FFCP PHASE1:Hg19::chr12:133066726..133066797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57666 | |EntrezGene=57666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29308 | |HGNC=29308 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCM7 | |UniProt=Q9HCM7 | ||
|association_with_transcript=-359bp_to_ENST00000261673,NM_001142641,uc001ukf.2_5end | |association_with_transcript=-359bp_to_ENST00000261673,NM_001142641,uc001ukf.2_5end | ||
|cluster_id=chr12:133066726..133066797,+ | |||
|description=CAGE_peak_1_at_FBRSL1_5end | |description=CAGE_peak_1_at_FBRSL1_5end | ||
|id=chr12:133066726..133066797,+ | |id=chr12:133066726..133066797,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.05e-19!140;CL:0000037!1.50e-16!172;CL:0000566!1.50e-16!172;CL:0000988!1.60e-16!182;CL:0000766!2.36e-16!76;CL:0000860!1.28e-15!45;CL:0002057!1.28e-15!42;CL:0002032!1.98e-15!165;CL:0000837!1.98e-15!165;CL:0000557!4.36e-15!71;CL:0000763!2.09e-14!112;CL:0000049!2.09e-14!112;CL:0002009!1.23e-13!65;CL:0002087!1.24e-13!119;CL:0002031!1.34e-13!124;CL:0002194!1.37e-12!63;CL:0000576!1.37e-12!63;CL:0000040!1.37e-12!63;CL:0000559!1.37e-12!63;CL:0000839!5.66e-12!70 | |ontology_enrichment_celltype=CL:0000738!1.05e-19!140;CL:0000037!1.50e-16!172;CL:0000566!1.50e-16!172;CL:0000988!1.60e-16!182;CL:0000766!2.36e-16!76;CL:0000860!1.28e-15!45;CL:0002057!1.28e-15!42;CL:0002032!1.98e-15!165;CL:0000837!1.98e-15!165;CL:0000557!4.36e-15!71;CL:0000763!2.09e-14!112;CL:0000049!2.09e-14!112;CL:0002009!1.23e-13!65;CL:0002087!1.24e-13!119;CL:0002031!1.34e-13!124;CL:0002194!1.37e-12!63;CL:0000576!1.37e-12!63;CL:0000040!1.37e-12!63;CL:0000559!1.37e-12!63;CL:0000839!5.66e-12!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.91e-12;33!CL:0002057;5.91e-12;33!CL:0000576;4.60e-10;48!CL:0000473;3.54e-08;39!CL:0000234;3.54e-08;39!CL:0000766;9.53e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.15e-20,136;CL:0000988,7.48e-17,177;CL:0000766,7.61e-17,72;CL:0000037,1.18e-16,168;CL:0000860,1.28e-15,42;CL:0002057,1.28e-15,42;CL:0000557,1.43e-15,67;CL:0002032,1.56e-15,161;CL:0000837,1.56e-15,161;CL:0000763,1.26e-14,108;CL:0000049,1.26e-14,108;CL:0002009,4.10e-14,61;CL:0002087,8.25e-14,115;CL:0002031,9.24e-14,120;CL:0002194,4.91e-13,59;CL:0000576,4.91e-13,59;CL:0000040,4.91e-13,59;CL:0000559,4.91e-13,59;CL:0000473,1.12e-12,48;CL:0000234,1.12e-12,48;CL:0000839,2.49e-12,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.33e-30!115;UBERON:0002390!1.88e-15!102;UBERON:0003061!1.88e-15!102;UBERON:0001049!7.48e-14!57;UBERON:0005068!7.48e-14!57;UBERON:0006241!7.48e-14!57;UBERON:0007135!7.48e-14!57;UBERON:0002193!2.59e-13!112;UBERON:0003080!2.11e-11!42;UBERON:0002780!2.36e-11!41;UBERON:0001890!2.36e-11!41;UBERON:0006240!2.36e-11!41;UBERON:0002616!2.82e-11!59;UBERON:0002371!1.56e-10!80;UBERON:0002405!2.26e-10!115;UBERON:0001893!7.85e-10!34;UBERON:0001474!9.75e-10!86;UBERON:0002791!1.98e-09!33;UBERON:0002020!2.29e-09!34;UBERON:0003528!2.29e-09!34;UBERON:0002619!3.28e-09!22;UBERON:0000955!4.01e-09!69;UBERON:0006238!4.01e-09!69;UBERON:0001869!4.60e-09!32;UBERON:0003075!1.33e-08!86;UBERON:0007284!1.33e-08!86;UBERON:0001950!1.37e-08!20;UBERON:0002346!5.21e-08!90;UBERON:0001017!6.06e-08!82;UBERON:0005743!1.36e-07!86;UBERON:0000956!2.79e-07!25;UBERON:0000203!2.79e-07!25;UBERON:0003056!3.70e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.51e-09;22!UBERON:0001893;1.42e-08;34!UBERON:0001950;1.45e-08;20!UBERON:0002780;1.85e-08;41!UBERON:0001890;1.85e-08;41!UBERON:0000073;1.87e-08;53!UBERON:0002616;1.87e-08;53!UBERON:0002791;3.96e-08;32!UBERON:0001869;4.32e-08;32!UBERON:0007023;4.73e-08;114!UBERON:0003528;5.04e-08;34!UBERON:0002020;5.04e-08;34!UBERON:0000956;3.06e-07;25!UBERON:0000203;3.06e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.18e-29,114;UBERON:0002390,9.73e-16,98;UBERON:0003061,9.73e-16,98;UBERON:0000073,7.77e-14,53;UBERON:0002616,7.77e-14,53;UBERON:0001049,8.58e-14,56;UBERON:0005068,8.58e-14,56;UBERON:0006241,8.58e-14,56;UBERON:0007135,8.58e-14,56;UBERON:0002193,1.67e-13,108;UBERON:0002780,2.36e-11,41;UBERON:0001890,2.36e-11,41;UBERON:0003080,2.36e-11,41;UBERON:0006240,2.36e-11,41;UBERON:0002371,9.05e-11,76;UBERON:0001474,6.38e-10,82;UBERON:0002405,6.81e-10,93;UBERON:0001893,7.85e-10,34;UBERON:0003075,1.78e-09,82;UBERON:0007284,1.78e-09,82;UBERON:0003528,2.29e-09,34;UBERON:0002020,2.29e-09,34;UBERON:0002619,3.28e-09,22;UBERON:0002791,4.50e-09,32;UBERON:0001869,4.60e-09,32;UBERON:0000955,4.89e-09,68;UBERON:0006238,4.89e-09,68;UBERON:0002346,8.24e-09,86;UBERON:0001950,1.37e-08,20;UBERON:0001017,7.43e-08,81;UBERON:0000956,2.79e-07,25;UBERON:0000203,2.79e-07,25;UBERON:0003056,3.07e-07,61;UBERON:0010371,6.49e-07,104 | |||
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| ||
|short_description=p1@FBRSL1 | |short_description=p1@FBRSL1 | ||
}} | }} |
Latest revision as of 10:54, 17 September 2015
Short description: | p1@FBRSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBRSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -359bp_to_ENST00000261673, NM_001142641, uc001ukf.2_5end |
EntrezGene: | FBRSL1 |
HGNC: | 29308 |
UniProt: | Q9HCM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.15e-20 | 136 |
hematopoietic cell | 7.48e-17 | 177 |
myeloid leukocyte | 7.61e-17 | 72 |
hematopoietic stem cell | 1.18e-16 | 168 |
classical monocyte | 1.28e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-15 | 42 |
granulocyte monocyte progenitor cell | 1.43e-15 | 67 |
hematopoietic oligopotent progenitor cell | 1.56e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-15 | 161 |
myeloid cell | 1.26e-14 | 108 |
common myeloid progenitor | 1.26e-14 | 108 |
macrophage dendritic cell progenitor | 4.10e-14 | 61 |
nongranular leukocyte | 8.25e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 9.24e-14 | 120 |
monopoietic cell | 4.91e-13 | 59 |
monocyte | 4.91e-13 | 59 |
monoblast | 4.91e-13 | 59 |
promonocyte | 4.91e-13 | 59 |
defensive cell | 1.12e-12 | 48 |
phagocyte | 1.12e-12 | 48 |
myeloid lineage restricted progenitor cell | 2.49e-12 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.18e-29 | 114 |
hematopoietic system | 9.73e-16 | 98 |
blood island | 9.73e-16 | 98 |
regional part of nervous system | 7.77e-14 | 53 |
regional part of brain | 7.77e-14 | 53 |
neural tube | 8.58e-14 | 56 |
neural rod | 8.58e-14 | 56 |
future spinal cord | 8.58e-14 | 56 |
neural keel | 8.58e-14 | 56 |
hemolymphoid system | 1.67e-13 | 108 |
regional part of forebrain | 2.36e-11 | 41 |
forebrain | 2.36e-11 | 41 |
anterior neural tube | 2.36e-11 | 41 |
future forebrain | 2.36e-11 | 41 |
bone marrow | 9.05e-11 | 76 |
bone element | 6.38e-10 | 82 |
immune system | 6.81e-10 | 93 |
telencephalon | 7.85e-10 | 34 |
neural plate | 1.78e-09 | 82 |
presumptive neural plate | 1.78e-09 | 82 |
brain grey matter | 2.29e-09 | 34 |
gray matter | 2.29e-09 | 34 |
regional part of cerebral cortex | 3.28e-09 | 22 |
regional part of telencephalon | 4.50e-09 | 32 |
cerebral hemisphere | 4.60e-09 | 32 |
brain | 4.89e-09 | 68 |
future brain | 4.89e-09 | 68 |
neurectoderm | 8.24e-09 | 86 |
neocortex | 1.37e-08 | 20 |
central nervous system | 7.43e-08 | 81 |
cerebral cortex | 2.79e-07 | 25 |
pallium | 2.79e-07 | 25 |
pre-chordal neural plate | 3.07e-07 | 61 |
ecto-epithelium | 6.49e-07 | 104 |