FFCP PHASE1:Hg19::chr10:135186836..135186871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1892 | |EntrezGene=1892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3151 | |HGNC=3151 | ||
|TSSclassifier=strong | |||
|UniProt=P30084 | |UniProt=P30084 | ||
|association_with_transcript=36bp_to_NM_004092,uc001lmu.2_5end | |association_with_transcript=36bp_to_NM_004092,uc001lmu.2_5end | ||
|cluster_id=chr10:135186836..135186871,- | |||
|description=CAGE_peak_1_at_ECHS1_5end | |description=CAGE_peak_1_at_ECHS1_5end | ||
|id=chr10:135186836..135186871,- | |id=chr10:135186836..135186871,- | ||
|ontology_enrichment_celltype=CL:0000220!5.95e-21!246;CL:0002321!7.24e-21!248;CL:0000222!4.32e-20!119;CL:0000183!2.75e-14!59;CL:0000066!4.40e-14!254;CL:0000680!1.72e-12!57;CL:0000056!1.72e-12!57;CL:0000355!1.72e-12!57;CL:0000187!6.36e-12!54;CL:0000055!8.17e-12!180;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0000359!2.49e-10!32;CL:0000393!5.13e-10!60;CL:0000211!5.13e-10!60;CL:0000548!2.72e-09!679;CL:0000004!2.72e-09!679;CL:0000255!2.72e-09!679;CL:0000012!5.95e-09!682;CL:0002078!8.81e-09!44;CL:0000115!9.15e-09!35;CL:0002371!1.96e-08!591;CL:0000213!6.04e-08!57;CL:0000215!6.04e-08!57;CL:0000144!1.28e-07!625;CL:0002139!2.58e-07!24;CL:1000449!3.58e-07!16;CL:0000325!3.62e-07!39 | |ontology_enrichment_celltype=CL:0000220!5.95e-21!246;CL:0002321!7.24e-21!248;CL:0000222!4.32e-20!119;CL:0000183!2.75e-14!59;CL:0000066!4.40e-14!254;CL:0000680!1.72e-12!57;CL:0000056!1.72e-12!57;CL:0000355!1.72e-12!57;CL:0000187!6.36e-12!54;CL:0000055!8.17e-12!180;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0000359!2.49e-10!32;CL:0000393!5.13e-10!60;CL:0000211!5.13e-10!60;CL:0000548!2.72e-09!679;CL:0000004!2.72e-09!679;CL:0000255!2.72e-09!679;CL:0000012!5.95e-09!682;CL:0002078!8.81e-09!44;CL:0000115!9.15e-09!35;CL:0002371!1.96e-08!591;CL:0000213!6.04e-08!57;CL:0000215!6.04e-08!57;CL:0000144!1.28e-07!625;CL:0002139!2.58e-07!24;CL:1000449!3.58e-07!16;CL:0000325!3.62e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.14e-09;32!CL:0000192;4.30e-08;43!CL:1000449;5.39e-08;15!CL:0000115;9.05e-08;36!CL:0000136;2.20e-07;13!CL:0002139;2.65e-07;24!CL:1000497;3.24e-07;17!CL:0002518;3.24e-07;17!CL:0000187;8.17e-07;55!CL:0002078;8.36e-07;45 | |ontology_enrichment_celltype_v019=CL:0000359;1.14e-09;32!CL:0000192;4.30e-08;43!CL:1000449;5.39e-08;15!CL:0000115;9.05e-08;36!CL:0000136;2.20e-07;13!CL:0002139;2.65e-07;24!CL:1000497;3.24e-07;17!CL:0002518;3.24e-07;17!CL:0000187;8.17e-07;55!CL:0002078;8.36e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.04e-21,250;CL:0000222,4.69e-20,121;CL:0000066,2.66e-14,253;CL:0000680,5.33e-12,58;CL:0000056,5.33e-12,58;CL:0000355,5.33e-12,58;CL:0000187,1.97e-11,55;CL:0000192,4.32e-11,43;CL:0000514,4.32e-11,43;CL:0000359,2.49e-10,32;CL:0000393,1.29e-09,61;CL:0000211,1.29e-09,61;CL:0000115,3.77e-09,36;CL:0002078,3.78e-09,45;CL:0000213,2.81e-08,58;CL:0000215,2.81e-08,58;CL:1000449,5.26e-08,15;CL:0002139,2.58e-07,24;CL:1000497,3.09e-07,17;CL:0002518,3.09e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;4.30e-08;43!CL:0000355;3.78e-07;58 | |ontology_enrichment_development_v019=CL:0000514;4.30e-08;43!CL:0000355;3.78e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.12e-22!118;UBERON:0005256!5.65e-22!143;UBERON:0003104!2.67e-19!238;UBERON:0009142!2.67e-19!238;UBERON:0002100!3.64e-19!216;UBERON:0000490!1.13e-18!138;UBERON:0000481!2.11e-17!347;UBERON:0002049!6.10e-17!79;UBERON:0007798!6.10e-17!79;UBERON:0000119!1.58e-15!312;UBERON:0000483!4.80e-15!309;UBERON:0000055!1.53e-14!69;UBERON:0004290!2.04e-14!70;UBERON:0000486!2.12e-14!82;UBERON:0000475!3.44e-14!365;UBERON:0004872!3.91e-14!84;UBERON:0000914!4.98e-14!83;UBERON:0002329!4.98e-14!83;UBERON:0003077!4.98e-14!83;UBERON:0003059!4.98e-14!83;UBERON:0007282!4.98e-14!83;UBERON:0009618!4.98e-14!83;UBERON:0007285!4.98e-14!83;UBERON:0002385!5.86e-13!63;UBERON:0001015!5.86e-13!63;UBERON:0000383!5.86e-13!63;UBERON:0001134!6.13e-13!61;UBERON:0002036!6.13e-13!61;UBERON:0003082!6.13e-13!61;UBERON:0001981!1.04e-12!60;UBERON:0007500!1.04e-12!60;UBERON:0004537!1.04e-12!60;UBERON:0006965!1.04e-12!60;UBERON:0000477!2.91e-12!286;UBERON:0001637!8.00e-12!42;UBERON:0003509!8.00e-12!42;UBERON:0004572!8.00e-12!42;UBERON:0009569!2.65e-11!113;UBERON:0004111!3.46e-11!241;UBERON:0001009!4.98e-11!113;UBERON:0000468!2.23e-10!659;UBERON:0004535!5.38e-10!110;UBERON:0003103!7.02e-10!69;UBERON:0000926!1.28e-09!448;UBERON:0004120!1.28e-09!448;UBERON:0006603!1.28e-09!448;UBERON:0002417!5.75e-09!61;UBERON:0000916!5.75e-09!61;UBERON:0000467!1.63e-08!625;UBERON:0004573!1.92e-08!33;UBERON:0004571!1.92e-08!33;UBERON:0000480!2.37e-08!626;UBERON:0005172!2.40e-08!55;UBERON:0005173!2.40e-08!55;UBERON:0000025!3.65e-08!194;UBERON:0006554!1.22e-07!44;UBERON:0000080!1.49e-07!18;UBERON:0002120!1.49e-07!18;UBERON:0004875!1.49e-07!18;UBERON:0005721!1.49e-07!18;UBERON:0005754!1.49e-07!18;UBERON:0007297!1.49e-07!18;UBERON:0004876!1.78e-07!20;UBERON:0004211!3.58e-07!16;UBERON:0001285!3.58e-07!16;UBERON:0007684!3.58e-07!16;UBERON:0003220!3.58e-07!16;UBERON:0004208!3.58e-07!16;UBERON:0001008!4.08e-07!45;UBERON:0002113!5.20e-07!27;UBERON:0003918!5.20e-07!27;UBERON:0005095!5.20e-07!27;UBERON:0007687!5.20e-07!27;UBERON:0006555!5.39e-07!17;UBERON:0005103!5.39e-07!17;UBERON:0000083!5.39e-07!17;UBERON:0009201!5.39e-07!17;UBERON:0004819!5.39e-07!17;UBERON:0006553!5.39e-07!17;UBERON:0003074!5.39e-07!17;UBERON:0003060!5.39e-07!17 | |ontology_enrichment_uberon=UBERON:0003914!3.12e-22!118;UBERON:0005256!5.65e-22!143;UBERON:0003104!2.67e-19!238;UBERON:0009142!2.67e-19!238;UBERON:0002100!3.64e-19!216;UBERON:0000490!1.13e-18!138;UBERON:0000481!2.11e-17!347;UBERON:0002049!6.10e-17!79;UBERON:0007798!6.10e-17!79;UBERON:0000119!1.58e-15!312;UBERON:0000483!4.80e-15!309;UBERON:0000055!1.53e-14!69;UBERON:0004290!2.04e-14!70;UBERON:0000486!2.12e-14!82;UBERON:0000475!3.44e-14!365;UBERON:0004872!3.91e-14!84;UBERON:0000914!4.98e-14!83;UBERON:0002329!4.98e-14!83;UBERON:0003077!4.98e-14!83;UBERON:0003059!4.98e-14!83;UBERON:0007282!4.98e-14!83;UBERON:0009618!4.98e-14!83;UBERON:0007285!4.98e-14!83;UBERON:0002385!5.86e-13!63;UBERON:0001015!5.86e-13!63;UBERON:0000383!5.86e-13!63;UBERON:0001134!6.13e-13!61;UBERON:0002036!6.13e-13!61;UBERON:0003082!6.13e-13!61;UBERON:0001981!1.04e-12!60;UBERON:0007500!1.04e-12!60;UBERON:0004537!1.04e-12!60;UBERON:0006965!1.04e-12!60;UBERON:0000477!2.91e-12!286;UBERON:0001637!8.00e-12!42;UBERON:0003509!8.00e-12!42;UBERON:0004572!8.00e-12!42;UBERON:0009569!2.65e-11!113;UBERON:0004111!3.46e-11!241;UBERON:0001009!4.98e-11!113;UBERON:0000468!2.23e-10!659;UBERON:0004535!5.38e-10!110;UBERON:0003103!7.02e-10!69;UBERON:0000926!1.28e-09!448;UBERON:0004120!1.28e-09!448;UBERON:0006603!1.28e-09!448;UBERON:0002417!5.75e-09!61;UBERON:0000916!5.75e-09!61;UBERON:0000467!1.63e-08!625;UBERON:0004573!1.92e-08!33;UBERON:0004571!1.92e-08!33;UBERON:0000480!2.37e-08!626;UBERON:0005172!2.40e-08!55;UBERON:0005173!2.40e-08!55;UBERON:0000025!3.65e-08!194;UBERON:0006554!1.22e-07!44;UBERON:0000080!1.49e-07!18;UBERON:0002120!1.49e-07!18;UBERON:0004875!1.49e-07!18;UBERON:0005721!1.49e-07!18;UBERON:0005754!1.49e-07!18;UBERON:0007297!1.49e-07!18;UBERON:0004876!1.78e-07!20;UBERON:0004211!3.58e-07!16;UBERON:0001285!3.58e-07!16;UBERON:0007684!3.58e-07!16;UBERON:0003220!3.58e-07!16;UBERON:0004208!3.58e-07!16;UBERON:0001008!4.08e-07!45;UBERON:0002113!5.20e-07!27;UBERON:0003918!5.20e-07!27;UBERON:0005095!5.20e-07!27;UBERON:0007687!5.20e-07!27;UBERON:0006555!5.39e-07!17;UBERON:0005103!5.39e-07!17;UBERON:0000083!5.39e-07!17;UBERON:0009201!5.39e-07!17;UBERON:0004819!5.39e-07!17;UBERON:0006553!5.39e-07!17;UBERON:0003074!5.39e-07!17;UBERON:0003060!5.39e-07!17 | ||
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4307291 | ||
|short_description=p1@ECHS1 | |short_description=p1@ECHS1 | ||
}} | }} |
Latest revision as of 05:44, 17 September 2015
Short description: | p1@ECHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ECHS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_NM_004092, uc001lmu.2_5end |
EntrezGene: | ECHS1 |
HGNC: | 3151 |
UniProt: | P30084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.04e-21 | 250 |
mesodermal cell | 4.69e-20 | 121 |
epithelial cell | 2.66e-14 | 253 |
muscle precursor cell | 5.33e-12 | 58 |
myoblast | 5.33e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.33e-12 | 58 |
muscle cell | 1.97e-11 | 55 |
smooth muscle cell | 4.32e-11 | 43 |
smooth muscle myoblast | 4.32e-11 | 43 |
vascular associated smooth muscle cell | 2.49e-10 | 32 |
electrically responsive cell | 1.29e-09 | 61 |
electrically active cell | 1.29e-09 | 61 |
endothelial cell | 3.77e-09 | 36 |
meso-epithelial cell | 3.78e-09 | 45 |
lining cell | 2.81e-08 | 58 |
barrier cell | 2.81e-08 | 58 |
epithelial cell of nephron | 5.26e-08 | 15 |
endothelial cell of vascular tree | 2.58e-07 | 24 |
kidney cell | 3.09e-07 | 17 |
kidney epithelial cell | 3.09e-07 | 17 |