FFCP PHASE1:Hg19::chr16:79633894..79633954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4094 | |EntrezGene=4094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6776 | |HGNC=6776 | ||
|TSSclassifier=strong | |||
|UniProt=O75444 | |UniProt=O75444 | ||
|association_with_transcript=0bp_to_BC081542_5end | |association_with_transcript=0bp_to_BC081542_5end | ||
|cluster_id=chr16:79633894..79633954,- | |||
|coexpression_cluster_id=C761 | |coexpression_cluster_id=C761 | ||
|description=CAGE_peak_3_at_MAF_5end | |description=CAGE_peak_3_at_MAF_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-34!115;UBERON:0001049!1.53e-14!57;UBERON:0005068!1.53e-14!57;UBERON:0006241!1.53e-14!57;UBERON:0007135!1.53e-14!57;UBERON:0005743!7.92e-14!86;UBERON:0002616!5.25e-13!59;UBERON:0001017!5.26e-13!82;UBERON:0000153!8.06e-13!129;UBERON:0007811!8.06e-13!129;UBERON:0003075!2.84e-12!86;UBERON:0007284!2.84e-12!86;UBERON:0000955!1.94e-11!69;UBERON:0006238!1.94e-11!69;UBERON:0000033!5.09e-11!123;UBERON:0000073!8.72e-11!94;UBERON:0001016!8.72e-11!94;UBERON:0003080!1.38e-10!42;UBERON:0002346!2.41e-10!90;UBERON:0002780!4.33e-10!41;UBERON:0001890!4.33e-10!41;UBERON:0006240!4.33e-10!41;UBERON:0001893!8.13e-10!34;UBERON:0003056!8.77e-10!61;UBERON:0002020!1.31e-09!34;UBERON:0003528!1.31e-09!34;UBERON:0002791!1.43e-09!33;UBERON:0001869!7.09e-09!32;UBERON:0002619!1.05e-07!22;UBERON:0000956!3.03e-07!25;UBERON:0000203!3.03e-07!25;UBERON:0001950!4.38e-07!20;UBERON:0004121!4.40e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!5.18e-34!115;UBERON:0001049!1.53e-14!57;UBERON:0005068!1.53e-14!57;UBERON:0006241!1.53e-14!57;UBERON:0007135!1.53e-14!57;UBERON:0005743!7.92e-14!86;UBERON:0002616!5.25e-13!59;UBERON:0001017!5.26e-13!82;UBERON:0000153!8.06e-13!129;UBERON:0007811!8.06e-13!129;UBERON:0003075!2.84e-12!86;UBERON:0007284!2.84e-12!86;UBERON:0000955!1.94e-11!69;UBERON:0006238!1.94e-11!69;UBERON:0000033!5.09e-11!123;UBERON:0000073!8.72e-11!94;UBERON:0001016!8.72e-11!94;UBERON:0003080!1.38e-10!42;UBERON:0002346!2.41e-10!90;UBERON:0002780!4.33e-10!41;UBERON:0001890!4.33e-10!41;UBERON:0006240!4.33e-10!41;UBERON:0001893!8.13e-10!34;UBERON:0003056!8.77e-10!61;UBERON:0002020!1.31e-09!34;UBERON:0003528!1.31e-09!34;UBERON:0002791!1.43e-09!33;UBERON:0001869!7.09e-09!32;UBERON:0002619!1.05e-07!22;UBERON:0000956!3.03e-07!25;UBERON:0000203!3.03e-07!25;UBERON:0001950!4.38e-07!20;UBERON:0004121!4.40e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.13e-09;114!UBERON:0001893;6.88e-09;34!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0002791;1.35e-08;32!UBERON:0002619;2.13e-08;22!UBERON:0000073;2.18e-08;53!UBERON:0002616;2.18e-08;53!UBERON:0001869;2.27e-08;32!UBERON:0002780;3.15e-08;41!UBERON:0001890;3.15e-08;41!UBERON:0001950;1.02e-07;20!UBERON:0000956;1.54e-07;25!UBERON:0000203;1.54e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.13e-09;114!UBERON:0001893;6.88e-09;34!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0002791;1.35e-08;32!UBERON:0002619;2.13e-08;22!UBERON:0000073;2.18e-08;53!UBERON:0002616;2.18e-08;53!UBERON:0001869;2.27e-08;32!UBERON:0002780;3.15e-08;41!UBERON:0001890;3.15e-08;41!UBERON:0001950;1.02e-07;20!UBERON:0000956;1.54e-07;25!UBERON:0000203;1.54e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.47e-37,114;UBERON:0001049,7.95e-15,56;UBERON:0005068,7.95e-15,56;UBERON:0006241,7.95e-15,56;UBERON:0007135,7.95e-15,56;UBERON:0003075,1.34e-13,82;UBERON:0007284,1.34e-13,82;UBERON:0000073,2.58e-13,53;UBERON:0002616,2.58e-13,53;UBERON:0001017,1.02e-12,81;UBERON:0002346,7.35e-12,86;UBERON:0000955,9.48e-12,68;UBERON:0006238,9.48e-12,68;UBERON:0002780,1.05e-10,41;UBERON:0001890,1.05e-10,41;UBERON:0003080,1.05e-10,41;UBERON:0006240,1.05e-10,41;UBERON:0001893,2.27e-10,34;UBERON:0003528,3.84e-10,34;UBERON:0002020,3.84e-10,34;UBERON:0003056,4.66e-10,61;UBERON:0001016,1.08e-09,89;UBERON:0002791,1.36e-09,32;UBERON:0010371,1.63e-09,104;UBERON:0001869,2.48e-09,32;UBERON:0010314,1.40e-08,132;UBERON:0002619,1.95e-08,22;UBERON:0001950,9.63e-08,20;UBERON:0000956,1.63e-07,25;UBERON:0000203,1.63e-07,25;UBERON:0011216,3.21e-07,223 | |||
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|phase1_expression=3.81524596468169,1.92690471501885,5.92008497203079,0,2.68176656656373,1.74467704820074,2.53299878168311,0,8.35794010239483,0.491467873003018,0.697801167972428,0,0.263766978228454,10.2726072956839,4.97096063591874,1.34465029290355,0,0,0,2.83178433576612,0.408001382488506,3.13454721478088,2.0036519099174,0.821246550437305,1.38096903554283,0,0,0,23.2084923340853,8.06041736004147,2.78669021968937,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,1.10799081706375,3.40925560699241,2.17010870715852,47.6939960131039,23.9681312854045,43.0151197949092,0,0.755751887377619,0.970336244751265,0.697287110717054,0.411167888021826,0.309706370895104,5.17846306179871,4.35473201099471,2.60130452877444,0.344745680736619,0.645484683583826,0,0.188242339542605,0.818718450173537,0,0,0.320929027076094,1.27867425159808,6.92687730392104,10.7710375115681,8.95071976118658,0.580418477257168,0,0,2.76373531782418,5.73631210262222,3.04064382587163,3.02699751316684,0.368277635987565,0,0.211255286311942,0.850417199860174,0.209658645508376,0,0.150176892841506,0,0.570025487482497,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0.263384084775077,1.37696839079683,9.03924754323079,10.6912779479745,9.86400322805001,0.651844533267181,0.946895611469467,1.94826728407911,19.1625985842499,14.435689466267,19.4949827233587,14.0818009157808,25.7463552648607,22.3702077802991,2.46656856905514,1.65810010671509,2.02862160014537,0.741432815810302,0,0,8.61151004501503,13.4127172760672,20.6176467289578,13.6630633690532,7.32700452945422,7.81300144627702,3.8018081777935,2.86092726247768,5.37543766848557,14.9916871862815,10.8917535940248,7.39015197228942,18.7494271199001,13.6394499849589,8.68946423296794,2.43806866313962,4.02420515822182,2.9408389224012,3.97583067623023,7.01873074890245,12.4568006306308,0,14.1124112387764,5.19941494402373,3.76939975686359,3.95256535619067,14.9971041444881,1.82147644146271,2.22470665670658,9.08732702233113,8.88061660226263,7.84451967061304,0,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,1.33888245105868,4.02829317109147,6.0821768457481,15.6199716830828,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,6.10531672999548,0,0.12663051166458,0,0,0,6.16745360156538,1.06748995729705,0.49333509683432,6.22422070799533,0,0,3.02714855289863,3.45705554687999,0.234321431833797,0,0,0,0.587172493218824,0.485618833104395,0.280901613404497,0.204154171254893,0,2.16984140469107,9.50402285825643,5.43987244412825,0.910161361938026,0,0.336672227908132,0.500474079487857,0,3.95079858792754,0.612975591598039,7.66214100423644,0,0.89694817844431,3.20336083227851,0.211931901159562,0,0,0.257640540045629,0.558350568994769,0,0.0974370051611986,0.504867548488229,1.19664868234989,1.61646056818812,0,0.705264687593482,0,2.70565194428616,3.27295344709002,0.860413786167011,3.78118489001746,6.22889911110981,6.27447291495399,8.18922334621426,5.80337957013945,0.36497735907583,0,4.5026865673502,0,0,0,0,0,0,0,0,0,0,0,0,19.1920418202409,1.40241773803446,11.1124983059478,2.94017422771084,2.53510069643662,0.982827216677626,5.90789906681404,0,0.860919069801795,4.80389868835872,2.30475599358114,2.24803506515239,0.804231779293047,7.68484094815796,0,0,1.44331342025273,25.1568978795917,8.21860859650752,2.59859605969933,1.38895653772983,2.28304982681518,0,0,16.4965394078556,1.40402559083543,6.53977114070404,0.93733833986777,4.03157107677263,3.1190521393325,0.53735113621709,0.871901815541886,1.53353071666084,2.46331618947972,15.4965243863278,2.69526550203004,6.19715799692934,3.40854570251226,3.6828778689458,4.96584953225761,3.51652341630141,3.4214489204541,1.85089486865982,0.600686115687835,2.85826432630578,0.448524337381443,2.1798003441664,0.4400297149257,0.904902010304444,0,0,0,0,0.257207374262142,0,0,1.71573592389777,2.71310802695722,0,0,0.710783897485092,0,22.3065139024094,2.61460037580088,17.595246448042,8.51366464488333,12.054170194371,4.21667878966063,0.479249710983165,2.29723871668228,0,0,2.67119219315498,1.07436577943937,4.9317463357152,8.86638420908672,10.3501235932568,10.2674429023799,8.63921722356376,2.60279707715243,1.54657762555539,1.17261385734044,1.91381625495949,0,0,2.07207756718018,8.46571292862065,8.50289885801451,3.7977103317963,1.03985430765404,1.42743191037729,0,0.585707074963566,4.51419149591578,13.6444502433591,1.03473071292505,0.664225598535437,2.76553752812555,7.99329253106362,21.146525005976,10.6374461381365,4.54889657470352,2.5885704098234,6.83056369942044,0.303127571446259,0,0.604780586659361,0.744323423456331,1.68808170616869,0.841980283299221,2.69092213436972,0.511707249066704,1.12597744800525,0,0.462629081407967,0.710246901252508,0.164254312027618,0,0.581051892299796,0.604297247958111,0.802025881213139,0.368323955743585,1.83703117063371,0,1.57349297951309,0.902399225814824,1.30926073077505,2.35304930753057,0,2.53323909342902,3.4120015221269,2.2112181685947,0.431831832204279,9.25363516141736,6.23176806350862,11.53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| ||
|short_description=p3@MAF | |short_description=p3@MAF | ||
}} | }} |
Latest revision as of 23:49, 17 September 2015
Short description: | p3@MAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAF_5end |
Coexpression cluster: | C761_myeloma_CD14_small_CD4_colon_duodenum_lymph |
Association with transcript: | 0bp_to_BC081542_5end |
EntrezGene: | MAF |
HGNC: | 6776 |
UniProt: | O75444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.47e-37 | 114 |
neural tube | 7.95e-15 | 56 |
neural rod | 7.95e-15 | 56 |
future spinal cord | 7.95e-15 | 56 |
neural keel | 7.95e-15 | 56 |
neural plate | 1.34e-13 | 82 |
presumptive neural plate | 1.34e-13 | 82 |
regional part of nervous system | 2.58e-13 | 53 |
regional part of brain | 2.58e-13 | 53 |
central nervous system | 1.02e-12 | 81 |
neurectoderm | 7.35e-12 | 86 |
brain | 9.48e-12 | 68 |
future brain | 9.48e-12 | 68 |
regional part of forebrain | 1.05e-10 | 41 |
forebrain | 1.05e-10 | 41 |
anterior neural tube | 1.05e-10 | 41 |
future forebrain | 1.05e-10 | 41 |
telencephalon | 2.27e-10 | 34 |
brain grey matter | 3.84e-10 | 34 |
gray matter | 3.84e-10 | 34 |
pre-chordal neural plate | 4.66e-10 | 61 |
nervous system | 1.08e-09 | 89 |
regional part of telencephalon | 1.36e-09 | 32 |
ecto-epithelium | 1.63e-09 | 104 |
cerebral hemisphere | 2.48e-09 | 32 |
structure with developmental contribution from neural crest | 1.40e-08 | 132 |
regional part of cerebral cortex | 1.95e-08 | 22 |
neocortex | 9.63e-08 | 20 |
cerebral cortex | 1.63e-07 | 25 |
pallium | 1.63e-07 | 25 |
organ system subdivision | 3.21e-07 | 223 |