FFCP PHASE1:Hg19::chr6:36973470..36973478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221472 | |EntrezGene=221472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3664 | |HGNC=3664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464083,ENST00000487975_5end | |association_with_transcript=0bp_to_ENST00000464083,ENST00000487975_5end | ||
|cluster_id=chr6:36973470..36973478,+ | |||
|coexpression_cluster_id=C813 | |coexpression_cluster_id=C813 | ||
|description=CAGE_peak_3_at_FGD2_5end | |description=CAGE_peak_3_at_FGD2_5end | ||
|id=chr6:36973470..36973478,+ | |id=chr6:36973470..36973478,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.00e-57!140;CL:0002087!8.72e-55!119;CL:0000037!1.43e-48!172;CL:0000566!1.43e-48!172;CL:0002031!3.65e-48!124;CL:0000988!6.24e-44!182;CL:0002032!8.01e-44!165;CL:0000837!8.01e-44!165;CL:0002009!1.08e-43!65;CL:0002194!1.23e-41!63;CL:0000576!1.23e-41!63;CL:0000040!1.23e-41!63;CL:0000559!1.23e-41!63;CL:0000557!5.82e-40!71;CL:0002057!2.50e-36!42;CL:0000766!3.72e-36!76;CL:0000839!1.73e-35!70;CL:0000860!7.25e-33!45;CL:0000763!6.26e-30!112;CL:0000049!6.26e-30!112;CL:0000945!1.99e-22!24;CL:0000826!1.99e-22!24;CL:0000236!1.39e-16!14;CL:0000451!3.26e-13!10;CL:0000542!3.34e-12!53;CL:0000051!3.34e-12!53;CL:0002393!6.68e-12!9;CL:0002397!6.68e-12!9;CL:0000838!1.63e-11!52;CL:0000990!6.54e-11!8;CL:0000840!2.80e-08!5;CL:0001029!2.80e-08!5;CL:0000134!5.69e-08!358;CL:0002320!2.42e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.00e-57!140;CL:0002087!8.72e-55!119;CL:0000037!1.43e-48!172;CL:0000566!1.43e-48!172;CL:0002031!3.65e-48!124;CL:0000988!6.24e-44!182;CL:0002032!8.01e-44!165;CL:0000837!8.01e-44!165;CL:0002009!1.08e-43!65;CL:0002194!1.23e-41!63;CL:0000576!1.23e-41!63;CL:0000040!1.23e-41!63;CL:0000559!1.23e-41!63;CL:0000557!5.82e-40!71;CL:0002057!2.50e-36!42;CL:0000766!3.72e-36!76;CL:0000839!1.73e-35!70;CL:0000860!7.25e-33!45;CL:0000763!6.26e-30!112;CL:0000049!6.26e-30!112;CL:0000945!1.99e-22!24;CL:0000826!1.99e-22!24;CL:0000236!1.39e-16!14;CL:0000451!3.26e-13!10;CL:0000542!3.34e-12!53;CL:0000051!3.34e-12!53;CL:0002393!6.68e-12!9;CL:0002397!6.68e-12!9;CL:0000838!1.63e-11!52;CL:0000990!6.54e-11!8;CL:0000840!2.80e-08!5;CL:0001029!2.80e-08!5;CL:0000134!5.69e-08!358;CL:0002320!2.42e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.36e-28;48!CL:0000945;1.35e-25;24!CL:0000860;2.05e-24;33!CL:0002057;2.05e-24;33!CL:0000473;3.54e-23;39!CL:0000234;3.54e-23;39!CL:0000451;4.88e-22;10!CL:0000236;7.86e-21;13!CL:0000766;9.49e-20;69!CL:0000990;5.82e-18;8!CL:0002087;2.29e-17;104!CL:0000738;5.50e-16;136!CL:0000840;2.28e-13;5!CL:0002393;2.77e-13;6!CL:0002397;2.77e-13;6!CL:0000763;1.06e-10;100!CL:0000453;8.56e-10;5!CL:0000988;1.84e-09;177!CL:0000875;3.34e-08;3!CL:0002396;3.34e-08;3!CL:0000784;7.28e-08;3!CL:0002619;2.45e-07;3!CL:0000219;3.02e-07;193!CL:0000767;4.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.61e-72,136;CL:0002087,7.19e-64,115;CL:0000037,1.09e-61,168;CL:0002009,1.68e-59,61;CL:0000988,1.62e-57,177;CL:0002031,2.49e-56,120;CL:0002194,4.92e-56,59;CL:0000576,4.92e-56,59;CL:0000040,4.92e-56,59;CL:0000559,4.92e-56,59;CL:0000557,1.75e-55,67;CL:0002032,2.23e-55,161;CL:0000837,2.23e-55,161;CL:0000766,4.95e-51,72;CL:0000839,8.97e-49,66;CL:0000473,4.93e-46,48;CL:0000234,4.93e-46,48;CL:0000763,1.08e-44,108;CL:0000049,1.08e-44,108;CL:0000860,2.22e-42,42;CL:0002057,2.22e-42,42;CL:0000945,8.37e-26,24;CL:0000826,8.37e-26,24;CL:0000236,1.83e-22,14;CL:0000451,4.04e-22,10;CL:0002393,8.40e-20,9;CL:0002397,8.40e-20,9;CL:0000134,2.33e-19,354;CL:0002320,1.37e-18,361;CL:0000990,4.72e-18,8;CL:0000219,6.74e-16,386;CL:0000840,2.06e-13,5;CL:0001029,2.06e-13,5;CL:0000048,1.24e-12,427;CL:0000034,3.26e-12,441;CL:0000723,3.49e-12,433;CL:0000542,4.60e-10,53;CL:0000051,4.60e-10,53;CL:0000453,7.34e-10,5;CL:0000838,3.56e-09,52;CL:0000875,3.47e-08,3;CL:0002396,3.47e-08,3;CL:0000784,7.47e-08,3;CL:0002619,2.18e-07,3;CL:0000767,4.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-31;42!CL:0000049;8.78e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.74e-48!102;UBERON:0003061!9.74e-48!102;UBERON:0002193!2.91e-44!112;UBERON:0002371!2.25e-34!80;UBERON:0001474!1.57e-30!86;UBERON:0007023!5.44e-28!115;UBERON:0002405!2.89e-27!115;UBERON:0004765!5.24e-24!101;UBERON:0001434!5.24e-24!101;UBERON:0003081!9.24e-14!216;UBERON:0000178!1.19e-09!15;UBERON:0000179!1.19e-09!15;UBERON:0000463!1.19e-09!15;UBERON:0002204!2.17e-09!167;UBERON:0000479!5.66e-08!787;UBERON:0002384!7.81e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!9.74e-48!102;UBERON:0003061!9.74e-48!102;UBERON:0002193!2.91e-44!112;UBERON:0002371!2.25e-34!80;UBERON:0001474!1.57e-30!86;UBERON:0007023!5.44e-28!115;UBERON:0002405!2.89e-27!115;UBERON:0004765!5.24e-24!101;UBERON:0001434!5.24e-24!101;UBERON:0003081!9.24e-14!216;UBERON:0000178!1.19e-09!15;UBERON:0000179!1.19e-09!15;UBERON:0000463!1.19e-09!15;UBERON:0002204!2.17e-09!167;UBERON:0000479!5.66e-08!787;UBERON:0002384!7.81e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-14;15!UBERON:0000179;1.64e-14;15!UBERON:0000463;1.64e-14;15!UBERON:0002390;1.41e-10;32!UBERON:0002193;1.60e-07;42!UBERON:0002106;2.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.48e-63,98;UBERON:0003061,3.48e-63,98;UBERON:0002193,2.06e-60,108;UBERON:0002371,2.43e-47,76;UBERON:0002405,1.34e-46,93;UBERON:0001474,6.70e-43,82;UBERON:0004765,6.68e-38,90;UBERON:0001434,8.82e-33,100;UBERON:0003081,5.52e-23,203;UBERON:0002384,1.51e-17,371;UBERON:0002204,1.71e-14,167;UBERON:0000178,2.42e-14,15;UBERON:0000179,2.42e-14,15;UBERON:0000463,2.42e-14,15;UBERON:0000926,8.49e-10,315;UBERON:0004120,8.49e-10,315;UBERON:0006603,8.49e-10,315;UBERON:0002106,2.71e-07,3;UBERON:0004854,2.71e-07,3;UBERON:0009034,2.71e-07,3;UBERON:0002095,2.71e-07,3;UBERON:0004782,2.71e-07,3;UBERON:0003281,2.71e-07,3;UBERON:0009664,2.71e-07,3;UBERON:0002296,2.71e-07,3;UBERON:0005602,2.71e-07,3;UBERON:0001179,2.71e-07,3;UBERON:0006293,2.71e-07,3 | |||
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|short_description=p3@FGD2 | |short_description=p3@FGD2 | ||
}} | }} |
Latest revision as of 14:07, 18 September 2015
Short description: | p3@FGD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGD2_5end |
Coexpression cluster: | C813_CD19_CD14CD16_CD14_Macrophage_Monocytederived_pancreatic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000464083, ENST00000487975_5end |
EntrezGene: | FGD2 |
HGNC: | 3664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.48e-63 | 98 |
blood island | 3.48e-63 | 98 |
hemolymphoid system | 2.06e-60 | 108 |
bone marrow | 2.43e-47 | 76 |
immune system | 1.34e-46 | 93 |
bone element | 6.70e-43 | 82 |
skeletal element | 6.68e-38 | 90 |
skeletal system | 8.82e-33 | 100 |
lateral plate mesoderm | 5.52e-23 | 203 |
connective tissue | 1.51e-17 | 371 |
musculoskeletal system | 1.71e-14 | 167 |
blood | 2.42e-14 | 15 |
haemolymphatic fluid | 2.42e-14 | 15 |
organism substance | 2.42e-14 | 15 |
mesoderm | 8.49e-10 | 315 |
mesoderm-derived structure | 8.49e-10 | 315 |
presumptive mesoderm | 8.49e-10 | 315 |
spleen | 2.71e-07 | 3 |
gastrointestinal system mesentery | 2.71e-07 | 3 |
stomach region | 2.71e-07 | 3 |
mesentery | 2.71e-07 | 3 |
gastrointestinal system serosa | 2.71e-07 | 3 |
mesentery of stomach | 2.71e-07 | 3 |
gut mesentery | 2.71e-07 | 3 |
dorsal mesentery | 2.71e-07 | 3 |
dorsal mesogastrium | 2.71e-07 | 3 |
peritoneal cavity | 2.71e-07 | 3 |
spleen primordium | 2.71e-07 | 3 |