FFCP PHASE1:Hg19::chr1:6845562..6845571,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:6845562..6845571,+
|short_description=p3@CAMTA1
|description=CAGE_peak_3_at_CAMTA1_5end
|association_with_transcript=-6bp_to_ENST00000467404_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23261 | |EntrezGene=23261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18806 | |HGNC=18806 | ||
|TSSclassifier=strong | |||
|UniProt=G3V297 | |UniProt=G3V297 | ||
|association_with_transcript=-6bp_to_ENST00000467404_5end | |||
|cluster_id=chr1:6845562..6845571,+ | |||
|description=CAGE_peak_3_at_CAMTA1_5end | |||
|id=chr1:6845562..6845571,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-14!57;UBERON:0005068!1.55e-14!57;UBERON:0006241!1.55e-14!57;UBERON:0007135!1.55e-14!57;UBERON:0002616!1.32e-13!59;UBERON:0001893!1.81e-13!34;UBERON:0001017!2.47e-13!82;UBERON:0002020!3.43e-13!34;UBERON:0003528!3.43e-13!34;UBERON:0005743!3.83e-13!86;UBERON:0002791!5.67e-13!33;UBERON:0001869!7.08e-13!32;UBERON:0002780!2.25e-12!41;UBERON:0001890!2.25e-12!41;UBERON:0006240!2.25e-12!41;UBERON:0000955!9.25e-12!69;UBERON:0006238!9.25e-12!69;UBERON:0000073!1.10e-11!94;UBERON:0001016!1.10e-11!94;UBERON:0003080!2.04e-11!42;UBERON:0003075!1.34e-10!86;UBERON:0007284!1.34e-10!86;UBERON:0000956!1.00e-09!25;UBERON:0000203!1.00e-09!25;UBERON:0003056!1.54e-09!61;UBERON:0002619!3.88e-09!22;UBERON:0002346!6.75e-09!90;UBERON:0001950!1.95e-08!20;UBERON:0000153!3.83e-07!129;UBERON:0007811!3.83e-07!129;UBERON:0000033!4.01e-07!123;UBERON:0007023!4.24e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.48e-12;34!UBERON:0001869;2.73e-12;32!UBERON:0003528;5.33e-12;34!UBERON:0002020;5.33e-12;34!UBERON:0002791;7.17e-12;32!UBERON:0000956;5.99e-11;25!UBERON:0000203;5.99e-11;25!UBERON:0002619;2.74e-10;22!UBERON:0001950;1.09e-09;20!UBERON:0000073;2.98e-09;53!UBERON:0002616;2.98e-09;53!UBERON:0002780;5.58e-09;41!UBERON:0001890;5.58e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.67e-17,56;UBERON:0005068,8.67e-17,56;UBERON:0006241,8.67e-17,56;UBERON:0007135,8.67e-17,56;UBERON:0000073,1.10e-16,53;UBERON:0002616,1.10e-16,53;UBERON:0001893,1.36e-15,34;UBERON:0003528,2.84e-15,34;UBERON:0002020,2.84e-15,34;UBERON:0003075,3.18e-15,82;UBERON:0007284,3.18e-15,82;UBERON:0001869,6.42e-15,32;UBERON:0001017,7.97e-15,81;UBERON:0002791,1.11e-14,32;UBERON:0002780,5.82e-14,41;UBERON:0001890,5.82e-14,41;UBERON:0003080,5.82e-14,41;UBERON:0006240,5.82e-14,41;UBERON:0002346,2.60e-13,86;UBERON:0000955,2.68e-13,68;UBERON:0006238,2.68e-13,68;UBERON:0001016,4.86e-13,89;UBERON:0010314,1.09e-12,132;UBERON:0003056,3.89e-12,61;UBERON:0000956,2.68e-11,25;UBERON:0000203,2.68e-11,25;UBERON:0010371,1.05e-10,104;UBERON:0002619,1.23e-10,22;UBERON:0001950,7.81e-10,20;UBERON:0007023,6.91e-08,114 | |||
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| ||
|short_description=p3@CAMTA1 | |||
}} | }} |
Latest revision as of 02:42, 19 September 2015
Short description: | p3@CAMTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAMTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000467404_5end |
EntrezGene: | CAMTA1 |
HGNC: | 18806 |
UniProt: | G3V297 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.67e-17 | 56 |
neural rod | 8.67e-17 | 56 |
future spinal cord | 8.67e-17 | 56 |
neural keel | 8.67e-17 | 56 |
regional part of nervous system | 1.10e-16 | 53 |
regional part of brain | 1.10e-16 | 53 |
telencephalon | 1.36e-15 | 34 |
brain grey matter | 2.84e-15 | 34 |
gray matter | 2.84e-15 | 34 |
neural plate | 3.18e-15 | 82 |
presumptive neural plate | 3.18e-15 | 82 |
cerebral hemisphere | 6.42e-15 | 32 |
central nervous system | 7.97e-15 | 81 |
regional part of telencephalon | 1.11e-14 | 32 |
regional part of forebrain | 5.82e-14 | 41 |
forebrain | 5.82e-14 | 41 |
anterior neural tube | 5.82e-14 | 41 |
future forebrain | 5.82e-14 | 41 |
neurectoderm | 2.60e-13 | 86 |
brain | 2.68e-13 | 68 |
future brain | 2.68e-13 | 68 |
nervous system | 4.86e-13 | 89 |
structure with developmental contribution from neural crest | 1.09e-12 | 132 |
pre-chordal neural plate | 3.89e-12 | 61 |
cerebral cortex | 2.68e-11 | 25 |
pallium | 2.68e-11 | 25 |
ecto-epithelium | 1.05e-10 | 104 |
regional part of cerebral cortex | 1.23e-10 | 22 |
neocortex | 7.81e-10 | 20 |
adult organism | 6.91e-08 | 114 |