FFCP PHASE1:Hg19::chr8:53162037..53162058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18695 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENST00000518545_5end | |||
|cluster_id=chr8:53162037..53162058,- | |||
|coexpression_cluster_id=C1478 | |||
|description=CAGE_peak_5_at_ST18_5end | |||
|id=chr8:53162037..53162058,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.32e-08;1!CL:0000167;6.97e-08;1!CL:0000164;6.97e-08;1!CL:0000502;6.97e-08;1!CL:0000172;6.97e-08;1!CL:0000173;6.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.32e-08,1;CL:0000167,7.45e-08,1;CL:0000164,7.45e-08,1;CL:0000502,7.45e-08,1;CL:0000172,7.45e-08,1;CL:0000173,7.45e-08,1;CL:0002351,7.45e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.69e-20;3!CL:0002351;6.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.14e-11;14!DOID:4430;6.97e-08;1!DOID:5409;1.29e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.21e-11,14;DOID:4430,7.45e-08,1;DOID:5409,1.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-47!82;UBERON:0005743!3.32e-47!86;UBERON:0001049!5.07e-46!57;UBERON:0005068!5.07e-46!57;UBERON:0006241!5.07e-46!57;UBERON:0007135!5.07e-46!57;UBERON:0000073!6.56e-44!94;UBERON:0001016!6.56e-44!94;UBERON:0000955!3.21e-36!69;UBERON:0006238!3.21e-36!69;UBERON:0002616!4.13e-36!59;UBERON:0003075!1.08e-35!86;UBERON:0007284!1.08e-35!86;UBERON:0002346!1.14e-33!90;UBERON:0002780!1.34e-28!41;UBERON:0001890!1.34e-28!41;UBERON:0006240!1.34e-28!41;UBERON:0003080!8.73e-28!42;UBERON:0003056!5.34e-23!61;UBERON:0004121!3.17e-22!169;UBERON:0000924!1.88e-21!173;UBERON:0006601!1.88e-21!173;UBERON:0003076!3.81e-20!15;UBERON:0003057!3.81e-20!15;UBERON:0000033!3.57e-19!123;UBERON:0002020!2.23e-18!34;UBERON:0003528!2.23e-18!34;UBERON:0007023!3.12e-18!115;UBERON:0001893!4.44e-18!34;UBERON:0000153!7.28e-18!129;UBERON:0007811!7.28e-18!129;UBERON:0001869!3.40e-17!32;UBERON:0002791!1.45e-16!33;UBERON:0001894!1.68e-14!7;UBERON:0006222!1.68e-14!7;UBERON:0004733!6.87e-14!12;UBERON:0002028!6.87e-14!12;UBERON:0007277!6.87e-14!12;UBERON:0002308!7.32e-14!9;UBERON:0000125!7.32e-14!9;UBERON:0004732!1.04e-12!13;UBERON:0003296!1.65e-12!4;UBERON:0010133!1.65e-12!4;UBERON:0000025!1.82e-11!194;UBERON:0000369!2.90e-11!4;UBERON:0002435!2.90e-11!4;UBERON:0000204!2.90e-11!4;UBERON:0010082!2.90e-11!4;UBERON:0002680!5.27e-11!9;UBERON:0001895!5.27e-11!9;UBERON:0010092!5.27e-11!9;UBERON:0002619!3.98e-10!22;UBERON:0009663!1.82e-09!7;UBERON:0005383!4.79e-09!3;UBERON:0005382!4.79e-09!3;UBERON:0000956!1.01e-08!25;UBERON:0000203!1.01e-08!25;UBERON:0000988!1.12e-08!3;UBERON:0000483!1.21e-08!309;UBERON:0002240!1.63e-08!3;UBERON:0000119!1.86e-08!312;UBERON:0002298!3.07e-08!8;UBERON:0004111!4.32e-08!241;UBERON:0001905!1.85e-07!2;UBERON:0002757!1.85e-07!2;UBERON:0010134!1.85e-07!2;UBERON:0002784!1.85e-07!2;UBERON:0005408!1.85e-07!2;UBERON:0001899!1.85e-07!2;UBERON:0002420!2.76e-07!9;UBERON:0007245!2.76e-07!9;UBERON:0010009!2.76e-07!9;UBERON:0010011!2.76e-07!9;UBERON:0000454!2.76e-07!9;UBERON:0001950!3.38e-07!20;UBERON:0000064!3.43e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.43e-15;4!UBERON:0010133;1.43e-15;4!UBERON:0001905;9.01e-15;2!UBERON:0002757;9.01e-15;2!UBERON:0010134;9.01e-15;2!UBERON:0005408;9.01e-15;2!UBERON:0001899;9.01e-15;2!UBERON:0002037;2.03e-10;6!UBERON:0000073;1.07e-09;53!UBERON:0002616;1.07e-09;53!UBERON:0002114;1.64e-09;2!UBERON:0001894;4.12e-09;7!UBERON:0004733;8.09e-09;12!UBERON:0002028;8.09e-09;12!UBERON:0004732;3.79e-08;13!UBERON:0000955;7.41e-08;68!UBERON:0002784;8.25e-08;4!UBERON:0002780;4.05e-07;41!UBERON:0001890;4.05e-07;41!UBERON:0002680;4.27e-07;9!UBERON:0001895;4.27e-07;9!UBERON:0000922;5.31e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.23e-15,4;UBERON:0010133,1.23e-15,4;UBERON:0000073,7.34e-15,53;UBERON:0002616,7.34e-15,53;UBERON:0001905,9.02e-15,2;UBERON:0002757,9.02e-15,2;UBERON:0010134,9.02e-15,2;UBERON:0005408,9.02e-15,2;UBERON:0001899,9.02e-15,2;UBERON:0001049,5.83e-14,56;UBERON:0005068,5.83e-14,56;UBERON:0006241,5.83e-14,56;UBERON:0007135,5.83e-14,56;UBERON:0000955,5.83e-13,68;UBERON:0006238,5.83e-13,68;UBERON:0001017,1.52e-10,81;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0002037,2.00e-10,6;UBERON:0006215,2.00e-10,6;UBERON:0002346,6.12e-10,86;UBERON:0002114,1.64e-09,2;UBERON:0001016,2.84e-09,89;UBERON:0010371,3.11e-09,104;UBERON:0001894,3.79e-09,7;UBERON:0006222,3.79e-09,7;UBERON:0004733,8.52e-09,12;UBERON:0002028,8.52e-09,12;UBERON:0007277,8.52e-09,12;UBERON:0002780,1.14e-08,41;UBERON:0001890,1.14e-08,41;UBERON:0003080,1.14e-08,41;UBERON:0006240,1.14e-08,41;UBERON:0004732,3.97e-08,13;UBERON:0002784,8.25e-08,4;UBERON:0002680,4.23e-07,9;UBERON:0001895,4.23e-07,9;UBERON:0010092,4.23e-07,9;UBERON:0003076,4.68e-07,15;UBERON:0003057,4.68e-07,15;UBERON:0003056,5.92e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2473917253473,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,3.79217710565611,1.45802306691627,2.08349993919951,0.885741385813839,0.60298219312704,7.62908681585416,13.0483526718845,5.6154047601174,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58726814966023,0,0,0,0,0,0,0,0,0,22.1357547241934,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44207766997908,0.18628920882415,0.830091809617385,0,0,0,0,0,9.56478788831446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,57.6410938765538,0,0,0.321146125482298,0,0.319267718114302,0,1.51243017733031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0,7.11067251723685,0,0,0,0,33.7492156603321,96.5134282768025,1.82089681270989,0.682986574053893,0,0,0,0.339848664884159,0,0,0,0,0.785577949580009,0,0,0,0,1.78691360441641,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.884854394279,58.0936263471195,0,0,13.6326240764332,15.0962843566674,0.0771741581079447,0.655678681511872,63.0225177124441,0,7.07029641304878,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,3.9271562130634,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ST18 | |||
}} |
Latest revision as of 11:20, 18 September 2015
Short description: | p5@ST18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST18_5end |
Coexpression cluster: | C1478_nonsmall_smallcell_small_pineal_cerebellum_argyrophil_gastrointestinal |
Association with transcript: | -65bp_to_ENST00000518545_5end |
EntrezGene: | ST18 |
HGNC: | 18695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.32e-08 | 1 |
peptide hormone secreting cell | 7.45e-08 | 1 |
enteroendocrine cell | 7.45e-08 | 1 |
type D enteroendocrine cell | 7.45e-08 | 1 |
somatostatin secreting cell | 7.45e-08 | 1 |
pancreatic D cell | 7.45e-08 | 1 |
progenitor cell of endocrine pancreas | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.21e-11 | 14 |
somatostatinoma | 7.45e-08 | 1 |
lung small cell carcinoma | 1.27e-07 | 4 |