FFCP PHASE1:Hg19::chr12:49393170..49393175,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23109 | |EntrezGene=23109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24458 | |HGNC=24458 | ||
|TSSclassifier=strong | |||
|UniProt=O94850 | |UniProt=O94850 | ||
|association_with_transcript=-78bp_to_ENST00000421952_5end | |association_with_transcript=-78bp_to_ENST00000421952_5end | ||
|cluster_id=chr12:49393170..49393175,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_DDN_5end | |description=CAGE_peak_5_at_DDN_5end | ||
|id=chr12:49393170..49393175,- | |id=chr12:49393170..49393175,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.35e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.52e-61!32;UBERON:0002619!1.43e-58!22;UBERON:0001893!1.54e-57!34;UBERON:0001950!4.90e-57!20;UBERON:0002791!1.38e-53!33;UBERON:0002020!6.38e-52!34;UBERON:0003528!6.38e-52!34;UBERON:0002780!7.15e-52!41;UBERON:0001890!7.15e-52!41;UBERON:0006240!7.15e-52!41;UBERON:0000956!2.35e-51!25;UBERON:0000203!2.35e-51!25;UBERON:0003080!1.52e-50!42;UBERON:0001049!3.91e-36!57;UBERON:0005068!3.91e-36!57;UBERON:0006241!3.91e-36!57;UBERON:0007135!3.91e-36!57;UBERON:0002616!9.32e-35!59;UBERON:0003056!1.81e-33!61;UBERON:0000955!1.42e-31!69;UBERON:0006238!1.42e-31!69;UBERON:0001871!2.25e-29!7;UBERON:0001017!1.79e-28!82;UBERON:0002346!4.21e-28!90;UBERON:0003075!3.57e-27!86;UBERON:0007284!3.57e-27!86;UBERON:0005743!6.35e-27!86;UBERON:0000073!6.60e-24!94;UBERON:0001016!6.60e-24!94;UBERON:0007023!4.02e-23!115;UBERON:0000033!1.35e-20!123;UBERON:0000200!1.76e-20!6;UBERON:0000153!2.22e-19!129;UBERON:0007811!2.22e-19!129;UBERON:0002021!2.68e-16!5;UBERON:0000349!3.02e-16!5;UBERON:0000924!1.44e-15!173;UBERON:0006601!1.44e-15!173;UBERON:0002771!3.87e-15!3;UBERON:0004121!9.89e-15!169;UBERON:0002420!1.70e-13!9;UBERON:0007245!1.70e-13!9;UBERON:0010009!1.70e-13!9;UBERON:0010011!1.70e-13!9;UBERON:0000454!1.70e-13!9;UBERON:0000369!1.58e-11!4;UBERON:0002435!1.58e-11!4;UBERON:0000204!1.58e-11!4;UBERON:0010082!1.58e-11!4;UBERON:0001876!4.96e-11!2;UBERON:0001872!1.68e-09!5;UBERON:0000025!4.75e-09!194;UBERON:0004111!8.45e-08!241;UBERON:0000064!2.17e-07!219;UBERON:0005383!2.83e-07!3;UBERON:0005382!2.83e-07!3;UBERON:0009663!9.05e-07!7 | |ontology_enrichment_uberon=UBERON:0001869!2.52e-61!32;UBERON:0002619!1.43e-58!22;UBERON:0001893!1.54e-57!34;UBERON:0001950!4.90e-57!20;UBERON:0002791!1.38e-53!33;UBERON:0002020!6.38e-52!34;UBERON:0003528!6.38e-52!34;UBERON:0002780!7.15e-52!41;UBERON:0001890!7.15e-52!41;UBERON:0006240!7.15e-52!41;UBERON:0000956!2.35e-51!25;UBERON:0000203!2.35e-51!25;UBERON:0003080!1.52e-50!42;UBERON:0001049!3.91e-36!57;UBERON:0005068!3.91e-36!57;UBERON:0006241!3.91e-36!57;UBERON:0007135!3.91e-36!57;UBERON:0002616!9.32e-35!59;UBERON:0003056!1.81e-33!61;UBERON:0000955!1.42e-31!69;UBERON:0006238!1.42e-31!69;UBERON:0001871!2.25e-29!7;UBERON:0001017!1.79e-28!82;UBERON:0002346!4.21e-28!90;UBERON:0003075!3.57e-27!86;UBERON:0007284!3.57e-27!86;UBERON:0005743!6.35e-27!86;UBERON:0000073!6.60e-24!94;UBERON:0001016!6.60e-24!94;UBERON:0007023!4.02e-23!115;UBERON:0000033!1.35e-20!123;UBERON:0000200!1.76e-20!6;UBERON:0000153!2.22e-19!129;UBERON:0007811!2.22e-19!129;UBERON:0002021!2.68e-16!5;UBERON:0000349!3.02e-16!5;UBERON:0000924!1.44e-15!173;UBERON:0006601!1.44e-15!173;UBERON:0002771!3.87e-15!3;UBERON:0004121!9.89e-15!169;UBERON:0002420!1.70e-13!9;UBERON:0007245!1.70e-13!9;UBERON:0010009!1.70e-13!9;UBERON:0010011!1.70e-13!9;UBERON:0000454!1.70e-13!9;UBERON:0000369!1.58e-11!4;UBERON:0002435!1.58e-11!4;UBERON:0000204!1.58e-11!4;UBERON:0010082!1.58e-11!4;UBERON:0001876!4.96e-11!2;UBERON:0001872!1.68e-09!5;UBERON:0000025!4.75e-09!194;UBERON:0004111!8.45e-08!241;UBERON:0000064!2.17e-07!219;UBERON:0005383!2.83e-07!3;UBERON:0005382!2.83e-07!3;UBERON:0009663!9.05e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.28e-37;20!UBERON:0002619;2.28e-34;22!UBERON:0000956;1.98e-30;25!UBERON:0000203;1.98e-30;25!UBERON:0002581;2.93e-23;1!UBERON:0002902;2.93e-23;1!UBERON:0002022;2.93e-23;1!UBERON:0009899;2.93e-23;1!UBERON:0001869;7.61e-22;32!UBERON:0002791;1.43e-20;32!UBERON:0001893;2.90e-20;34!UBERON:0002021;9.89e-19;5!UBERON:0003528;3.45e-18;34!UBERON:0002020;3.45e-18;34!UBERON:0002780;2.15e-14;41!UBERON:0001890;2.15e-14;41!UBERON:0002360;2.45e-12;2!UBERON:0000094;2.45e-12;2!UBERON:0010743;2.45e-12;2!UBERON:0001017;3.06e-10;75!UBERON:0001870;1.17e-08;3!UBERON:0000073;1.07e-07;53!UBERON:0002616;1.07e-07;53!UBERON:0000955;1.24e-07;68!UBERON:0001016;2.75e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.03e-37,20;UBERON:0002619,1.86e-34,22;UBERON:0000956,1.65e-30,25;UBERON:0000203,1.65e-30,25;UBERON:0002791,4.46e-24,32;UBERON:0001869,4.46e-24,32;UBERON:0002022,1.34e-23,1;UBERON:0002581,2.62e-23,1;UBERON:0002902,3.28e-23,1;UBERON:0009899,3.28e-23,1;UBERON:0003528,1.04e-22,34;UBERON:0002020,1.04e-22,34;UBERON:0001893,1.04e-22,34;UBERON:0002780,6.02e-19,41;UBERON:0001890,6.02e-19,41;UBERON:0003080,6.02e-19,41;UBERON:0006240,6.02e-19,41;UBERON:0002021,1.04e-18,5;UBERON:0001017,7.98e-17,81;UBERON:0000955,2.31e-15,68;UBERON:0006238,2.31e-15,68;UBERON:0001016,3.65e-15,89;UBERON:0000073,9.38e-15,53;UBERON:0002616,9.38e-15,53;UBERON:0001049,5.58e-14,56;UBERON:0005068,5.58e-14,56;UBERON:0006241,5.58e-14,56;UBERON:0007135,5.58e-14,56;UBERON:0003056,7.43e-13,61;UBERON:0002360,2.90e-12,2;UBERON:0000094,2.90e-12,2;UBERON:0010743,2.90e-12,2;UBERON:0007023,3.35e-12,114;UBERON:0003075,1.34e-09,82;UBERON:0007284,1.34e-09,82;UBERON:0002346,3.73e-09,86;UBERON:0001870,1.40e-08,3;UBERON:0004121,6.76e-08,171;UBERON:0000924,6.76e-08,171;UBERON:0006601,6.76e-08,171;UBERON:0010371,1.43e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0,0.341380344856499,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,1.45798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,0,0.319267718114302,2.66651273512982,0.252071696221718,1.24483054435592,0.161475645631851,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,1.24968269769413,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42782129400921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0,0.341380344856499,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,1.45798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,0,0.319267718114302,2.66651273512982,0.252071696221718,1.24483054435592,0.161475645631851,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,1.24968269769413,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42782129400921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@DDN | |short_description=p5@DDN | ||
}} | }} |
Latest revision as of 15:10, 18 September 2015
Short description: | p5@DDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DDN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -78bp_to_ENST00000421952_5end |
EntrezGene: | DDN |
HGNC: | 24458 |
UniProt: | O94850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data