FFCP PHASE1:Hg19::chr3:24536231..24536249,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7068 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11799 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000447875_5end | |||
|cluster_id=chr3:24536231..24536249,- | |||
|description=CAGE_peak_4_at_THRB_5end | |||
|id=chr3:24536231..24536249,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.40e-09;31!UBERON:0009497;9.91e-08;13 | |||
|ontology_enrichment_disease=DOID:305!1.43e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.29e-34!115;UBERON:0003080!7.18e-19!42;UBERON:0002780!1.86e-18!41;UBERON:0001890!1.86e-18!41;UBERON:0006240!1.86e-18!41;UBERON:0005743!2.05e-18!86;UBERON:0001049!3.30e-18!57;UBERON:0005068!3.30e-18!57;UBERON:0006241!3.30e-18!57;UBERON:0007135!3.30e-18!57;UBERON:0001017!5.66e-18!82;UBERON:0000955!1.14e-16!69;UBERON:0006238!1.14e-16!69;UBERON:0000073!1.79e-16!94;UBERON:0001016!1.79e-16!94;UBERON:0002616!2.30e-15!59;UBERON:0001950!1.24e-14!20;UBERON:0002020!1.71e-14!34;UBERON:0003528!1.71e-14!34;UBERON:0001893!1.74e-14!34;UBERON:0001869!3.39e-14!32;UBERON:0002619!6.83e-14!22;UBERON:0002791!7.26e-14!33;UBERON:0003075!1.00e-13!86;UBERON:0007284!1.00e-13!86;UBERON:0004121!2.49e-13!169;UBERON:0003056!4.33e-13!61;UBERON:0000153!1.97e-12!129;UBERON:0007811!1.97e-12!129;UBERON:0000924!2.45e-12!173;UBERON:0006601!2.45e-12!173;UBERON:0002346!3.26e-12!90;UBERON:0000033!4.88e-12!123;UBERON:0000956!3.53e-11!25;UBERON:0000203!3.53e-11!25;UBERON:0000481!1.10e-10!347;UBERON:0000064!4.69e-10!219;UBERON:0000062!5.79e-10!511;UBERON:0000475!4.15e-08!365;UBERON:0001007!4.47e-07!155;UBERON:0001555!4.47e-07!155;UBERON:0007026!4.47e-07!155;UBERON:0004921!7.95e-07!129;UBERON:0004185!7.95e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.25e-21;20!UBERON:0002619;2.72e-19;22!UBERON:0000956;1.81e-16;25!UBERON:0000203;1.81e-16;25!UBERON:0001869;1.69e-15;32!UBERON:0002780;3.19e-14;41!UBERON:0001890;3.19e-14;41!UBERON:0002791;8.73e-14;32!UBERON:0003528;1.24e-13;34!UBERON:0002020;1.24e-13;34!UBERON:0001893;3.27e-13;34!UBERON:0000073;8.80e-09;53!UBERON:0002616;8.80e-09;53!UBERON:0001872;6.95e-08;5!UBERON:0000955;2.81e-07;68!UBERON:0000200;8.61e-07;6!UBERON:0001017;9.89e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.38e-22,20;UBERON:0007023,3.02e-20,114;UBERON:0002619,1.70e-19,22;UBERON:0002780,1.63e-18,41;UBERON:0001890,1.63e-18,41;UBERON:0003080,1.63e-18,41;UBERON:0006240,1.63e-18,41;UBERON:0001869,6.48e-17,32;UBERON:0000956,1.20e-16,25;UBERON:0000203,1.20e-16,25;UBERON:0001893,1.32e-15,34;UBERON:0003528,2.07e-15,34;UBERON:0002020,2.07e-15,34;UBERON:0000073,3.72e-15,53;UBERON:0002616,3.72e-15,53;UBERON:0002791,3.98e-15,32;UBERON:0001049,5.87e-14,56;UBERON:0005068,5.87e-14,56;UBERON:0006241,5.87e-14,56;UBERON:0007135,5.87e-14,56;UBERON:0000955,2.79e-13,68;UBERON:0006238,2.79e-13,68;UBERON:0011216,3.94e-13,223;UBERON:0001017,5.45e-13,81;UBERON:0001016,9.41e-12,89;UBERON:0003056,2.49e-11,61;UBERON:0003075,7.42e-10,82;UBERON:0007284,7.42e-10,82;UBERON:0002346,4.71e-09,86;UBERON:0001872,2.14e-08,5;UBERON:0010314,3.95e-07,132;UBERON:0010371,7.04e-07,104 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,1.52908960491121,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,2.27685187643779,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0,0,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.847727604638247,0,0.103052529238439,0,0,0,0.292311015483596,0,0.276149695926898,0,0,0,0,0.193260853163297,0,0.286804595389004,1.21973706129595,1.98794652482228,0.69716365721711,0.932949495138334,1.00928340350251,4.01475094983413,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,6.51838724278502,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,1.58040879591855,0,0.246217006087397,0,0.445893486866185,0,0,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,2.60279707715243,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0.106727557803444,0.606255142892519,0,1.20956117331872,0,0.767309866440312,0.841980283299221,0,0,0,0,0,0,0.0821271560138091,0,0,8.21844257223031,0.200506470303285,0.368323955743585,0,0,0,0,0.616122696835318,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0.764628819135115,0,0.671624264166535,0,0,0.512900250232778,0,0.325378394664303,1.33953315142039,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.413509717453592,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.48111056362756,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.811367035427949,1.6653598399891,0,0,1.17206543417515,0,0,0,1.67121139316383,3.26661148915902,0,0.994147647766298,1.1253553312841,1.00177834520615,0,0,2.19172787076177,0.276283915531148,0,0.715880777515084,0,0,1.25815691606258,2.14825409610731,0,1.08507746200627,0,0,2.90799823828566,1.02044907978036,3.99227596002388,0.520855522170466,0.437299999980979,0.724999575434793,0.796554137998498,0.254253650292766,1.41832609060762,0,0,0,0.885741385813839,0.60298219312704,0,1.10579259931225,0.295547618953547,1.97446857438575,0,0.139423744278603,0.307801034015188,0.113942055847001,2.53620294826866,1.88491053260521,4.45454224880233,2.23300811812344,0.641183153813036,3.19820865611181,0,0,0,0,0.784250137270958,0.167821586975843,0,0.794682894901893,0,1.79556088975062,1.97894300007517,0,0,1.23840590304675,1.22206028986725,0,0,0,0.337005664903385,1.60515529459758,0.702793337176017,0,1.36965233252463,0,0.789168805698781,2.41981432097328,2.75465485467441,0.31593289814244,0.300646838828985,0.311064574191741,0,0,0,0,1.42304773014896,0,0.173559738335131,0.293977192243133,0,0.34945333648406,0,0.290268993867255,0.365446585430928,0.246346371159628,0.484945082442097,0,0.90392296312213,0,0,1.58276989889697,0.391102765469606,0.160317640503067,0.85381197895741,0,0.576361668616424,0,26.4256296707425,0.14405479798815,0,0.942776138467182,0,0,0.203996435272644,0.288950589901519,1.20084057741958,0.410716136675979,0,0,0,1.39641200636127,2.06244381610515,0.717873024576814,1.59743200399193,2.57535628881943,0.89268582976749,0.0671834724867263,0,4.65983798109815,2.59984501613838,2.06039645952916,2.49393112260484,1.18112977817699,0,0,0.681017030557878,0.643012593860077,0.275078873194468,1.66176135211674,0.2249738915515,0,1.57948847310864,0,1.73372556058236,2.25554728980492,0,0,1.53532157855556,0,3.97255182219259,0,0,0,0,0,2.38068310173083,0,0.339936274560377,1.02586563574658,0,1.0342636508924,0.52893040697076,0.513260513652988,0.704815022316672,0.533937062838473,0.471612915298998,0.414239055347196,0.992332043623902,0,0,0.638341257770182,1.08803560673895,1.2534494701135,0.919036730290385,1.31149052283922,0,2.65820453990096,0.732157589411779,1.1267183763585,0.573409195690071,0.221858103073705,0.496771223531068,0.553394539744923,0.249960815924213,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| |||
|short_description=p4@THRB | |||
}} |
Latest revision as of 20:14, 17 September 2015
Short description: | p4@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_THRB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447875_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 7.38e-22 | 20 |
adult organism | 3.02e-20 | 114 |
regional part of cerebral cortex | 1.70e-19 | 22 |
regional part of forebrain | 1.63e-18 | 41 |
forebrain | 1.63e-18 | 41 |
anterior neural tube | 1.63e-18 | 41 |
future forebrain | 1.63e-18 | 41 |
cerebral hemisphere | 6.48e-17 | 32 |
cerebral cortex | 1.20e-16 | 25 |
pallium | 1.20e-16 | 25 |
telencephalon | 1.32e-15 | 34 |
brain grey matter | 2.07e-15 | 34 |
gray matter | 2.07e-15 | 34 |
regional part of nervous system | 3.72e-15 | 53 |
regional part of brain | 3.72e-15 | 53 |
regional part of telencephalon | 3.98e-15 | 32 |
neural tube | 5.87e-14 | 56 |
neural rod | 5.87e-14 | 56 |
future spinal cord | 5.87e-14 | 56 |
neural keel | 5.87e-14 | 56 |
brain | 2.79e-13 | 68 |
future brain | 2.79e-13 | 68 |
organ system subdivision | 3.94e-13 | 223 |
central nervous system | 5.45e-13 | 81 |
nervous system | 9.41e-12 | 89 |
pre-chordal neural plate | 2.49e-11 | 61 |
neural plate | 7.42e-10 | 82 |
presumptive neural plate | 7.42e-10 | 82 |
neurectoderm | 4.71e-09 | 86 |
parietal lobe | 2.14e-08 | 5 |
structure with developmental contribution from neural crest | 3.95e-07 | 132 |
ecto-epithelium | 7.04e-07 | 104 |