FFCP PHASE1:Hg19::chr19:14640427..14640448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9524 | |EntrezGene=9524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4551 | |HGNC=4551 | ||
|TSSclassifier=strong | |||
|UniProt=B3KSQ1 | |UniProt=B3KSQ1 | ||
|association_with_transcript=20bp_to_ENST00000436007_5end | |association_with_transcript=20bp_to_ENST00000436007_5end | ||
|cluster_id=chr19:14640427..14640448,+ | |||
|description=CAGE_peak_2_at_TECR_5end | |description=CAGE_peak_2_at_TECR_5end | ||
|id=chr19:14640427..14640448,+ | |id=chr19:14640427..14640448,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.14e-08!254;CL:0000325!7.67e-08!39 | |ontology_enrichment_celltype=CL:0000066!2.14e-08!254;CL:0000325!7.67e-08!39 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.46e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!3.07e-13!219;UBERON:0001049!3.73e-13!57;UBERON:0005068!3.73e-13!57;UBERON:0006241!3.73e-13!57;UBERON:0007135!3.73e-13!57;UBERON:0007023!8.10e-13!115;UBERON:0000153!1.51e-12!129;UBERON:0007811!1.51e-12!129;UBERON:0000033!3.51e-12!123;UBERON:0000924!9.14e-12!173;UBERON:0006601!9.14e-12!173;UBERON:0004121!1.29e-11!169;UBERON:0002616!2.68e-11!59;UBERON:0000955!3.14e-11!69;UBERON:0006238!3.14e-11!69;UBERON:0002346!1.70e-10!90;UBERON:0003075!1.92e-10!86;UBERON:0007284!1.92e-10!86;UBERON:0005743!5.93e-10!86;UBERON:0001017!1.18e-09!82;UBERON:0003056!1.22e-08!61;UBERON:0000062!1.76e-08!511;UBERON:0000073!3.93e-08!94;UBERON:0001016!3.93e-08!94;UBERON:0002780!4.19e-08!41;UBERON:0001890!4.19e-08!41;UBERON:0006240!4.19e-08!41;UBERON:0003080!5.14e-08!42;UBERON:0005631!3.36e-07!14;UBERON:0000158!3.36e-07!14;UBERON:0003076!5.21e-07!15;UBERON:0003057!5.21e-07!15;UBERON:0001893!5.68e-07!34;UBERON:0000063!6.60e-07!97;UBERON:0002020!7.15e-07!34;UBERON:0003528!7.15e-07!34;UBERON:0000475!8.21e-07!365;UBERON:0001737!9.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.80e-07;53!UBERON:0002616;2.80e-07;53!UBERON:0001737;9.78e-07;9!UBERON:0001557;9.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.01e-14,104;UBERON:0001049,2.81e-13,56;UBERON:0005068,2.81e-13,56;UBERON:0006241,2.81e-13,56;UBERON:0007135,2.81e-13,56;UBERON:0004121,1.45e-12,171;UBERON:0000924,1.45e-12,171;UBERON:0006601,1.45e-12,171;UBERON:0007023,1.63e-12,114;UBERON:0000073,3.17e-12,53;UBERON:0002616,3.17e-12,53;UBERON:0002346,1.55e-11,86;UBERON:0003075,1.63e-11,82;UBERON:0007284,1.63e-11,82;UBERON:0000955,2.67e-11,68;UBERON:0006238,2.67e-11,68;UBERON:0001017,1.07e-09,81;UBERON:0011216,2.66e-09,223;UBERON:0003056,4.15e-09,61;UBERON:0002780,4.19e-08,41;UBERON:0001890,4.19e-08,41;UBERON:0003080,4.19e-08,41;UBERON:0006240,4.19e-08,41;UBERON:0001016,7.53e-08,89;UBERON:0005631,3.36e-07,14;UBERON:0000158,3.36e-07,14;UBERON:0003076,5.21e-07,15;UBERON:0003057,5.21e-07,15;UBERON:0001893,5.68e-07,34;UBERON:0003528,7.15e-07,34;UBERON:0002020,7.15e-07,34;UBERON:0001737,9.78e-07,9 | |||
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| ||
|short_description=p2@TECR | |short_description=p2@TECR | ||
}} | }} |
Latest revision as of 05:22, 16 September 2015
Short description: | p2@TECR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TECR_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000436007_5end |
EntrezGene: | TECR |
HGNC: | 4551 |
UniProt: | B3KSQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.46e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.01e-14 | 104 |
neural tube | 2.81e-13 | 56 |
neural rod | 2.81e-13 | 56 |
future spinal cord | 2.81e-13 | 56 |
neural keel | 2.81e-13 | 56 |
ectoderm-derived structure | 1.45e-12 | 171 |
ectoderm | 1.45e-12 | 171 |
presumptive ectoderm | 1.45e-12 | 171 |
adult organism | 1.63e-12 | 114 |
regional part of nervous system | 3.17e-12 | 53 |
regional part of brain | 3.17e-12 | 53 |
neurectoderm | 1.55e-11 | 86 |
neural plate | 1.63e-11 | 82 |
presumptive neural plate | 1.63e-11 | 82 |
brain | 2.67e-11 | 68 |
future brain | 2.67e-11 | 68 |
central nervous system | 1.07e-09 | 81 |
organ system subdivision | 2.66e-09 | 223 |
pre-chordal neural plate | 4.15e-09 | 61 |
regional part of forebrain | 4.19e-08 | 41 |
forebrain | 4.19e-08 | 41 |
anterior neural tube | 4.19e-08 | 41 |
future forebrain | 4.19e-08 | 41 |
nervous system | 7.53e-08 | 89 |
extraembryonic membrane | 3.36e-07 | 14 |
membranous layer | 3.36e-07 | 14 |
posterior neural tube | 5.21e-07 | 15 |
chordal neural plate | 5.21e-07 | 15 |
telencephalon | 5.68e-07 | 34 |
brain grey matter | 7.15e-07 | 34 |
gray matter | 7.15e-07 | 34 |
larynx | 9.78e-07 | 9 |