FFCP PHASE1:Hg19::chr1:67390474..67390548,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:67390474..67390548,- to FFCP PHASE1:Hg19::chr1:67390474..67390548,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79819 | |EntrezGene=79819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26252 | |HGNC=26252 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAD8 | |UniProt=Q5TAD8 | ||
|association_with_transcript=0bp_to_ENST00000371022,ENST00000371023,ENST00000531980,ENST00000532629_5end | |||
|cluster_id=chr1:67390474..67390548,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_WDR78_5end | |||
|id=chr1:67390474..67390548,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-14!115;UBERON:0001049!1.31e-12!57;UBERON:0005068!1.31e-12!57;UBERON:0006241!1.31e-12!57;UBERON:0007135!1.31e-12!57;UBERON:0000153!4.18e-11!129;UBERON:0007811!4.18e-11!129;UBERON:0002616!5.35e-11!59;UBERON:0000955!8.10e-11!69;UBERON:0006238!8.10e-11!69;UBERON:0000073!1.10e-10!94;UBERON:0001016!1.10e-10!94;UBERON:0003080!1.41e-10!42;UBERON:0002780!1.43e-10!41;UBERON:0001890!1.43e-10!41;UBERON:0006240!1.43e-10!41;UBERON:0003075!2.02e-10!86;UBERON:0007284!2.02e-10!86;UBERON:0000033!3.24e-10!123;UBERON:0005743!3.25e-10!86;UBERON:0001017!3.25e-10!82;UBERON:0004121!5.94e-10!169;UBERON:0002346!6.72e-10!90;UBERON:0000924!1.13e-09!173;UBERON:0006601!1.13e-09!173;UBERON:0000475!2.57e-08!365;UBERON:0002020!4.06e-08!34;UBERON:0003528!4.06e-08!34;UBERON:0001893!1.09e-07!34;UBERON:0002791!1.45e-07!33;UBERON:0003056!2.47e-07!61;UBERON:0001869!5.11e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.15e-08;41!UBERON:0001890;3.15e-08;41!UBERON:0000073;1.07e-07;53!UBERON:0002616;1.07e-07;53!UBERON:0003528;4.49e-07;34!UBERON:0002020;4.49e-07;34!UBERON:0001893;5.96e-07;34!UBERON:0002791;9.16e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.24e-14,114;UBERON:0001049,1.17e-12,56;UBERON:0005068,1.17e-12,56;UBERON:0006241,1.17e-12,56;UBERON:0007135,1.17e-12,56;UBERON:0000073,1.47e-11,53;UBERON:0002616,1.47e-11,53;UBERON:0000955,7.88e-11,68;UBERON:0006238,7.88e-11,68;UBERON:0002780,9.43e-11,41;UBERON:0001890,9.43e-11,41;UBERON:0003080,9.43e-11,41;UBERON:0006240,9.43e-11,41;UBERON:0001016,1.16e-10,89;UBERON:0001017,3.77e-10,81;UBERON:0003075,3.95e-10,82;UBERON:0007284,3.95e-10,82;UBERON:0010314,5.12e-10,132;UBERON:0004121,1.19e-09,171;UBERON:0000924,1.19e-09,171;UBERON:0006601,1.19e-09,171;UBERON:0002346,1.34e-09,86;UBERON:0010371,2.76e-09,104;UBERON:0003528,2.83e-08,34;UBERON:0002020,2.83e-08,34;UBERON:0003056,6.27e-08,61;UBERON:0001893,7.70e-08,34;UBERON:0002791,2.66e-07,32;UBERON:0001869,3.68e-07,32 | |||
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| ||
|short_description=p1@WDR78 | |||
}} | }} |
Latest revision as of 01:18, 19 September 2015
Short description: | p1@WDR78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR78_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000371022, ENST00000371023, ENST00000531980, ENST00000532629_5end |
EntrezGene: | WDR78 |
HGNC: | 26252 |
UniProt: | Q5TAD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.24e-14 | 114 |
neural tube | 1.17e-12 | 56 |
neural rod | 1.17e-12 | 56 |
future spinal cord | 1.17e-12 | 56 |
neural keel | 1.17e-12 | 56 |
regional part of nervous system | 1.47e-11 | 53 |
regional part of brain | 1.47e-11 | 53 |
brain | 7.88e-11 | 68 |
future brain | 7.88e-11 | 68 |
regional part of forebrain | 9.43e-11 | 41 |
forebrain | 9.43e-11 | 41 |
anterior neural tube | 9.43e-11 | 41 |
future forebrain | 9.43e-11 | 41 |
nervous system | 1.16e-10 | 89 |
central nervous system | 3.77e-10 | 81 |
neural plate | 3.95e-10 | 82 |
presumptive neural plate | 3.95e-10 | 82 |
structure with developmental contribution from neural crest | 5.12e-10 | 132 |
ectoderm-derived structure | 1.19e-09 | 171 |
ectoderm | 1.19e-09 | 171 |
presumptive ectoderm | 1.19e-09 | 171 |
neurectoderm | 1.34e-09 | 86 |
ecto-epithelium | 2.76e-09 | 104 |
brain grey matter | 2.83e-08 | 34 |
gray matter | 2.83e-08 | 34 |
pre-chordal neural plate | 6.27e-08 | 61 |
telencephalon | 7.70e-08 | 34 |
regional part of telencephalon | 2.66e-07 | 32 |
cerebral hemisphere | 3.68e-07 | 32 |