FFCP PHASE1:Hg19::chr2:55255325..55255358,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:55255325..55255358,-
|short_description=p39@RTN4
|description=CAGE_peak_39_at_RTN4_5end
|association_with_transcript=380bp_to_AB073359_5end
|EntrezGene=57...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q3LIF1 | |UniProt=Q3LIF1 | ||
|association_with_transcript=380bp_to_AB073359_5end | |||
|cluster_id=chr2:55255325..55255358,- | |||
|description=CAGE_peak_39_at_RTN4_5end | |||
|id=chr2:55255325..55255358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.25e-31!57;UBERON:0005068!7.25e-31!57;UBERON:0006241!7.25e-31!57;UBERON:0007135!7.25e-31!57;UBERON:0001017!1.66e-28!82;UBERON:0005743!1.97e-26!86;UBERON:0002616!1.01e-25!59;UBERON:0000955!4.05e-25!69;UBERON:0006238!4.05e-25!69;UBERON:0002020!4.40e-25!34;UBERON:0003528!4.40e-25!34;UBERON:0001893!1.22e-24!34;UBERON:0002780!1.74e-24!41;UBERON:0001890!1.74e-24!41;UBERON:0006240!1.74e-24!41;UBERON:0003080!1.16e-23!42;UBERON:0002791!1.77e-23!33;UBERON:0003075!4.58e-23!86;UBERON:0007284!4.58e-23!86;UBERON:0001869!1.28e-22!32;UBERON:0002346!1.74e-22!90;UBERON:0000073!2.03e-22!94;UBERON:0001016!2.03e-22!94;UBERON:0000956!2.43e-17!25;UBERON:0000203!2.43e-17!25;UBERON:0003056!3.37e-17!61;UBERON:0007023!7.91e-17!115;UBERON:0002619!1.96e-16!22;UBERON:0001950!2.69e-14!20;UBERON:0000033!3.40e-13!123;UBERON:0000153!1.56e-12!129;UBERON:0007811!1.56e-12!129;UBERON:0004121!6.75e-10!169;UBERON:0000924!7.08e-10!173;UBERON:0006601!7.08e-10!173;UBERON:0002308!2.53e-09!9;UBERON:0000125!2.53e-09!9;UBERON:0002298!1.68e-08!8;UBERON:0003076!2.59e-08!15;UBERON:0003057!2.59e-08!15;UBERON:0001872!1.76e-07!5;UBERON:0002420!4.66e-07!9;UBERON:0007245!4.66e-07!9;UBERON:0010009!4.66e-07!9;UBERON:0010011!4.66e-07!9;UBERON:0000454!4.66e-07!9;UBERON:0000025!5.56e-07!194;UBERON:0004733!7.01e-07!12;UBERON:0002028!7.01e-07!12;UBERON:0007277!7.01e-07!12;UBERON:0009663!8.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.22e-31;20!UBERON:0002619;3.88e-28;22!UBERON:0000956;6.79e-25;25!UBERON:0000203;6.79e-25;25!UBERON:0003528;9.64e-19;34!UBERON:0002020;9.64e-19;34!UBERON:0002791;1.29e-18;32!UBERON:0001869;2.26e-18;32!UBERON:0001893;1.45e-15;34!UBERON:0001872;1.56e-15;5!UBERON:0002021;2.33e-15;5!UBERON:0000200;4.13e-13;6!UBERON:0000073;7.59e-11;53!UBERON:0002616;7.59e-11;53!UBERON:0002771;1.50e-10;2!UBERON:0002148;2.48e-10;2!UBERON:0002702;2.48e-10;2!UBERON:0006331;2.48e-10;2!UBERON:0009662;2.48e-10;2!UBERON:0002780;3.11e-10;41!UBERON:0001890;3.11e-10;41!UBERON:0002680;5.86e-09;9!UBERON:0001895;5.86e-09;9!UBERON:0001016;2.02e-07;83!UBERON:0000955;2.03e-07;68!UBERON:0000988;2.63e-07;3!UBERON:0001870;2.63e-07;3!UBERON:0001017;5.53e-07;75!UBERON:0004733;6.16e-07;12!UBERON:0002028;6.16e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.12e-30,20;UBERON:0002619,5.17e-28,22;UBERON:0003528,7.81e-25,34;UBERON:0002020,7.81e-25,34;UBERON:0000956,8.74e-25,25;UBERON:0000203,8.74e-25,25;UBERON:0000073,6.82e-21,53;UBERON:0002616,6.82e-21,53;UBERON:0001049,8.96e-20,56;UBERON:0005068,8.96e-20,56;UBERON:0006241,8.96e-20,56;UBERON:0007135,8.96e-20,56;UBERON:0002791,1.58e-19,32;UBERON:0001869,1.58e-19,32;UBERON:0001893,2.08e-18,34;UBERON:0000955,4.97e-16,68;UBERON:0006238,4.97e-16,68;UBERON:0001872,2.02e-15,5;UBERON:0002780,2.49e-15,41;UBERON:0001890,2.49e-15,41;UBERON:0003080,2.49e-15,41;UBERON:0006240,2.49e-15,41;UBERON:0002021,2.90e-15,5;UBERON:0001017,1.88e-13,81;UBERON:0003075,1.88e-13,82;UBERON:0007284,1.88e-13,82;UBERON:0000200,4.01e-13,6;UBERON:0002346,8.21e-13,86;UBERON:0001016,4.33e-12,89;UBERON:0002771,1.43e-10,2;UBERON:0010371,1.56e-10,104;UBERON:0003056,2.40e-10,61;UBERON:0002702,2.49e-10,2;UBERON:0002148,2.99e-10,2;UBERON:0006331,2.99e-10,2;UBERON:0009662,2.99e-10,2;UBERON:0002680,5.42e-09,9;UBERON:0001895,5.42e-09,9;UBERON:0010092,5.42e-09,9;UBERON:0010314,3.35e-08,132;UBERON:0001870,2.63e-07,3;UBERON:0000988,2.97e-07,3;UBERON:0004733,5.81e-07,12;UBERON:0002028,5.81e-07,12;UBERON:0007277,5.81e-07,12 | |||
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| ||
|short_description=p39@RTN4 | |||
}} | }} |
Latest revision as of 16:51, 17 September 2015
Short description: | p39@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 380bp_to_AB073359_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q3LIF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neutrophil | 2.19e-07 | 3 |