FFCP PHASE1:Hg19::chr19:49139477..49139552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1628 | |EntrezGene=1628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2697 | |HGNC=2697 | ||
|TSSclassifier=strong | |||
|UniProt=Q10586 | |UniProt=Q10586 | ||
|association_with_transcript=-490bp_to_D28468_5end | |association_with_transcript=-490bp_to_D28468_5end | ||
|cluster_id=chr19:49139477..49139552,- | |||
|description=CAGE_peak_4_at_DBP_5end | |description=CAGE_peak_4_at_DBP_5end | ||
|id=chr19:49139477..49139552,- | |id=chr19:49139477..49139552,- | ||
|ontology_enrichment_celltype=CL:0000838!1.65e-10!52;CL:0000542!2.73e-10!53;CL:0000051!2.73e-10!53;CL:0002087!1.60e-09!119;CL:0000738!5.98e-09!140;CL:0000791!1.08e-08!18;CL:0000789!1.08e-08!18;CL:0002420!1.08e-08!18;CL:0002419!1.08e-08!18;CL:0000790!1.08e-08!18;CL:0002031!1.14e-07!124;CL:0000084!3.59e-07!25;CL:0000827!3.59e-07!25;CL:0000625!8.92e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.65e-10!52;CL:0000542!2.73e-10!53;CL:0000051!2.73e-10!53;CL:0002087!1.60e-09!119;CL:0000738!5.98e-09!140;CL:0000791!1.08e-08!18;CL:0000789!1.08e-08!18;CL:0002420!1.08e-08!18;CL:0002419!1.08e-08!18;CL:0000790!1.08e-08!18;CL:0002031!1.14e-07!124;CL:0000084!3.59e-07!25;CL:0000827!3.59e-07!25;CL:0000625!8.92e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.47e-10;18!CL:0000789;9.47e-10;18!CL:0002419;9.47e-10;18!CL:0000625;1.73e-09;11!CL:0000084;8.17e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.42e-10,18;CL:0000789,4.42e-10,18;CL:0002420,4.42e-10,18;CL:0002419,4.42e-10,18;CL:0000790,4.42e-10,18;CL:0000625,9.90e-10,11;CL:0000838,5.34e-08,52;CL:0000542,1.04e-07,53;CL:0000051,1.04e-07,53;CL:0000084,6.30e-07,25;CL:0000827,6.30e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.47e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-24!115;UBERON:0002780!7.51e-14!41;UBERON:0001890!7.51e-14!41;UBERON:0006240!7.51e-14!41;UBERON:0001049!4.47e-13!57;UBERON:0005068!4.47e-13!57;UBERON:0006241!4.47e-13!57;UBERON:0007135!4.47e-13!57;UBERON:0003080!4.84e-13!42;UBERON:0001869!1.30e-11!32;UBERON:0005743!1.37e-11!86;UBERON:0001893!2.45e-11!34;UBERON:0002020!2.74e-11!34;UBERON:0003528!2.74e-11!34;UBERON:0001017!7.00e-11!82;UBERON:0002791!7.21e-11!33;UBERON:0002616!2.72e-10!59;UBERON:0000073!3.83e-10!94;UBERON:0001016!3.83e-10!94;UBERON:0002619!8.17e-10!22;UBERON:0002346!2.03e-09!90;UBERON:0000955!2.26e-09!69;UBERON:0006238!2.26e-09!69;UBERON:0001950!4.74e-09!20;UBERON:0003075!5.01e-09!86;UBERON:0007284!5.01e-09!86;UBERON:0003056!3.26e-08!61;UBERON:0000956!1.02e-07!25;UBERON:0000203!1.02e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!2.66e-24!115;UBERON:0002780!7.51e-14!41;UBERON:0001890!7.51e-14!41;UBERON:0006240!7.51e-14!41;UBERON:0001049!4.47e-13!57;UBERON:0005068!4.47e-13!57;UBERON:0006241!4.47e-13!57;UBERON:0007135!4.47e-13!57;UBERON:0003080!4.84e-13!42;UBERON:0001869!1.30e-11!32;UBERON:0005743!1.37e-11!86;UBERON:0001893!2.45e-11!34;UBERON:0002020!2.74e-11!34;UBERON:0003528!2.74e-11!34;UBERON:0001017!7.00e-11!82;UBERON:0002791!7.21e-11!33;UBERON:0002616!2.72e-10!59;UBERON:0000073!3.83e-10!94;UBERON:0001016!3.83e-10!94;UBERON:0002619!8.17e-10!22;UBERON:0002346!2.03e-09!90;UBERON:0000955!2.26e-09!69;UBERON:0006238!2.26e-09!69;UBERON:0001950!4.74e-09!20;UBERON:0003075!5.01e-09!86;UBERON:0007284!5.01e-09!86;UBERON:0003056!3.26e-08!61;UBERON:0000956!1.02e-07!25;UBERON:0000203!1.02e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.10e-13;32!UBERON:0002791;1.60e-12;32!UBERON:0001893;1.97e-12;34!UBERON:0002780;4.76e-12;41!UBERON:0001890;4.76e-12;41!UBERON:0003528;5.07e-11;34!UBERON:0002020;5.07e-11;34!UBERON:0002619;3.68e-10;22!UBERON:0001950;6.07e-10;20!UBERON:0002420;1.94e-08;9!UBERON:0007245;1.94e-08;9!UBERON:0010009;1.94e-08;9!UBERON:0010011;1.94e-08;9!UBERON:0000454;1.94e-08;9!UBERON:0000956;2.07e-08;25!UBERON:0000203;2.07e-08;25!UBERON:0000073;4.12e-07;53!UBERON:0002616;4.12e-07;53!UBERON:0007023;4.72e-07;114!UBERON:0009663;5.81e-07;7!UBERON:0000955;6.28e-07;68 | |||
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| ||
|short_description=p4@DBP | |short_description=p4@DBP | ||
}} | }} |
Latest revision as of 03:25, 19 September 2015
Short description: | p4@DBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DBP_5end |
Coexpression cluster: | NA |
Association with transcript: | -490bp_to_D28468_5end |
EntrezGene: | DBP |
HGNC: | 2697 |
UniProt: | Q10586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.42e-10 | 18 |
alpha-beta T cell | 4.42e-10 | 18 |
immature T cell | 4.42e-10 | 18 |
mature T cell | 4.42e-10 | 18 |
immature alpha-beta T cell | 4.42e-10 | 18 |
CD8-positive, alpha-beta T cell | 9.90e-10 | 11 |
lymphoid lineage restricted progenitor cell | 5.34e-08 | 52 |
lymphocyte | 1.04e-07 | 53 |
common lymphoid progenitor | 1.04e-07 | 53 |
T cell | 6.30e-07 | 25 |
pro-T cell | 6.30e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.43e-22 | 114 |
regional part of forebrain | 5.97e-16 | 41 |
forebrain | 5.97e-16 | 41 |
anterior neural tube | 5.97e-16 | 41 |
future forebrain | 5.97e-16 | 41 |
cerebral hemisphere | 9.73e-15 | 32 |
telencephalon | 1.97e-13 | 34 |
regional part of telencephalon | 2.65e-13 | 32 |
regional part of nervous system | 1.73e-12 | 53 |
regional part of brain | 1.73e-12 | 53 |
brain grey matter | 4.16e-12 | 34 |
gray matter | 4.16e-12 | 34 |
neural tube | 2.58e-11 | 56 |
neural rod | 2.58e-11 | 56 |
future spinal cord | 2.58e-11 | 56 |
neural keel | 2.58e-11 | 56 |
pre-chordal neural plate | 2.87e-11 | 61 |
regional part of cerebral cortex | 2.34e-10 | 22 |
neocortex | 3.73e-10 | 20 |
brain | 6.60e-10 | 68 |
future brain | 6.60e-10 | 68 |
central nervous system | 6.30e-09 | 81 |
basal ganglion | 1.37e-08 | 9 |
nuclear complex of neuraxis | 1.37e-08 | 9 |
aggregate regional part of brain | 1.37e-08 | 9 |
collection of basal ganglia | 1.37e-08 | 9 |
cerebral subcortex | 1.37e-08 | 9 |
cerebral cortex | 1.41e-08 | 25 |
pallium | 1.41e-08 | 25 |
neural plate | 6.35e-08 | 82 |
presumptive neural plate | 6.35e-08 | 82 |
nervous system | 1.02e-07 | 89 |
neurectoderm | 1.08e-07 | 86 |
telencephalic nucleus | 6.10e-07 | 7 |