FFCP PHASE1:Hg19::chr3:52443988..52444054,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8314 | |EntrezGene=8314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=950 | |HGNC=950 | ||
|TSSclassifier=strong | |||
|UniProt=Q92560 | |UniProt=Q92560 | ||
|association_with_transcript=0bp_to_NM_004656,uc003ddx.2_5end | |association_with_transcript=0bp_to_NM_004656,uc003ddx.2_5end | ||
|cluster_id=chr3:52443988..52444054,- | |||
|description=CAGE_peak_1_at_BAP1_5end | |description=CAGE_peak_1_at_BAP1_5end | ||
|id=chr3:52443988..52444054,- | |id=chr3:52443988..52444054,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.45e-11!32;UBERON:0001893!2.38e-10!34;UBERON:0002619!3.41e-10!22;UBERON:0002791!8.75e-10!33;UBERON:0003056!1.10e-09!61;UBERON:0000956!1.17e-09!25;UBERON:0000203!1.17e-09!25;UBERON:0004121!1.95e-09!169;UBERON:0002020!2.47e-09!34;UBERON:0003528!2.47e-09!34;UBERON:0000924!2.79e-09!173;UBERON:0006601!2.79e-09!173;UBERON:0001950!3.35e-09!20;UBERON:0000955!6.70e-09!69;UBERON:0006238!6.70e-09!69;UBERON:0000119!9.30e-09!312;UBERON:0000483!2.94e-08!309;UBERON:0005743!2.97e-08!86;UBERON:0000033!3.01e-08!123;UBERON:0003075!5.26e-08!86;UBERON:0007284!5.26e-08!86;UBERON:0002616!5.52e-08!59;UBERON:0002780!8.75e-08!41;UBERON:0001890!8.75e-08!41;UBERON:0006240!8.75e-08!41;UBERON:0002346!9.90e-08!90;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0000064!1.46e-07!219;UBERON:0000479!2.13e-07!787;UBERON:0003080!2.70e-07!42;UBERON:0001017!2.77e-07!82;UBERON:0001049!3.40e-07!57;UBERON:0005068!3.40e-07!57;UBERON:0006241!3.40e-07!57;UBERON:0007135!3.40e-07!57 | |ontology_enrichment_uberon=UBERON:0001869!5.45e-11!32;UBERON:0001893!2.38e-10!34;UBERON:0002619!3.41e-10!22;UBERON:0002791!8.75e-10!33;UBERON:0003056!1.10e-09!61;UBERON:0000956!1.17e-09!25;UBERON:0000203!1.17e-09!25;UBERON:0004121!1.95e-09!169;UBERON:0002020!2.47e-09!34;UBERON:0003528!2.47e-09!34;UBERON:0000924!2.79e-09!173;UBERON:0006601!2.79e-09!173;UBERON:0001950!3.35e-09!20;UBERON:0000955!6.70e-09!69;UBERON:0006238!6.70e-09!69;UBERON:0000119!9.30e-09!312;UBERON:0000483!2.94e-08!309;UBERON:0005743!2.97e-08!86;UBERON:0000033!3.01e-08!123;UBERON:0003075!5.26e-08!86;UBERON:0007284!5.26e-08!86;UBERON:0002616!5.52e-08!59;UBERON:0002780!8.75e-08!41;UBERON:0001890!8.75e-08!41;UBERON:0006240!8.75e-08!41;UBERON:0002346!9.90e-08!90;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0000064!1.46e-07!219;UBERON:0000479!2.13e-07!787;UBERON:0003080!2.70e-07!42;UBERON:0001017!2.77e-07!82;UBERON:0001049!3.40e-07!57;UBERON:0005068!3.40e-07!57;UBERON:0006241!3.40e-07!57;UBERON:0007135!3.40e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.21e-10;22!UBERON:0001869;6.08e-10;32!UBERON:0000956;1.04e-09;25!UBERON:0000203;1.04e-09;25!UBERON:0001893;1.52e-09;34!UBERON:0001950;3.23e-09;20!UBERON:0002791;6.29e-09;32!UBERON:0003528;1.50e-08;34!UBERON:0002020;1.50e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.45e-11,104;UBERON:0001869,5.45e-11,32;UBERON:0001893,2.38e-10,34;UBERON:0002619,3.41e-10,22;UBERON:0003056,3.60e-10,61;UBERON:0004121,5.64e-10,171;UBERON:0000924,5.64e-10,171;UBERON:0006601,5.64e-10,171;UBERON:0000956,1.17e-09,25;UBERON:0000203,1.17e-09,25;UBERON:0002791,1.26e-09,32;UBERON:0003528,2.47e-09,34;UBERON:0002020,2.47e-09,34;UBERON:0000955,2.59e-09,68;UBERON:0006238,2.59e-09,68;UBERON:0001950,3.35e-09,20;UBERON:0000119,6.46e-09,309;UBERON:0000073,1.23e-08,53;UBERON:0002616,1.23e-08,53;UBERON:0000483,2.07e-08,306;UBERON:0003075,2.53e-08,82;UBERON:0007284,2.53e-08,82;UBERON:0002346,5.07e-08,86;UBERON:0002780,8.75e-08,41;UBERON:0001890,8.75e-08,41;UBERON:0003080,8.75e-08,41;UBERON:0006240,8.75e-08,41;UBERON:0001017,1.32e-07,81;UBERON:0001049,1.35e-07,56;UBERON:0005068,1.35e-07,56;UBERON:0006241,1.35e-07,56;UBERON:0007135,1.35e-07,56;UBERON:0001016,5.77e-07,89 | |||
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| ||
|short_description=p1@BAP1 | |short_description=p1@BAP1 | ||
}} | }} |
Latest revision as of 23:39, 18 September 2015
Short description: | p1@BAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004656, uc003ddx.2_5end |
EntrezGene: | BAP1 |
HGNC: | 950 |
UniProt: | Q92560 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.45e-11 | 104 |
cerebral hemisphere | 5.45e-11 | 32 |
telencephalon | 2.38e-10 | 34 |
regional part of cerebral cortex | 3.41e-10 | 22 |
pre-chordal neural plate | 3.60e-10 | 61 |
ectoderm-derived structure | 5.64e-10 | 171 |
ectoderm | 5.64e-10 | 171 |
presumptive ectoderm | 5.64e-10 | 171 |
cerebral cortex | 1.17e-09 | 25 |
pallium | 1.17e-09 | 25 |
regional part of telencephalon | 1.26e-09 | 32 |
brain grey matter | 2.47e-09 | 34 |
gray matter | 2.47e-09 | 34 |
brain | 2.59e-09 | 68 |
future brain | 2.59e-09 | 68 |
neocortex | 3.35e-09 | 20 |
cell layer | 6.46e-09 | 309 |
regional part of nervous system | 1.23e-08 | 53 |
regional part of brain | 1.23e-08 | 53 |
epithelium | 2.07e-08 | 306 |
neural plate | 2.53e-08 | 82 |
presumptive neural plate | 2.53e-08 | 82 |
neurectoderm | 5.07e-08 | 86 |
regional part of forebrain | 8.75e-08 | 41 |
forebrain | 8.75e-08 | 41 |
anterior neural tube | 8.75e-08 | 41 |
future forebrain | 8.75e-08 | 41 |
central nervous system | 1.32e-07 | 81 |
neural tube | 1.35e-07 | 56 |
neural rod | 1.35e-07 | 56 |
future spinal cord | 1.35e-07 | 56 |
neural keel | 1.35e-07 | 56 |
nervous system | 5.77e-07 | 89 |