FFCP PHASE1:Hg19::chr3:152016989..152017017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4154 | |EntrezGene=4154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6923 | |HGNC=6923 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBW7,Q86UV8,C9JP00,Q96RE3,Q9NR56,Q86UV9 | |UniProt=E9PBW7,Q86UV8,C9JP00,Q96RE3,Q9NR56,Q86UV9 | ||
|association_with_transcript=-176bp_to_ENST00000324196,ENST00000357472,ENST00000498502,ENST00000545754,NM_207293,NM_207294,NM_207295,NM_207296,NM_207297,uc003ezl.2,uc003ezm.2,uc003ezn.2,uc003ezo.2,uc003ezp.2_5end | |association_with_transcript=-176bp_to_ENST00000324196,ENST00000357472,ENST00000498502,ENST00000545754,NM_207293,NM_207294,NM_207295,NM_207296,NM_207297,uc003ezl.2,uc003ezm.2,uc003ezn.2,uc003ezo.2,uc003ezp.2_5end | ||
|cluster_id=chr3:152016989..152017017,+ | |||
|description=CAGE_peak_5_at_MBNL1_5end | |description=CAGE_peak_5_at_MBNL1_5end | ||
|id=chr3:152016989..152017017,+ | |id=chr3:152016989..152017017,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.93e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.71e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.52e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-18!115;UBERON:0001049!2.47e-13!57;UBERON:0005068!2.47e-13!57;UBERON:0006241!2.47e-13!57;UBERON:0007135!2.47e-13!57;UBERON:0000073!1.63e-12!94;UBERON:0001016!1.63e-12!94;UBERON:0003080!1.73e-12!42;UBERON:0000955!4.26e-12!69;UBERON:0006238!4.26e-12!69;UBERON:0002780!5.40e-12!41;UBERON:0001890!5.40e-12!41;UBERON:0006240!5.40e-12!41;UBERON:0002616!6.80e-12!59;UBERON:0001869!9.71e-11!32;UBERON:0002020!9.89e-11!34;UBERON:0003528!9.89e-11!34;UBERON:0001893!3.28e-10!34;UBERON:0001017!3.46e-10!82;UBERON:0002346!5.68e-10!90;UBERON:0005743!6.46e-10!86;UBERON:0002791!6.55e-10!33;UBERON:0002619!2.32e-09!22;UBERON:0000924!3.88e-09!173;UBERON:0006601!3.88e-09!173;UBERON:0003075!2.23e-08!86;UBERON:0007284!2.23e-08!86;UBERON:0001950!2.36e-08!20;UBERON:0000033!2.81e-08!123;UBERON:0000153!4.73e-08!129;UBERON:0007811!4.73e-08!129;UBERON:0004121!6.94e-08!169;UBERON:0000956!1.83e-07!25;UBERON:0000203!1.83e-07!25;UBERON:0003056!5.64e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.31e-11;32!UBERON:0002619;1.20e-10;22!UBERON:0003528;1.43e-10;34!UBERON:0002020;1.43e-10;34!UBERON:0002791;2.97e-10;32!UBERON:0002780;6.05e-10;41!UBERON:0001890;6.05e-10;41!UBERON:0001893;6.53e-10;34!UBERON:0001950;1.67e-09;20!UBERON:0000956;2.56e-08;25!UBERON:0000203;2.56e-08;25!UBERON:0000073;8.71e-08;53!UBERON:0002616;8.71e-08;53!UBERON:0001016;7.57e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.90e-19,114;UBERON:0001049,3.86e-13,56;UBERON:0005068,3.86e-13,56;UBERON:0006241,3.86e-13,56;UBERON:0007135,3.86e-13,56;UBERON:0002780,5.71e-13,41;UBERON:0001890,5.71e-13,41;UBERON:0003080,5.71e-13,41;UBERON:0006240,5.71e-13,41;UBERON:0000073,6.07e-13,53;UBERON:0002616,6.07e-13,53;UBERON:0001016,1.62e-12,89;UBERON:0001869,3.87e-12,32;UBERON:0011216,7.35e-12,223;UBERON:0003528,7.74e-12,34;UBERON:0002020,7.74e-12,34;UBERON:0001893,3.05e-11,34;UBERON:0002791,4.80e-11,32;UBERON:0000955,5.52e-11,68;UBERON:0006238,5.52e-11,68;UBERON:0002619,1.16e-10,22;UBERON:0001017,1.29e-09,81;UBERON:0001950,1.73e-09,20;UBERON:0004121,3.48e-09,171;UBERON:0000924,3.48e-09,171;UBERON:0006601,3.48e-09,171;UBERON:0002346,1.14e-08,86;UBERON:0000956,2.47e-08,25;UBERON:0000203,2.47e-08,25;UBERON:0003075,5.05e-07,82;UBERON:0007284,5.05e-07,82;UBERON:0003056,8.79e-07,61 | |||
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| ||
|short_description=p5@MBNL1 | |short_description=p5@MBNL1 | ||
}} | }} |
Latest revision as of 02:25, 16 September 2015
Short description: | p5@MBNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MBNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_ENST00000324196, ENST00000357472, ENST00000498502, ENST00000545754, NM_207293, NM_207294, NM_207295, NM_207296, NM_207297, uc003ezl.2, uc003ezm.2, uc003ezn.2, uc003ezo.2, uc003ezp.2_5end |
EntrezGene: | MBNL1 |
HGNC: | 6923 |
UniProt: | E9PBW7Q86UV8C9JP00Q96RE3Q9NR56Q86UV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.90e-19 | 114 |
neural tube | 3.86e-13 | 56 |
neural rod | 3.86e-13 | 56 |
future spinal cord | 3.86e-13 | 56 |
neural keel | 3.86e-13 | 56 |
regional part of forebrain | 5.71e-13 | 41 |
forebrain | 5.71e-13 | 41 |
anterior neural tube | 5.71e-13 | 41 |
future forebrain | 5.71e-13 | 41 |
regional part of nervous system | 6.07e-13 | 53 |
regional part of brain | 6.07e-13 | 53 |
nervous system | 1.62e-12 | 89 |
cerebral hemisphere | 3.87e-12 | 32 |
organ system subdivision | 7.35e-12 | 223 |
brain grey matter | 7.74e-12 | 34 |
gray matter | 7.74e-12 | 34 |
telencephalon | 3.05e-11 | 34 |
regional part of telencephalon | 4.80e-11 | 32 |
brain | 5.52e-11 | 68 |
future brain | 5.52e-11 | 68 |
regional part of cerebral cortex | 1.16e-10 | 22 |
central nervous system | 1.29e-09 | 81 |
neocortex | 1.73e-09 | 20 |
ectoderm-derived structure | 3.48e-09 | 171 |
ectoderm | 3.48e-09 | 171 |
presumptive ectoderm | 3.48e-09 | 171 |
neurectoderm | 1.14e-08 | 86 |
cerebral cortex | 2.47e-08 | 25 |
pallium | 2.47e-08 | 25 |
neural plate | 5.05e-07 | 82 |
presumptive neural plate | 5.05e-07 | 82 |
pre-chordal neural plate | 8.79e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.52e-07 | 10 |