149260308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000485244_5end | |association_with_transcript=-68bp_to_ENST00000485244_5end | ||
|cluster_id=chr3:149260294..149260308,- | |||
|coexpression_cluster_id=C1922 | |coexpression_cluster_id=C1922 | ||
|description=CAGE_peak_12_at_WWTR1_5end | |description=CAGE_peak_12_at_WWTR1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!8.11e-14!24;CL:0000222!2.44e-13!119;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:1000507!3.22e-10!12;CL:1000494!3.22e-10!12;CL:0000213!3.62e-10!57;CL:0000215!3.62e-10!57;CL:1000497!5.80e-10!18;CL:0002518!5.80e-10!18;CL:0002078!2.93e-09!44;CL:0000115!2.97e-08!35;CL:1000449!3.05e-08!16;CL:0000220!2.86e-07!246;CL:0002321!4.94e-07!248;CL:0002543!7.75e-07!6 | |ontology_enrichment_celltype=CL:0002139!8.11e-14!24;CL:0000222!2.44e-13!119;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:1000507!3.22e-10!12;CL:1000494!3.22e-10!12;CL:0000213!3.62e-10!57;CL:0000215!3.62e-10!57;CL:1000497!5.80e-10!18;CL:0002518!5.80e-10!18;CL:0002078!2.93e-09!44;CL:0000115!2.97e-08!35;CL:1000449!3.05e-08!16;CL:0000220!2.86e-07!246;CL:0002321!4.94e-07!248;CL:0002543!7.75e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.09e-29;10!CL:1000494;2.09e-29;10!CL:1000497;1.46e-26;17!CL:0002518;1.46e-26;17!CL:1000449;2.22e-24;15!CL:0000071;3.14e-15;18!CL:0002144;1.95e-14;3!CL:0002139;5.19e-14;24!CL:0002681;6.55e-14;12!CL:0002584;6.55e-14;12!CL:0002543;1.05e-12;6!CL:0000650;2.69e-10;2!CL:1000500;2.69e-10;2!CL:1000618;2.69e-10;2!CL:1001318;2.69e-10;2!CL:0002173;2.69e-10;2!CL:0000115;2.35e-08;36!CL:0002078;5.70e-08;45!CL:0000239;1.09e-07;3!CL:1000615;1.09e-07;3!CL:0002306;1.09e-07;3!CL:0002618;2.04e-07;3 | |ontology_enrichment_celltype_v019=CL:1000507;2.09e-29;10!CL:1000494;2.09e-29;10!CL:1000497;1.46e-26;17!CL:0002518;1.46e-26;17!CL:1000449;2.22e-24;15!CL:0000071;3.14e-15;18!CL:0002144;1.95e-14;3!CL:0002139;5.19e-14;24!CL:0002681;6.55e-14;12!CL:0002584;6.55e-14;12!CL:0002543;1.05e-12;6!CL:0000650;2.69e-10;2!CL:1000500;2.69e-10;2!CL:1000618;2.69e-10;2!CL:1001318;2.69e-10;2!CL:0002173;2.69e-10;2!CL:0000115;2.35e-08;36!CL:0002078;5.70e-08;45!CL:0000239;1.09e-07;3!CL:1000615;1.09e-07;3!CL:0002306;1.09e-07;3!CL:0002618;2.04e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.65e-29,10;CL:1000494,1.65e-29,10;CL:1000497,1.26e-26,17;CL:0002518,1.26e-26,17;CL:1000449,1.92e-24,15;CL:0000071,2.27e-15,18;CL:0002546,2.27e-15,18;CL:0002144,1.17e-14,3;CL:0002139,3.87e-14,24;CL:0002681,6.80e-14,12;CL:0002584,6.80e-14,12;CL:0002543,1.16e-12,6;CL:0002078,1.22e-12,45;CL:0000115,4.07e-11,36;CL:0000650,3.66e-10,2;CL:1000500,3.66e-10,2;CL:1000618,3.66e-10,2;CL:1001318,3.66e-10,2;CL:0002173,3.66e-10,2;CL:0000066,1.79e-08,253;CL:0000239,1.11e-07,3;CL:1000615,1.11e-07,3;CL:0002306,1.11e-07,3;CL:0000213,1.14e-07,58;CL:0000215,1.14e-07,58;CL:0002618,2.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.14e-15;18 | |ontology_enrichment_development_v019=CL:0002546;3.14e-15;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.01e-10;2 | |ontology_enrichment_disease_v019=DOID:4468;1.01e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.17e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.35e-14!118;UBERON:0001986!6.54e-11!18;UBERON:0004638!6.54e-11!18;UBERON:0004852!6.54e-11!18;UBERON:0002049!1.47e-10!79;UBERON:0007798!1.47e-10!79;UBERON:0000055!1.65e-10!69;UBERON:0009773!3.22e-10!12;UBERON:0001231!3.22e-10!12;UBERON:0004810!3.22e-10!12;UBERON:0004872!1.92e-09!84;UBERON:0001981!3.37e-09!60;UBERON:0007500!3.37e-09!60;UBERON:0004537!3.37e-09!60;UBERON:0006965!3.37e-09!60;UBERON:0002100!3.99e-09!216;UBERON:0000483!5.77e-09!309;UBERON:0000119!6.07e-09!312;UBERON:0006555!8.17e-09!17;UBERON:0005103!8.17e-09!17;UBERON:0000083!8.17e-09!17;UBERON:0009201!8.17e-09!17;UBERON:0004819!8.17e-09!17;UBERON:0006553!8.17e-09!17;UBERON:0003074!8.17e-09!17;UBERON:0003060!8.17e-09!17;UBERON:0004535!2.91e-08!110;UBERON:0004211!3.05e-08!16;UBERON:0001285!3.05e-08!16;UBERON:0007684!3.05e-08!16;UBERON:0003220!3.05e-08!16;UBERON:0004208!3.05e-08!16;UBERON:0001009!4.09e-08!113;UBERON:0002113!4.16e-08!27;UBERON:0003918!4.16e-08!27;UBERON:0005095!4.16e-08!27;UBERON:0007687!4.16e-08!27;UBERON:0000080!4.63e-08!18;UBERON:0002120!4.63e-08!18;UBERON:0004875!4.63e-08!18;UBERON:0005721!4.63e-08!18;UBERON:0005754!4.63e-08!18;UBERON:0007297!4.63e-08!18;UBERON:0000487!6.43e-08!22;UBERON:0001008!7.40e-08!45;UBERON:0000025!8.51e-08!194;UBERON:0003103!1.00e-07!69;UBERON:0004111!1.07e-07!241;UBERON:0003886!1.19e-07!63;UBERON:0003104!1.31e-07!238;UBERON:0009142!1.31e-07!238;UBERON:0000468!1.40e-07!659;UBERON:0006554!2.46e-07!44;UBERON:0000490!3.33e-07!138;UBERON:0006914!3.36e-07!25;UBERON:0003887!5.21e-07!21;UBERON:0005256!6.90e-07!143;UBERON:0000489!7.83e-07!32;UBERON:0000058!8.13e-07!26;UBERON:0004876!8.48e-07!20;UBERON:0000926!8.85e-07!448;UBERON:0004120!8.85e-07!448;UBERON:0006603!8.85e-07!448;UBERON:0000477!9.07e-07!286;UBERON:0003064!9.51e-07!37 | |ontology_enrichment_uberon=UBERON:0003914!1.35e-14!118;UBERON:0001986!6.54e-11!18;UBERON:0004638!6.54e-11!18;UBERON:0004852!6.54e-11!18;UBERON:0002049!1.47e-10!79;UBERON:0007798!1.47e-10!79;UBERON:0000055!1.65e-10!69;UBERON:0009773!3.22e-10!12;UBERON:0001231!3.22e-10!12;UBERON:0004810!3.22e-10!12;UBERON:0004872!1.92e-09!84;UBERON:0001981!3.37e-09!60;UBERON:0007500!3.37e-09!60;UBERON:0004537!3.37e-09!60;UBERON:0006965!3.37e-09!60;UBERON:0002100!3.99e-09!216;UBERON:0000483!5.77e-09!309;UBERON:0000119!6.07e-09!312;UBERON:0006555!8.17e-09!17;UBERON:0005103!8.17e-09!17;UBERON:0000083!8.17e-09!17;UBERON:0009201!8.17e-09!17;UBERON:0004819!8.17e-09!17;UBERON:0006553!8.17e-09!17;UBERON:0003074!8.17e-09!17;UBERON:0003060!8.17e-09!17;UBERON:0004535!2.91e-08!110;UBERON:0004211!3.05e-08!16;UBERON:0001285!3.05e-08!16;UBERON:0007684!3.05e-08!16;UBERON:0003220!3.05e-08!16;UBERON:0004208!3.05e-08!16;UBERON:0001009!4.09e-08!113;UBERON:0002113!4.16e-08!27;UBERON:0003918!4.16e-08!27;UBERON:0005095!4.16e-08!27;UBERON:0007687!4.16e-08!27;UBERON:0000080!4.63e-08!18;UBERON:0002120!4.63e-08!18;UBERON:0004875!4.63e-08!18;UBERON:0005721!4.63e-08!18;UBERON:0005754!4.63e-08!18;UBERON:0007297!4.63e-08!18;UBERON:0000487!6.43e-08!22;UBERON:0001008!7.40e-08!45;UBERON:0000025!8.51e-08!194;UBERON:0003103!1.00e-07!69;UBERON:0004111!1.07e-07!241;UBERON:0003886!1.19e-07!63;UBERON:0003104!1.31e-07!238;UBERON:0009142!1.31e-07!238;UBERON:0000468!1.40e-07!659;UBERON:0006554!2.46e-07!44;UBERON:0000490!3.33e-07!138;UBERON:0006914!3.36e-07!25;UBERON:0003887!5.21e-07!21;UBERON:0005256!6.90e-07!143;UBERON:0000489!7.83e-07!32;UBERON:0000058!8.13e-07!26;UBERON:0004876!8.48e-07!20;UBERON:0000926!8.85e-07!448;UBERON:0004120!8.85e-07!448;UBERON:0006603!8.85e-07!448;UBERON:0000477!9.07e-07!286;UBERON:0003064!9.51e-07!37 | ||
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| ||
|short_description=p12@WWTR1 | |short_description=p12@WWTR1 | ||
}} | }} |
Latest revision as of 21:50, 15 September 2015
Short description: | p12@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -68bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.65e-29 | 10 |
nephron tubule epithelial cell | 1.65e-29 | 10 |
kidney cell | 1.26e-26 | 17 |
kidney epithelial cell | 1.26e-26 | 17 |
epithelial cell of nephron | 1.92e-24 | 15 |
blood vessel endothelial cell | 2.27e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-15 | 18 |
capillary endothelial cell | 1.17e-14 | 3 |
endothelial cell of vascular tree | 3.87e-14 | 24 |
kidney cortical cell | 6.80e-14 | 12 |
renal cortical epithelial cell | 6.80e-14 | 12 |
vein endothelial cell | 1.16e-12 | 6 |
meso-epithelial cell | 1.22e-12 | 45 |
endothelial cell | 4.07e-11 | 36 |
mesangial cell | 3.66e-10 | 2 |
kidney interstitial cell | 3.66e-10 | 2 |
juxtaglomerular complex cell | 3.66e-10 | 2 |
renal interstitial pericyte | 3.66e-10 | 2 |
extraglomerular mesangial cell | 3.66e-10 | 2 |
epithelial cell | 1.79e-08 | 253 |
brush border epithelial cell | 1.11e-07 | 3 |
kidney cortex tubule cell | 1.11e-07 | 3 |
epithelial cell of proximal tubule | 1.11e-07 | 3 |
lining cell | 1.14e-07 | 58 |
barrier cell | 1.14e-07 | 58 |
endothelial cell of umbilical vein | 2.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.17e-10 | 2 |