FFCP PHASE1:Hg19::chr11:47788928..47788939,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23360 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19752 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXL1,B3KNP0,Q8N3X1 | |||
|association_with_transcript=53bp_to_ENST00000540172,NM_015308,uc001ngl.2,uc009ylv.2_5end | |||
|cluster_id=chr11:47788928..47788939,- | |||
|description=CAGE_peak_4_at_FNBP4_5end | |||
|id=chr11:47788928..47788939,- | |||
|ontology_enrichment_celltype=CL:0000037!5.07e-18!172;CL:0000566!5.07e-18!172;CL:0000988!1.90e-17!182;CL:0000738!3.49e-16!140;CL:0000542!2.26e-15!53;CL:0000051!2.26e-15!53;CL:0000838!2.68e-15!52;CL:0002032!3.64e-15!165;CL:0000837!3.64e-15!165;CL:0002031!9.51e-14!124;CL:0002087!3.42e-13!119;CL:0000084!5.71e-08!25;CL:0000827!5.71e-08!25;CL:0000945!4.24e-07!24;CL:0000826!4.24e-07!24;CL:0000791!8.10e-07!18;CL:0000789!8.10e-07!18;CL:0002420!8.10e-07!18;CL:0002419!8.10e-07!18;CL:0000790!8.10e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.43e-09;53!CL:0000084;1.77e-07;25!CL:0000945;4.80e-07;24!CL:0000624;6.61e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.05e-19,168;CL:0000738,1.43e-18,136;CL:0000988,1.26e-17,177;CL:0000838,4.02e-16,52;CL:0000542,1.47e-15,53;CL:0000051,1.47e-15,53;CL:0002032,1.77e-15,161;CL:0000837,1.77e-15,161;CL:0002031,2.47e-15,120;CL:0002087,5.99e-14,115;CL:0000084,9.90e-08,25;CL:0000827,9.90e-08,25;CL:0000945,1.46e-07,24;CL:0000826,1.46e-07,24;CL:0000624,4.01e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.43e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-12!94;UBERON:0001016!1.98e-12!94;UBERON:0001017!3.80e-12!82;UBERON:0001049!1.49e-11!57;UBERON:0005068!1.49e-11!57;UBERON:0006241!1.49e-11!57;UBERON:0007135!1.49e-11!57;UBERON:0005743!1.80e-11!86;UBERON:0000955!4.54e-11!69;UBERON:0006238!4.54e-11!69;UBERON:0001869!6.96e-11!32;UBERON:0002780!8.55e-11!41;UBERON:0001890!8.55e-11!41;UBERON:0006240!8.55e-11!41;UBERON:0002616!2.00e-10!59;UBERON:0001893!2.97e-10!34;UBERON:0003080!5.45e-10!42;UBERON:0002791!5.76e-10!33;UBERON:0002020!1.20e-09!34;UBERON:0003528!1.20e-09!34;UBERON:0002619!1.80e-09!22;UBERON:0000956!1.18e-08!25;UBERON:0000203!1.18e-08!25;UBERON:0001950!1.22e-08!20;UBERON:0007023!7.26e-08!115;UBERON:0002346!1.59e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.97e-10;22!UBERON:0001869;1.01e-09;32!UBERON:0002780;2.43e-09;41!UBERON:0001890;2.43e-09;41!UBERON:0001950;2.92e-09;20!UBERON:0002791;3.66e-09;32!UBERON:0001893;4.21e-09;34!UBERON:0000956;1.71e-08;25!UBERON:0000203;1.71e-08;25!UBERON:0003528;3.63e-08;34!UBERON:0002020;3.63e-08;34!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.49e-13,53;UBERON:0002616,6.49e-13,53;UBERON:0002780,1.04e-12,41;UBERON:0001890,1.04e-12,41;UBERON:0003080,1.04e-12,41;UBERON:0006240,1.04e-12,41;UBERON:0001049,2.58e-12,56;UBERON:0005068,2.58e-12,56;UBERON:0006241,2.58e-12,56;UBERON:0007135,2.58e-12,56;UBERON:0001016,8.85e-12,89;UBERON:0001869,9.84e-12,32;UBERON:0001017,1.98e-11,81;UBERON:0001893,2.47e-11,34;UBERON:0000955,3.78e-11,68;UBERON:0006238,3.78e-11,68;UBERON:0002619,5.51e-11,22;UBERON:0002791,1.04e-10,32;UBERON:0001950,9.36e-10,20;UBERON:0003528,1.25e-09,34;UBERON:0002020,1.25e-09,34;UBERON:0000956,5.83e-09,25;UBERON:0000203,5.83e-09,25;UBERON:0002346,8.05e-09,86;UBERON:0003075,2.32e-07,82;UBERON:0007284,2.32e-07,82;UBERON:0007023,3.25e-07,114;UBERON:0003056,4.29e-07,61 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0.37129905888014,0,0,0,0,0.487932798790507,0.369363174230364,0.612002073732759,0.626909442956176,0.286235987131057,0.958120975510189,0.627713197974014,1.60468152070698,1.39571002064908,1.49550484495991,1.57345710739562,1.15148819429164,2.16742572642506,0,0,0,1.62681121218633,1.27952309238679,1.46800219667424,4.9859586767869,4.41197784434312,3.25516306073778,0.447830948479849,1.29557466407592,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,0,1.7261543539329,1.7931249457037,1.6553756092201,5.86067657252252,4.51839278508678,5.41705946377367,1.12945403725563,1.09162460023138,1.12361742222542,2.14258724659632,3.53021929783703,3.83602275479425,0.329851300186716,0.398927315243264,0,0,2.8369261234557,1.24564449799115,0.75374599577023,1.0429658368404,0.65156653411535,2.42159801053347,3.68277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0.628975936525128,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,2.18455444504853,2.66852776159066,1.28019066769952,2.00197993518006,1.72425731986345,1.98313461835459,0.954053754535364,6.83055562931338,5.87237189370939,8.41001101875504,1.32171328579026,2.80254281490768,0.526768169550154,11.0157471263747,8.64623678048162,6.37364646898479,0.334372990781356,4.88883399950386,3.78758244587787,0,0.445641827540694,1.76763544484902,2.65840673500345,1.89562704635511,0.768547918354051,1.04047478047903,0.986627427622057,1.38175008892924,0.869409257205157,4.89345658434799,6.95606153033254,7.31748666634838,1.0197840842781,4.21542542962113,4.12352934579156,4.04831507231205,2.22995790026868,0.651083453856419,0.950452044448374,0.752875595388864,0.639933055772092,1.24930726552346,1.89421801635213,0.821127996921047,7.05623601286563,7.2208852861547,6.95157138637435,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,1.45990461090791,0.567208902984407,1.10864698731282,0.614843499851882,1.17881167947941,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.531831842075461,8.58566247499231,6.29194401858141,9.28643753323912,0.596287222100115,0,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,1.25396979922086,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,1.07159673940896,1.12264686313085,1.12611480483322,0,0.949265659568129,1.28241220751285,0,3.87780264148325,0,0,0.759783069987479,1.05927344650575,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0,0,0.538842688278752,0.817309515567294,0.151357427644931,1.72852777344,0.937285727335186,0,0.570471821544449,0,0.587172493218824,0.647491777472526,0.702254033511242,0.61246251376468,0.245668634623536,0.619954687054593,1.18800285728205,1.48360157567134,0,0.718618141816238,0.336672227908132,0.875829639103749,0.554128230968366,1.31693286264251,0.30648779579902,1.05166641234618,0.113432183160021,1.25572744982203,0.427114777637135,0.423863802319124,0.900273288253207,0.309157587715317,1.54584324027377,0.37223371266318,2.19409231913646,0.584622030967192,1.51460264546469,0.368199594569197,0.323292113637624,1.42003837006646,0.201504196455281,0.339121184620975,0.193260853163297,0,0.860413786167011,0.731842236777572,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,0.36497735907583,0,0,2.76269842704961,0,0,0,0.505754070234305,0.482022059766964,0.220587945464788,0.653638332277218,0.474541238222193,0.269662616320329,0.784885860501384,0.769494313892781,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,4.41463099414651,0.368965315629341,0.857839051492628,0,0,0.402115889646523,0.370353780634118,0,0,0,0.34779121492523,0.234817388471643,0.288732895522148,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.716468181622786,0,0,4.92663237895944,0.264145302039678,2.07328115540772,1.00883967391873,1.38866676769018,0.253991577168676,0,0,1.71072446022705,0,0.600686115687835,0.285826432630578,0.336393253036082,0.87192013766656,0.51336800074665,0.129271715757778,3.57656445851882,0,1.59562869950922,0,0.771622122786426,0,0,0.142977993658148,0.542621605391443,1.64648067356154,0.977208552881205,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0.718874566474748,0,1.42636905040718,0.289562613335158,0.205476322550383,0.895304816199478,0.448340575974109,2.75843064282698,5.39068937148793,4.36366323351144,0.508189248444927,2.60279707715243,3.09315525111078,1.84267891867784,1.27587750330633,0,2.99161459204025,0.828831026872071,0.24538298343828,0,0,1.03985430765404,1.24900292158013,0.946214490203608,0.585707074963566,0.300946099727719,0,0,0,0.737476674166813,0.173767228936166,0.587403472388222,0.686286847621712,3.72182447021197,4.52999821719095,2.24127871387233,0.606255142892519,0,0,0.24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| |||
|short_description=p4@FNBP4 | |||
}} |
Latest revision as of 06:25, 18 September 2015
Short description: | p4@FNBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FNBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000540172, NM_015308, uc001ngl.2, uc009ylv.2_5end |
EntrezGene: | FNBP4 |
HGNC: | 19752 |
UniProt: | F5GXL1B3KNP0Q8N3X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.05e-19 | 168 |
leukocyte | 1.43e-18 | 136 |
hematopoietic cell | 1.26e-17 | 177 |
lymphoid lineage restricted progenitor cell | 4.02e-16 | 52 |
lymphocyte | 1.47e-15 | 53 |
common lymphoid progenitor | 1.47e-15 | 53 |
hematopoietic oligopotent progenitor cell | 1.77e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.47e-15 | 120 |
nongranular leukocyte | 5.99e-14 | 115 |
T cell | 9.90e-08 | 25 |
pro-T cell | 9.90e-08 | 25 |
lymphocyte of B lineage | 1.46e-07 | 24 |
pro-B cell | 1.46e-07 | 24 |
CD4-positive, alpha-beta T cell | 4.01e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.49e-13 | 53 |
regional part of brain | 6.49e-13 | 53 |
regional part of forebrain | 1.04e-12 | 41 |
forebrain | 1.04e-12 | 41 |
anterior neural tube | 1.04e-12 | 41 |
future forebrain | 1.04e-12 | 41 |
neural tube | 2.58e-12 | 56 |
neural rod | 2.58e-12 | 56 |
future spinal cord | 2.58e-12 | 56 |
neural keel | 2.58e-12 | 56 |
nervous system | 8.85e-12 | 89 |
cerebral hemisphere | 9.84e-12 | 32 |
central nervous system | 1.98e-11 | 81 |
telencephalon | 2.47e-11 | 34 |
brain | 3.78e-11 | 68 |
future brain | 3.78e-11 | 68 |
regional part of cerebral cortex | 5.51e-11 | 22 |
regional part of telencephalon | 1.04e-10 | 32 |
neocortex | 9.36e-10 | 20 |
brain grey matter | 1.25e-09 | 34 |
gray matter | 1.25e-09 | 34 |
cerebral cortex | 5.83e-09 | 25 |
pallium | 5.83e-09 | 25 |
neurectoderm | 8.05e-09 | 86 |
neural plate | 2.32e-07 | 82 |
presumptive neural plate | 2.32e-07 | 82 |
adult organism | 3.25e-07 | 114 |
pre-chordal neural plate | 4.29e-07 | 61 |