FFCP PHASE1:Hg19::chr19:50354430..50354447,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:50354430..50354447,+
|short_description=p2@PTOV1
|description=CAGE_peak_2_at_PTOV1_5end
|association_with_transcript=14bp_to_ENST00000391842,NM_017432,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53635 | |EntrezGene=53635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9632 | |HGNC=9632 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YD1 | |UniProt=Q86YD1 | ||
|association_with_transcript=14bp_to_ENST00000391842,NM_017432,uc002pqd.2,uc002pqe.1,uc002pqf.1_5end | |||
|cluster_id=chr19:50354430..50354447,+ | |||
|coexpression_cluster_id=C3301 | |||
|description=CAGE_peak_2_at_PTOV1_5end | |||
|id=chr19:50354430..50354447,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.50e-18!248;CL:0000220!4.53e-17!246;CL:0000222!2.43e-16!119;CL:0000055!9.80e-16!180;CL:0000393!4.77e-14!60;CL:0000211!4.77e-14!60;CL:0000183!1.04e-13!59;CL:0000187!1.87e-11!54;CL:0000680!8.67e-11!57;CL:0000056!8.67e-11!57;CL:0000355!8.67e-11!57;CL:0000192!4.93e-10!42;CL:0000514!4.93e-10!42;CL:0000359!5.22e-09!32;CL:0000133!1.53e-08!59;CL:0000221!5.78e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.39e-08;32!CL:0000192;1.07e-07;43!CL:0000393;1.31e-07;61!CL:0000211;1.31e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.67e-18,250;CL:0000222,1.09e-16,121;CL:0000393,3.97e-14,61;CL:0000211,3.97e-14,61;CL:0000187,1.54e-11,55;CL:0000680,7.05e-11,58;CL:0000056,7.05e-11,58;CL:0000355,7.05e-11,58;CL:0000192,4.14e-10,43;CL:0000514,4.14e-10,43;CL:0000359,5.22e-09,32;CL:0000133,1.53e-08,59;CL:0000221,3.47e-07,72;CL:0000213,7.30e-07,58;CL:0000215,7.30e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003914;2.88e-07;74!UBERON:0001637;2.91e-07;42!UBERON:0003509;2.91e-07;42!UBERON:0004572;2.91e-07;42!UBERON:0007500;3.54e-07;56!UBERON:0001981;3.54e-07;56!UBERON:0004537;3.54e-07;56 | |||
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|short_description=p2@PTOV1 | |||
}} | }} |
Latest revision as of 09:13, 19 September 2015
Short description: | p2@PTOV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTOV1_5end |
Coexpression cluster: | C3301_Renal_Placental_Mesenchymal_Pericytes_Osteoblast_Astrocyte_Nucleus |
Association with transcript: | 14bp_to_ENST00000391842, NM_017432, uc002pqd.2, uc002pqe.1, uc002pqf.1_5end |
EntrezGene: | PTOV1 |
HGNC: | 9632 |
UniProt: | Q86YD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.67e-18 | 250 |
mesodermal cell | 1.09e-16 | 121 |
electrically responsive cell | 3.97e-14 | 61 |
electrically active cell | 3.97e-14 | 61 |
muscle cell | 1.54e-11 | 55 |
muscle precursor cell | 7.05e-11 | 58 |
myoblast | 7.05e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.05e-11 | 58 |
smooth muscle cell | 4.14e-10 | 43 |
smooth muscle myoblast | 4.14e-10 | 43 |
vascular associated smooth muscle cell | 5.22e-09 | 32 |
neurectodermal cell | 1.53e-08 | 59 |
ectodermal cell | 3.47e-07 | 72 |
lining cell | 7.30e-07 | 58 |
barrier cell | 7.30e-07 | 58 |