FFCP PHASE1:Hg19::chr1:150336614..150336659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23248 | |EntrezGene=23248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29039 | |HGNC=29039 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT52 | |UniProt=Q5VT52 | ||
|association_with_transcript=-330bp_to_NM_015203,uc001eup.3,uc009wlr.2,uc010pcc.1_5end | |association_with_transcript=-330bp_to_NM_015203,uc001eup.3,uc009wlr.2,uc010pcc.1_5end | ||
|cluster_id=chr1:150336614..150336659,+ | |||
|description=CAGE_peak_2_at_RPRD2_5end | |description=CAGE_peak_2_at_RPRD2_5end | ||
|id=chr1:150336614..150336659,+ | |id=chr1:150336614..150336659,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.35e-07;82 | |||
|ontology_enrichment_disease=DOID:162!2.91e-10!235;DOID:14566!1.06e-09!239;DOID:0050687!2.93e-09!143;DOID:305!9.82e-07!106 | |ontology_enrichment_disease=DOID:162!2.91e-10!235;DOID:14566!1.06e-09!239;DOID:0050687!2.93e-09!143;DOID:305!9.82e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.25e-10,235;DOID:14566,1.22e-09,239;DOID:0050687,2.86e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.27e-19!82;UBERON:0000073!3.04e-18!94;UBERON:0001016!3.04e-18!94;UBERON:0005743!3.94e-18!86;UBERON:0000955!1.46e-17!69;UBERON:0006238!1.46e-17!69;UBERON:0007023!7.79e-17!115;UBERON:0001049!1.28e-16!57;UBERON:0005068!1.28e-16!57;UBERON:0006241!1.28e-16!57;UBERON:0007135!1.28e-16!57;UBERON:0002780!1.61e-13!41;UBERON:0001890!1.61e-13!41;UBERON:0006240!1.61e-13!41;UBERON:0002616!2.08e-13!59;UBERON:0003080!2.25e-13!42;UBERON:0003075!6.14e-12!86;UBERON:0007284!6.14e-12!86;UBERON:0002346!1.03e-11!90;UBERON:0002020!1.99e-11!34;UBERON:0003528!1.99e-11!34;UBERON:0001893!3.16e-11!34;UBERON:0002791!3.61e-11!33;UBERON:0001869!3.30e-10!32;UBERON:0003056!2.14e-09!61;UBERON:0004121!2.92e-09!169;UBERON:0000924!3.01e-09!173;UBERON:0006601!3.01e-09!173;UBERON:0000153!6.77e-09!129;UBERON:0007811!6.77e-09!129;UBERON:0002619!1.06e-08!22;UBERON:0000033!1.29e-08!123;UBERON:0000956!3.85e-08!25;UBERON:0000203!3.85e-08!25;UBERON:0001950!7.39e-08!20 | |ontology_enrichment_uberon=UBERON:0001017!4.27e-19!82;UBERON:0000073!3.04e-18!94;UBERON:0001016!3.04e-18!94;UBERON:0005743!3.94e-18!86;UBERON:0000955!1.46e-17!69;UBERON:0006238!1.46e-17!69;UBERON:0007023!7.79e-17!115;UBERON:0001049!1.28e-16!57;UBERON:0005068!1.28e-16!57;UBERON:0006241!1.28e-16!57;UBERON:0007135!1.28e-16!57;UBERON:0002780!1.61e-13!41;UBERON:0001890!1.61e-13!41;UBERON:0006240!1.61e-13!41;UBERON:0002616!2.08e-13!59;UBERON:0003080!2.25e-13!42;UBERON:0003075!6.14e-12!86;UBERON:0007284!6.14e-12!86;UBERON:0002346!1.03e-11!90;UBERON:0002020!1.99e-11!34;UBERON:0003528!1.99e-11!34;UBERON:0001893!3.16e-11!34;UBERON:0002791!3.61e-11!33;UBERON:0001869!3.30e-10!32;UBERON:0003056!2.14e-09!61;UBERON:0004121!2.92e-09!169;UBERON:0000924!3.01e-09!173;UBERON:0006601!3.01e-09!173;UBERON:0000153!6.77e-09!129;UBERON:0007811!6.77e-09!129;UBERON:0002619!1.06e-08!22;UBERON:0000033!1.29e-08!123;UBERON:0000956!3.85e-08!25;UBERON:0000203!3.85e-08!25;UBERON:0001950!7.39e-08!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.14e-10;53!UBERON:0002616;5.14e-10;53!UBERON:0002780;5.70e-10;41!UBERON:0001890;5.70e-10;41!UBERON:0003528;9.55e-10;34!UBERON:0002020;9.55e-10;34!UBERON:0001893;9.83e-10;34!UBERON:0002791;2.08e-09;32!UBERON:0001869;4.52e-09;32!UBERON:0002619;1.02e-08;22!UBERON:0000955;1.48e-08;68!UBERON:0001017;4.58e-08;75!UBERON:0000956;5.00e-08;25!UBERON:0000203;5.00e-08;25!UBERON:0001950;6.53e-08;20!UBERON:0001016;6.97e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.33e-19,89;UBERON:0001017,3.43e-19,81;UBERON:0000955,1.13e-17,68;UBERON:0006238,1.13e-17,68;UBERON:0001049,9.36e-17,56;UBERON:0005068,9.36e-17,56;UBERON:0006241,9.36e-17,56;UBERON:0007135,9.36e-17,56;UBERON:0007023,1.86e-16,114;UBERON:0000073,1.05e-15,53;UBERON:0002616,1.05e-15,53;UBERON:0002780,1.58e-13,41;UBERON:0001890,1.58e-13,41;UBERON:0003080,1.58e-13,41;UBERON:0006240,1.58e-13,41;UBERON:0003528,1.97e-11,34;UBERON:0002020,1.97e-11,34;UBERON:0001893,3.12e-11,34;UBERON:0003075,4.87e-11,82;UBERON:0007284,4.87e-11,82;UBERON:0002346,7.93e-11,86;UBERON:0002791,1.14e-10,32;UBERON:0001869,3.26e-10,32;UBERON:0011216,3.95e-10,223;UBERON:0003056,1.55e-09,61;UBERON:0002619,1.05e-08,22;UBERON:0000956,3.82e-08,25;UBERON:0000203,3.82e-08,25;UBERON:0001950,7.33e-08,20;UBERON:0004121,7.80e-08,171;UBERON:0000924,7.80e-08,171;UBERON:0006601,7.80e-08,171 | |||
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| ||
|short_description=p2@RPRD2 | |short_description=p2@RPRD2 | ||
}} | }} |
Latest revision as of 22:04, 16 September 2015
Short description: | p2@RPRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -330bp_to_NM_015203, uc001eup.3, uc009wlr.2, uc010pcc.1_5end |
EntrezGene: | RPRD2 |
HGNC: | 29039 |
UniProt: | Q5VT52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.33e-19 | 89 |
central nervous system | 3.43e-19 | 81 |
brain | 1.13e-17 | 68 |
future brain | 1.13e-17 | 68 |
neural tube | 9.36e-17 | 56 |
neural rod | 9.36e-17 | 56 |
future spinal cord | 9.36e-17 | 56 |
neural keel | 9.36e-17 | 56 |
adult organism | 1.86e-16 | 114 |
regional part of nervous system | 1.05e-15 | 53 |
regional part of brain | 1.05e-15 | 53 |
regional part of forebrain | 1.58e-13 | 41 |
forebrain | 1.58e-13 | 41 |
anterior neural tube | 1.58e-13 | 41 |
future forebrain | 1.58e-13 | 41 |
brain grey matter | 1.97e-11 | 34 |
gray matter | 1.97e-11 | 34 |
telencephalon | 3.12e-11 | 34 |
neural plate | 4.87e-11 | 82 |
presumptive neural plate | 4.87e-11 | 82 |
neurectoderm | 7.93e-11 | 86 |
regional part of telencephalon | 1.14e-10 | 32 |
cerebral hemisphere | 3.26e-10 | 32 |
organ system subdivision | 3.95e-10 | 223 |
pre-chordal neural plate | 1.55e-09 | 61 |
regional part of cerebral cortex | 1.05e-08 | 22 |
cerebral cortex | 3.82e-08 | 25 |
pallium | 3.82e-08 | 25 |
neocortex | 7.33e-08 | 20 |
ectoderm-derived structure | 7.80e-08 | 171 |
ectoderm | 7.80e-08 | 171 |
presumptive ectoderm | 7.80e-08 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.25e-10 | 235 |
disease of cellular proliferation | 1.22e-09 | 239 |
cell type cancer | 2.86e-09 | 143 |