FFCP PHASE1:Hg19::chr11:64949391..64949454,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64949391..64949454,+ to FFCP PHASE1:Hg19::chr11:64949391..64949454,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIA9,E9PJJ3 | |UniProt=E9PIA9,E9PJJ3 | ||
|association_with_transcript=0bp_to_ENST00000259755,ENST00000527189,ENST00000527469,ENST00000532285,ENST00000534373_5end | |||
|cluster_id=chr11:64949391..64949454,+ | |||
|description=CAGE_peak_1_at_CAPN1_5end | |||
|id=chr11:64949391..64949454,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.87e-23!246;CL:0002371!5.81e-23!591;CL:0002321!1.03e-22!248;CL:0000548!1.82e-21!679;CL:0000004!1.82e-21!679;CL:0000255!1.82e-21!679;CL:0000012!1.86e-21!682;CL:0000144!1.02e-20!625;CL:0000222!1.56e-19!119;CL:0000003!7.13e-17!722;CL:0000066!9.30e-16!254;CL:0000192!5.71e-15!42;CL:0000514!5.71e-15!42;CL:0000183!1.23e-13!59;CL:0000359!1.08e-12!32;CL:0000187!4.97e-12!54;CL:0000680!6.19e-12!57;CL:0000056!6.19e-12!57;CL:0000355!6.19e-12!57;CL:0000076!1.04e-11!62;CL:0000055!6.13e-11!180;CL:0000063!4.01e-10!578;CL:0002076!9.50e-10!43;CL:0000393!2.42e-09!60;CL:0000211!2.42e-09!60;CL:0002078!1.32e-08!44;CL:0000115!1.83e-08!35;CL:1000449!8.20e-08!16;CL:1000497!3.39e-07!18;CL:0002518!3.39e-07!18;CL:0000071!3.86e-07!18;CL:0002546!3.86e-07!18;CL:0000213!4.05e-07!57;CL:0000215!4.05e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.94e-12;32!CL:0000192;1.44e-10;43!CL:1000449;2.40e-08;15!CL:1000497;1.24e-07;17!CL:0002518;1.24e-07;17!CL:0000115;1.67e-07;36!CL:0002076;1.78e-07;42!CL:1000507;3.76e-07;10!CL:1000494;3.76e-07;10!CL:0000071;3.88e-07;18!CL:0002681;8.18e-07;12!CL:0002584;8.18e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.82e-23,250;CL:0000222,1.49e-19,121;CL:0000066,7.65e-16,253;CL:0000192,1.42e-14,43;CL:0000514,1.42e-14,43;CL:0000359,1.08e-12,32;CL:0000076,6.21e-12,63;CL:0000187,8.99e-12,55;CL:0000680,1.08e-11,58;CL:0000056,1.08e-11,58;CL:0000355,1.08e-11,58;CL:0002076,1.58e-09,42;CL:0000393,3.69e-09,61;CL:0000211,3.69e-09,61;CL:0002078,8.48e-09,45;CL:0000115,1.18e-08,36;CL:1000449,2.43e-08,15;CL:1000497,1.25e-07,17;CL:0002518,1.25e-07,17;CL:0000213,2.67e-07,58;CL:0000215,2.67e-07,58;CL:0000071,3.86e-07,18;CL:0002546,3.86e-07,18;CL:1000507,3.86e-07,10;CL:1000494,3.86e-07,10;CL:0002681,8.17e-07,12;CL:0002584,8.17e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.44e-10;43!CL:0002546;3.88e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.60e-17!118;UBERON:0004872!1.96e-16!84;UBERON:0001637!2.48e-16!42;UBERON:0003509!2.48e-16!42;UBERON:0004572!2.48e-16!42;UBERON:0001981!4.49e-16!60;UBERON:0007500!4.49e-16!60;UBERON:0004537!4.49e-16!60;UBERON:0006965!4.49e-16!60;UBERON:0002049!5.15e-16!79;UBERON:0007798!5.15e-16!79;UBERON:0000055!2.60e-15!69;UBERON:0004535!4.15e-14!110;UBERON:0001009!6.29e-14!113;UBERON:0005256!2.38e-13!143;UBERON:0004573!2.03e-12!33;UBERON:0004571!2.03e-12!33;UBERON:0000490!2.44e-12!138;UBERON:0000486!3.66e-12!82;UBERON:0002100!1.11e-11!216;UBERON:0000914!6.00e-11!83;UBERON:0002329!6.00e-11!83;UBERON:0003077!6.00e-11!83;UBERON:0003059!6.00e-11!83;UBERON:0007282!6.00e-11!83;UBERON:0009618!6.00e-11!83;UBERON:0007285!6.00e-11!83;UBERON:0004290!5.65e-10!70;UBERON:0001134!1.36e-09!61;UBERON:0002036!1.36e-09!61;UBERON:0003082!1.36e-09!61;UBERON:0002385!1.54e-09!63;UBERON:0001015!1.54e-09!63;UBERON:0000383!1.54e-09!63;UBERON:0000926!7.50e-09!448;UBERON:0004120!7.50e-09!448;UBERON:0006603!7.50e-09!448;UBERON:0003102!1.41e-08!95;UBERON:0003104!2.29e-08!238;UBERON:0009142!2.29e-08!238;UBERON:0003081!4.59e-08!216;UBERON:0004211!8.20e-08!16;UBERON:0001285!8.20e-08!16;UBERON:0007684!8.20e-08!16;UBERON:0003220!8.20e-08!16;UBERON:0004208!8.20e-08!16;UBERON:0006555!1.12e-07!17;UBERON:0005103!1.12e-07!17;UBERON:0000083!1.12e-07!17;UBERON:0009201!1.12e-07!17;UBERON:0004819!1.12e-07!17;UBERON:0006553!1.12e-07!17;UBERON:0003074!1.12e-07!17;UBERON:0003060!1.12e-07!17;UBERON:0000947!1.80e-07!21;UBERON:0010191!1.80e-07!21;UBERON:0000080!1.91e-07!18;UBERON:0002120!1.91e-07!18;UBERON:0004875!1.91e-07!18;UBERON:0005721!1.91e-07!18;UBERON:0005754!1.91e-07!18;UBERON:0007297!1.91e-07!18;UBERON:0000487!3.27e-07!22;UBERON:0001986!3.86e-07!18;UBERON:0004638!3.86e-07!18;UBERON:0004852!3.86e-07!18;UBERON:0004876!5.23e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.01e-12;42!UBERON:0003509;7.01e-12;42!UBERON:0004572;7.01e-12;42!UBERON:0003914;1.86e-11;74!UBERON:0004573;2.27e-11;33!UBERON:0004571;2.27e-11;33!UBERON:0007500;5.09e-11;56!UBERON:0001981;5.09e-11;56!UBERON:0004537;5.09e-11;56!UBERON:0000055;9.14e-09;65!UBERON:0006555;2.40e-08;15!UBERON:0004819;2.40e-08;15!UBERON:0001285;2.40e-08;15!UBERON:0007684;2.40e-08;15!UBERON:0000025;9.92e-08;93!UBERON:0002049;1.81e-07;75!UBERON:0007798;1.81e-07;75!UBERON:0000947;1.82e-07;21!UBERON:0010191;1.82e-07;21!UBERON:0000487;3.25e-07;22!UBERON:0004211;3.76e-07;10!UBERON:0009773;3.76e-07;10!UBERON:0001231;3.76e-07;10!UBERON:0004810;3.76e-07;10!UBERON:0004638;3.88e-07;18!UBERON:0001986;3.88e-07;18!UBERON:0004852;3.88e-07;18!UBERON:0000490;4.27e-07;33!UBERON:0001225;8.18e-07;12!UBERON:0008987;8.18e-07;12 | |||
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| ||
|short_description=p1@CAPN1 | |||
}} | }} |
Latest revision as of 06:47, 19 September 2015
Short description: | p1@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000259755, ENST00000527189, ENST00000527469, ENST00000532285, ENST00000534373_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | E9PIA9E9PJJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.82e-23 | 250 |
mesodermal cell | 1.49e-19 | 121 |
epithelial cell | 7.65e-16 | 253 |
smooth muscle cell | 1.42e-14 | 43 |
smooth muscle myoblast | 1.42e-14 | 43 |
vascular associated smooth muscle cell | 1.08e-12 | 32 |
squamous epithelial cell | 6.21e-12 | 63 |
muscle cell | 8.99e-12 | 55 |
muscle precursor cell | 1.08e-11 | 58 |
myoblast | 1.08e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-11 | 58 |
endo-epithelial cell | 1.58e-09 | 42 |
electrically responsive cell | 3.69e-09 | 61 |
electrically active cell | 3.69e-09 | 61 |
meso-epithelial cell | 8.48e-09 | 45 |
endothelial cell | 1.18e-08 | 36 |
epithelial cell of nephron | 2.43e-08 | 15 |
kidney cell | 1.25e-07 | 17 |
kidney epithelial cell | 1.25e-07 | 17 |
lining cell | 2.67e-07 | 58 |
barrier cell | 2.67e-07 | 58 |
blood vessel endothelial cell | 3.86e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.86e-07 | 18 |
kidney tubule cell | 3.86e-07 | 10 |
nephron tubule epithelial cell | 3.86e-07 | 10 |
kidney cortical cell | 8.17e-07 | 12 |
renal cortical epithelial cell | 8.17e-07 | 12 |