FFCP PHASE1:Hg19::chr19:36630961..36631044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=826 | |EntrezGene=826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1481 | |HGNC=1481 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002odl.2_5end | |association_with_transcript=0bp_to_uc002odl.2_5end | ||
|cluster_id=chr19:36630961..36631044,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_CAPNS1_5end | |description=CAGE_peak_1_at_CAPNS1_5end | ||
|id=chr19:36630961..36631044,+ | |id=chr19:36630961..36631044,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.45e-29!591;CL:0000144!6.65e-25!625;CL:0000222!2.08e-24!119;CL:0000055!4.86e-23!180;CL:0000183!1.88e-20!59;CL:0000548!3.98e-20!679;CL:0000004!3.98e-20!679;CL:0000255!3.98e-20!679;CL:0000012!2.95e-19!682;CL:0000680!1.19e-18!57;CL:0000056!1.19e-18!57;CL:0000355!1.19e-18!57;CL:0000187!1.02e-17!54;CL:0000192!3.42e-17!42;CL:0000514!3.42e-17!42;CL:0000220!3.08e-16!246;CL:0002321!9.40e-16!248;CL:0000359!2.20e-15!32;CL:0000393!1.50e-13!60;CL:0000211!1.50e-13!60;CL:0000057!1.21e-10!75;CL:0000003!8.40e-09!722;CL:0002078!9.99e-09!44;CL:0000115!4.38e-08!35;CL:1000449!4.79e-08!16;CL:0000723!1.52e-07!436;CL:0000048!2.18e-07!430;CL:0000213!7.70e-07!57;CL:0000215!7.70e-07!57;CL:0002681!9.68e-07!13;CL:0002584!9.68e-07!13 | |ontology_enrichment_celltype=CL:0002371!1.45e-29!591;CL:0000144!6.65e-25!625;CL:0000222!2.08e-24!119;CL:0000055!4.86e-23!180;CL:0000183!1.88e-20!59;CL:0000548!3.98e-20!679;CL:0000004!3.98e-20!679;CL:0000255!3.98e-20!679;CL:0000012!2.95e-19!682;CL:0000680!1.19e-18!57;CL:0000056!1.19e-18!57;CL:0000355!1.19e-18!57;CL:0000187!1.02e-17!54;CL:0000192!3.42e-17!42;CL:0000514!3.42e-17!42;CL:0000220!3.08e-16!246;CL:0002321!9.40e-16!248;CL:0000359!2.20e-15!32;CL:0000393!1.50e-13!60;CL:0000211!1.50e-13!60;CL:0000057!1.21e-10!75;CL:0000003!8.40e-09!722;CL:0002078!9.99e-09!44;CL:0000115!4.38e-08!35;CL:1000449!4.79e-08!16;CL:0000723!1.52e-07!436;CL:0000048!2.18e-07!430;CL:0000213!7.70e-07!57;CL:0000215!7.70e-07!57;CL:0002681!9.68e-07!13;CL:0002584!9.68e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.70e-14;32!CL:0000192;1.16e-12;43!CL:0000187;1.12e-09;55!CL:1000449;7.90e-08;15!CL:0000393;2.82e-07;61!CL:0000211;2.82e-07;61!CL:0000115;3.75e-07;36!CL:0002078;9.81e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.15e-25,121;CL:0000680,6.57e-19,58;CL:0000056,6.57e-19,58;CL:0000355,6.57e-19,58;CL:0000187,5.64e-18,55;CL:0000192,1.96e-17,43;CL:0000514,1.96e-17,43;CL:0002321,3.06e-16,250;CL:0000359,2.20e-15,32;CL:0000393,8.33e-14,61;CL:0000211,8.33e-14,61;CL:0000057,1.61e-10,76;CL:0002078,5.30e-09,45;CL:0000115,2.31e-08,36;CL:0000723,7.74e-08,433;CL:1000449,7.92e-08,15;CL:0000048,1.11e-07,427;CL:0000213,4.41e-07,58;CL:0000215,4.41e-07,58;CL:0000034,7.28e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-12;43!CL:0000355;4.56e-10;58!CL:0000222;1.92e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.64e-11;42!UBERON:0003509;1.64e-11;42!UBERON:0004572;1.64e-11;42!UBERON:0004573;2.05e-11;33!UBERON:0004571;2.05e-11;33!UBERON:0007500;1.27e-10;56!UBERON:0001981;1.27e-10;56!UBERON:0004537;1.27e-10;56!UBERON:0003914;2.10e-10;74!UBERON:0002049;2.32e-09;75!UBERON:0007798;2.32e-09;75!UBERON:0000055;3.52e-09;65!UBERON:0006555;7.90e-08;15!UBERON:0004819;7.90e-08;15!UBERON:0001285;7.90e-08;15!UBERON:0007684;7.90e-08;15!UBERON:0000353;7.21e-07;15!UBERON:0000947;7.44e-07;21!UBERON:0010191;7.44e-07;21 | |||
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| ||
|short_description=p1@CAPNS1 | |short_description=p1@CAPNS1 | ||
}} | }} |
Latest revision as of 15:49, 17 September 2015
Short description: | p1@CAPNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPNS1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_uc002odl.2_5end |
EntrezGene: | CAPNS1 |
HGNC: | 1481 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.15e-25 | 121 |
muscle precursor cell | 6.57e-19 | 58 |
myoblast | 6.57e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.57e-19 | 58 |
muscle cell | 5.64e-18 | 55 |
smooth muscle cell | 1.96e-17 | 43 |
smooth muscle myoblast | 1.96e-17 | 43 |
embryonic cell | 3.06e-16 | 250 |
vascular associated smooth muscle cell | 2.20e-15 | 32 |
electrically responsive cell | 8.33e-14 | 61 |
electrically active cell | 8.33e-14 | 61 |
fibroblast | 1.61e-10 | 76 |
meso-epithelial cell | 5.30e-09 | 45 |
endothelial cell | 2.31e-08 | 36 |
somatic stem cell | 7.74e-08 | 433 |
epithelial cell of nephron | 7.92e-08 | 15 |
multi fate stem cell | 1.11e-07 | 427 |
lining cell | 4.41e-07 | 58 |
barrier cell | 4.41e-07 | 58 |
stem cell | 7.28e-07 | 441 |