FFCP PHASE1:Hg19::chr8:41166953..41166999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6422 | |EntrezGene=6422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10776 | |HGNC=10776 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N474 | |UniProt=Q8N474 | ||
|association_with_transcript=0bp_to_ENST00000535263,NM_003012,uc003xnt.2_5end | |association_with_transcript=0bp_to_ENST00000535263,NM_003012,uc003xnt.2_5end | ||
|cluster_id=chr8:41166953..41166999,- | |||
|coexpression_cluster_id=C863 | |coexpression_cluster_id=C863 | ||
|description=CAGE_peak_1_at_SFRP1_5end | |description=CAGE_peak_1_at_SFRP1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.51e-18!180;CL:0000057!2.93e-12!75;CL:0000393!3.89e-10!60;CL:0000211!3.89e-10!60;CL:0000192!1.09e-09!42;CL:0000514!1.09e-09!42;CL:0000183!2.47e-08!59;CL:0000187!2.92e-08!54;CL:0000680!5.30e-08!57;CL:0000056!5.30e-08!57;CL:0000355!5.30e-08!57;CL:0000359!7.24e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.51e-18!180;CL:0000057!2.93e-12!75;CL:0000393!3.89e-10!60;CL:0000211!3.89e-10!60;CL:0000192!1.09e-09!42;CL:0000514!1.09e-09!42;CL:0000183!2.47e-08!59;CL:0000187!2.92e-08!54;CL:0000680!5.30e-08!57;CL:0000056!5.30e-08!57;CL:0000355!5.30e-08!57;CL:0000359!7.24e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.25e-07;43 | |ontology_enrichment_celltype_v019=CL:0000192;1.25e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.53e-12,76;CL:0000393,2.50e-10,61;CL:0000211,2.50e-10,61;CL:0000192,7.70e-10,43;CL:0000514,7.70e-10,43;CL:0000187,2.03e-08,55;CL:0000680,3.69e-08,58;CL:0000056,3.69e-08,58;CL:0000355,3.69e-08,58;CL:0000359,9.23e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-07;43 | |ontology_enrichment_development_v019=CL:0000514;1.25e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001456;6.57e-10;21!UBERON:0000970;4.84e-09;20!UBERON:0000019;8.78e-09;19!UBERON:0000047;8.78e-09;19!UBERON:0004088;8.78e-09;19!UBERON:0010230;8.78e-09;19!UBERON:0000020;9.91e-09;23!UBERON:0002104;1.73e-08;21!UBERON:0001032;3.00e-08;24!UBERON:0004456;3.00e-08;24!UBERON:0007625;8.03e-08;11!UBERON:0000033;1.50e-07;50!UBERON:0001444;1.66e-07;48!UBERON:0007811;2.31e-07;52!UBERON:0000153;5.26e-07;54!UBERON:0001801;6.63e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0001456;6.57e-10;21!UBERON:0000970;4.84e-09;20!UBERON:0000019;8.78e-09;19!UBERON:0000047;8.78e-09;19!UBERON:0004088;8.78e-09;19!UBERON:0010230;8.78e-09;19!UBERON:0000020;9.91e-09;23!UBERON:0002104;1.73e-08;21!UBERON:0001032;3.00e-08;24!UBERON:0004456;3.00e-08;24!UBERON:0007625;8.03e-08;11!UBERON:0000033;1.50e-07;50!UBERON:0001444;1.66e-07;48!UBERON:0007811;2.31e-07;52!UBERON:0000153;5.26e-07;54!UBERON:0001801;6.63e-07;14 | ||
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|phase1_expression=88.4773707047611,119.68219285506,109.52157198257,116.085026089631,67.4911252585205,362.892826025753,10.1319951267324,10.7392378482561,13.0592814099919,114.266280473202,9.76921635161399,292.27455591017,387.737457995827,19.4313174147273,36.7851087057986,20.842079540005,24.1077811209591,22.6396128020086,27.3242367322684,138.018706104079,261.120884792644,163.93681933304,109.055911096933,144.26564402682,130.187717259811,0,0,0,0,0,0.464448369948228,14.7107395916628,7.53014796945625,11.4623743151704,0,0,0,1.66198622559563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,6.39312809217652,0,1.00267582127178,6.66293987219789,1.5905718941022,22.8718389042239,865.749855588533,665.85338058008,801.492419449775,45.7116973487017,28.4150324868183,45.9772709052692,0,0,0.132957960518865,0,0,0,2.38514888840046,8.60234595106124,0.347140501607594,0,1.25849830862972,0.275118041940067,0.835979866147242,1.03366703667732,3.5576626268671,2.34304428935269,2.81980521976403,4.56163263431108,4.88124115096339,0.735326160691737,1.62028389576352,2.85759130509055,3.14341121676638,1.91439516821648,1.53316637465883,4.74632829784064,4.946447086121,0,0,53.2034743613892,1.49091585508596,16.9684885630537,37.2069798085145,190.172679556464,111.011203628086,20.7450712052654,0,9.62003438826924,20.5399283363846,7.13966561969347,15.2019569895517,24.6712607061238,9.79499071615998,23.6664646152135,32.4646479903533,26.8121756125891,32.280914999189,28.0668451758598,28.1658923200549,32.3036855415172,104.118627339996,220.610433891935,116.861458509791,64.1521542932309,60.0858638146893,25.4845181342647,29.4633438144658,77.4346124188705,55.0521487436642,92.5394145717171,40.8249187419179,9.50112166976961,167.214959563042,3.17610112848059,9.68704032719855,11.9592137738398,174.631886555479,47.71448427742,44.4156401017672,2.83404594050192,5.76962254627928,62.6160192615098,109.811504816671,29.0298840380732,72.6273700287742,26.671599375104,41.1811127319273,20.0496675473004,40.694542154517,3.09217365061275,0.545492241181669,0.573609190778008,58.5473789422058,225.035546609882,65.4171898355388,44.8852368216554,55.5105871926382,196.357819182797,4.69348596989448,21.8701918985581,19.3388889893473,73.8345005570847,35.3720946018097,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,1.4763109092493,0,6.5851841813024,14.7008711385542,0,0,4.13552934676983,0,0,375.905072364069,27.9863227791995,10.1161577931858,25.333301047731,4.35165692245089,11.7290989911717,141.431130798023,555.675666797302,248.67071867154,166.602937120631,1.87676382089396,1.85194205030644,3.04406643575357,0,0,0,0,0,0,0.503946384596579,1.27597587518148,57.0487789617144,89.5152530623003,106.580384807929,0,0,1.65862492432618,2.45003920808834,11.7405463086533,1.14296209725904,1.90994212779139,0,5.13217338068116,8.22619941626588,0,0,46.5344000033247,12.6428419961651,52.5102126478002,23.7859956994311,7.15312891703765,1.690605505112,13.8287820624133,19.7614130131596,5.14414748524284,22.6958611237245,13.5875311298211,4.86125178437702,1.62786481617433,3.29296134712308,3.58309802723109,2.13235169245527,1.58390374586686,5.12446941001296,0.871533458600294,3.59902768255405,0,0,0,0.239624855491583,3.44585807502342,2.85273810081437,19.255913786788,4.31500277355805,2.32779252211864,0,0,0,0,86.1380776114151,58.5629342359298,31.7048413238855,36.6860621082224,27.431366321086,0.749007023947182,2.99161459204025,1.24324654030811,10.0607023209695,22.5076734476855,36.6207781994643,60.9354624285265,12.3116002270042,2.36553622550902,47.9108387320197,27.3860950752224,9.09630016223939,12.4167685551006,0.664225598535437,8.66535092146005,142.054709655315,21.7339284783642,7.20601190002797,0.206768026122887,0,0,20.6126748583456,309.569917489525,101.603138558773,58.8015504530501,105.581837622187,64.5518217196069,133.008436927418,94.6658410773401,56.138018479119,280.510145581033,9.86942040336996,7.99027763909072,26.9377071725294,277.801119613237,10.1103029260165,0,28.0709058424599,42.2651739215764,34.444334449382,186.279264870872,135.320396238126,18.9503837421113,11.8603619140799,26.6678921520131,67.2240433404999,26.1768039654332,1.13733384070897,4.42243633718941,14.8981982110476,7.71136263451447,24.3851793789468,12.5422443463713,51.4850071550977,40.7227244375075,54.8493149069337,0.219259876645935,0,109.760653549815,205.337168208016,164.316089305473,15.8683157937492,0,0.082509499920588,29.2875424378048,34.4531930399356,281.196877227279,8.7970353645831,11.0915004322544,10.5917535561029,6.61615547925747,1.18162269355101,6.52575122614028,16.7044189735558,7.47869099432594,6.11554186835619,10.3782636377157,6.12541019974004,4.34978457678865,178.03584538086,846.530400627591,331.092703326285,20.0221827114458,20.2276291520468,351.452928798329,70.9791759168014,5.43874569619567,19.3522352067027,3.48017367190598,24.4006648222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| ||
|short_description=p1@SFRP1 | |short_description=p1@SFRP1 | ||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p1@SFRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFRP1_5end |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | 0bp_to_ENST00000535263, NM_003012, uc003xnt.2_5end |
EntrezGene: | SFRP1 |
HGNC: | 10776 |
UniProt: | Q8N474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.53e-12 | 76 |
electrically responsive cell | 2.50e-10 | 61 |
electrically active cell | 2.50e-10 | 61 |
smooth muscle cell | 7.70e-10 | 43 |
smooth muscle myoblast | 7.70e-10 | 43 |
muscle cell | 2.03e-08 | 55 |
muscle precursor cell | 3.69e-08 | 58 |
myoblast | 3.69e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.69e-08 | 58 |
vascular associated smooth muscle cell | 9.23e-07 | 32 |