FFCP PHASE1:Hg19::chr20:4129496..4129511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54498 | |EntrezGene=54498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15862 | |HGNC=15862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000484515_5end | |association_with_transcript=18bp_to_ENST00000484515_5end | ||
|cluster_id=chr20:4129496..4129511,+ | |||
|description=CAGE_peak_2_at_SMOX_5end | |description=CAGE_peak_2_at_SMOX_5end | ||
|id=chr20:4129496..4129511,+ | |id=chr20:4129496..4129511,+ | ||
|ontology_enrichment_celltype=CL:0000183!5.44e-12!59;CL:0000680!4.75e-10!57;CL:0000056!4.75e-10!57;CL:0000355!4.75e-10!57;CL:0000187!5.52e-10!54;CL:0000393!1.07e-08!60;CL:0000211!1.07e-08!60;CL:0000359!1.61e-08!32;CL:0000192!2.60e-08!42;CL:0000514!2.60e-08!42;CL:0000055!3.11e-07!180;CL:0000222!4.56e-07!119;CL:1000497!7.59e-07!18;CL:0002518!7.59e-07!18 | |ontology_enrichment_celltype=CL:0000183!5.44e-12!59;CL:0000680!4.75e-10!57;CL:0000056!4.75e-10!57;CL:0000355!4.75e-10!57;CL:0000187!5.52e-10!54;CL:0000393!1.07e-08!60;CL:0000211!1.07e-08!60;CL:0000359!1.61e-08!32;CL:0000192!2.60e-08!42;CL:0000514!2.60e-08!42;CL:0000055!3.11e-07!180;CL:0000222!4.56e-07!119;CL:1000497!7.59e-07!18;CL:0002518!7.59e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.04e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,6.17e-10,55;CL:0000680,7.82e-10,58;CL:0000056,7.82e-10,58;CL:0000355,7.82e-10,58;CL:0000393,1.18e-08,61;CL:0000211,1.18e-08,61;CL:0000192,3.59e-08,43;CL:0000514,3.59e-08,43;CL:0000359,3.93e-08,32;CL:0000222,8.19e-07,121;CL:1000497,8.33e-07,17;CL:0002518,8.33e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.34e-21!194;UBERON:0000922!4.04e-21!612;UBERON:0002050!5.00e-20!605;UBERON:0005423!5.00e-20!605;UBERON:0000477!8.78e-20!286;UBERON:0000923!1.39e-19!604;UBERON:0005291!1.39e-19!604;UBERON:0006598!1.39e-19!604;UBERON:0002532!1.39e-19!604;UBERON:0004111!1.97e-19!241;UBERON:0000468!1.04e-18!659;UBERON:0000467!9.34e-18!625;UBERON:0000480!1.84e-17!626;UBERON:0003914!2.24e-16!118;UBERON:0000119!1.30e-15!312;UBERON:0000483!1.46e-15!309;UBERON:0000481!2.46e-14!347;UBERON:0005256!3.07e-11!143;UBERON:0000475!1.91e-10!365;UBERON:0000926!4.90e-10!448;UBERON:0004120!4.90e-10!448;UBERON:0006603!4.90e-10!448;UBERON:0001637!8.30e-10!42;UBERON:0003509!8.30e-10!42;UBERON:0004572!8.30e-10!42;UBERON:0000490!2.72e-09!138;UBERON:0004872!5.31e-09!84;UBERON:0000062!1.25e-08!511;UBERON:0001049!1.80e-08!57;UBERON:0005068!1.80e-08!57;UBERON:0006241!1.80e-08!57;UBERON:0007135!1.80e-08!57;UBERON:0003103!2.61e-08!69;UBERON:0001134!4.14e-08!61;UBERON:0002036!4.14e-08!61;UBERON:0003082!4.14e-08!61;UBERON:0004573!6.07e-08!33;UBERON:0004571!6.07e-08!33;UBERON:0002385!6.27e-08!63;UBERON:0001015!6.27e-08!63;UBERON:0000383!6.27e-08!63;UBERON:0002100!7.35e-08!216;UBERON:0001981!8.79e-08!60;UBERON:0007500!8.79e-08!60;UBERON:0004537!8.79e-08!60;UBERON:0006965!8.79e-08!60;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0002616!1.21e-07!59;UBERON:0002346!1.24e-07!90;UBERON:0003104!1.52e-07!238;UBERON:0009142!1.52e-07!238;UBERON:0000489!1.65e-07!32;UBERON:0005743!1.68e-07!86;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0001017!3.04e-07!82;UBERON:0000058!4.69e-07!26;UBERON:0004290!7.11e-07!70;UBERON:0001008!8.35e-07!45;UBERON:0006554!9.13e-07!44;UBERON:0000055!9.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.68e-07;33!UBERON:0004571;1.68e-07;33!UBERON:0001637;3.50e-07;42!UBERON:0003509;3.50e-07;42!UBERON:0004572;3.50e-07;42!UBERON:0000489;3.71e-07;29 | |||
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| ||
|short_description=p2@SMOX | |short_description=p2@SMOX | ||
}} | }} |
Latest revision as of 06:25, 16 September 2015
Short description: | p2@SMOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMOX_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000484515_5end |
EntrezGene: | SMOX |
HGNC: | 15862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 6.17e-10 | 55 |
muscle precursor cell | 7.82e-10 | 58 |
myoblast | 7.82e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.82e-10 | 58 |
electrically responsive cell | 1.18e-08 | 61 |
electrically active cell | 1.18e-08 | 61 |
smooth muscle cell | 3.59e-08 | 43 |
smooth muscle myoblast | 3.59e-08 | 43 |
vascular associated smooth muscle cell | 3.93e-08 | 32 |
mesodermal cell | 8.19e-07 | 121 |
kidney cell | 8.33e-07 | 17 |
kidney epithelial cell | 8.33e-07 | 17 |