FFCP PHASE1:Hg19::chr1:62784935..62784964,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:62784935..62784964,- to FFCP PHASE1:Hg19::chr1:62784935..62784964,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163782 | |EntrezGene=163782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27263 | |HGNC=27263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000354381_5end | |||
|cluster_id=chr1:62784935..62784964,- | |||
|coexpression_cluster_id=C3990 | |||
|description=CAGE_peak_3_at_KANK4_5end | |||
|id=chr1:62784935..62784964,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.45e-17;19!CL:0002541;1.81e-10;3!CL:0002577;2.18e-09;3!CL:0002536;2.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.39e-17,19;CL:0002541,1.73e-10,3;CL:0002577,2.36e-09,3;CL:0002536,1.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.43e-10;3!UBERON:0003057;5.43e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-20!115;UBERON:0001049!7.69e-16!57;UBERON:0005068!7.69e-16!57;UBERON:0006241!7.69e-16!57;UBERON:0007135!7.69e-16!57;UBERON:0004121!4.69e-15!169;UBERON:0000924!8.38e-15!173;UBERON:0006601!8.38e-15!173;UBERON:0005743!3.16e-13!86;UBERON:0000073!3.57e-13!94;UBERON:0001016!3.57e-13!94;UBERON:0005631!5.61e-13!14;UBERON:0000158!5.61e-13!14;UBERON:0001017!8.85e-13!82;UBERON:0003075!7.18e-12!86;UBERON:0007284!7.18e-12!86;UBERON:0002346!1.90e-11!90;UBERON:0000955!2.36e-11!69;UBERON:0006238!2.36e-11!69;UBERON:0002616!2.37e-11!59;UBERON:0000153!4.63e-11!129;UBERON:0007811!4.63e-11!129;UBERON:0002298!7.25e-11!8;UBERON:0000033!7.01e-10!123;UBERON:0003124!9.27e-10!7;UBERON:0003076!4.39e-09!15;UBERON:0003057!4.39e-09!15;UBERON:0003080!5.19e-09!42;UBERON:0002780!2.64e-08!41;UBERON:0001890!2.64e-08!41;UBERON:0006240!2.64e-08!41;UBERON:0000478!3.02e-07!24;UBERON:0004732!4.64e-07!13;UBERON:0000475!7.28e-07!365;UBERON:0002020!9.24e-07!34;UBERON:0003528!9.24e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-19;10!UBERON:0000158;2.41e-19;10!UBERON:0000478;8.84e-19;24!UBERON:0002298;1.34e-17;6!UBERON:0001987;9.89e-12;4!UBERON:0000305;3.43e-11;7!UBERON:0004732;1.43e-10;13!UBERON:0003124;1.81e-10;3!UBERON:0000920;1.81e-10;3!UBERON:0002240;5.43e-10;3!UBERON:0005174;5.43e-10;3!UBERON:0001137;5.43e-10;3!UBERON:0000988;6.31e-10;3!UBERON:0001896;2.18e-09;3!UBERON:0005290;2.18e-09;3!UBERON:0004733;1.97e-08;12!UBERON:0002028;1.97e-08;12!UBERON:0005162;1.89e-07;2!UBERON:0000122;1.89e-07;2!UBERON:0002148;3.76e-07;2!UBERON:0006331;3.76e-07;2!UBERON:0009662;3.76e-07;2!UBERON:0002784;5.00e-07;4!UBERON:0001897;6.96e-07;2!UBERON:0010225;6.96e-07;2!UBERON:0001829;7.17e-07;2!UBERON:0001041;7.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.27e-29,14;UBERON:0000158,2.27e-29,14;UBERON:0003124,1.41e-20,7;UBERON:0000478,6.96e-19,24;UBERON:0002298,8.65e-18,6;UBERON:0003076,5.78e-15,15;UBERON:0003057,5.78e-15,15;UBERON:0001987,7.78e-12,4;UBERON:0004340,7.78e-12,4;UBERON:0000305,3.16e-11,7;UBERON:0004732,1.14e-10,13;UBERON:0000920,1.73e-10,3;UBERON:0002240,4.09e-10,3;UBERON:0005174,4.09e-10,3;UBERON:0001137,4.09e-10,3;UBERON:0000988,5.20e-10,3;UBERON:0004871,9.08e-10,8;UBERON:0001896,1.71e-09,3;UBERON:0005290,1.71e-09,3;UBERON:0010096,1.71e-09,3;UBERON:0001049,1.76e-09,56;UBERON:0005068,1.76e-09,56;UBERON:0006241,1.76e-09,56;UBERON:0007135,1.76e-09,56;UBERON:0004733,1.61e-08,12;UBERON:0002028,1.61e-08,12;UBERON:0007277,1.61e-08,12;UBERON:0004121,1.28e-07,171;UBERON:0000924,1.28e-07,171;UBERON:0006601,1.28e-07,171;UBERON:0005162,2.21e-07,2;UBERON:0000122,2.21e-07,2;UBERON:0002148,3.19e-07,2;UBERON:0006331,3.19e-07,2;UBERON:0009662,3.19e-07,2;UBERON:0003075,3.38e-07,82;UBERON:0007284,3.38e-07,82;UBERON:0002784,4.31e-07,4;UBERON:0010371,4.90e-07,104;UBERON:0001897,6.01e-07,2;UBERON:0010225,6.01e-07,2;UBERON:0007023,6.43e-07,114;UBERON:0004923,7.72e-07,66;UBERON:0001829,8.57e-07,2 | |||
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| ||
|short_description=p3@KANK4 | |||
}} | }} |
Latest revision as of 19:51, 18 September 2015
Short description: | p3@KANK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KANK4_5end |
Coexpression cluster: | C3990_Wilms_choriocarcinoma_chorionic_mature_Amniotic_amniotic_optic |
Association with transcript: | 7bp_to_ENST00000354381_5end |
EntrezGene: | KANK4 |
HGNC: | 27263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.39e-17 | 19 |
chorionic membrane mesenchymal stem cell | 1.73e-10 | 3 |
placental epithelial cell | 2.36e-09 | 3 |
amniotic epithelial cell | 1.83e-07 | 2 |