FFCP PHASE1:Hg19::chr14:23790690..23790701,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8106 | |EntrezGene=8106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8565 | |HGNC=8565 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4T2 | |UniProt=G3V4T2 | ||
|association_with_transcript=-50bp_to_ENST00000556821_5end | |association_with_transcript=-50bp_to_ENST00000556821_5end | ||
|cluster_id=chr14:23790690..23790701,+ | |||
|description=CAGE_peak_3_at_PABPN1_5end | |description=CAGE_peak_3_at_PABPN1_5end | ||
|id=chr14:23790690..23790701,+ | |id=chr14:23790690..23790701,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.63e-12!94;UBERON:0001016!9.63e-12!94;UBERON:0001017!2.88e-11!82;UBERON:0001049!3.75e-11!57;UBERON:0005068!3.75e-11!57;UBERON:0006241!3.75e-11!57;UBERON:0007135!3.75e-11!57;UBERON:0000955!9.46e-11!69;UBERON:0006238!9.46e-11!69;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0002616!1.13e-10!59;UBERON:0005743!1.57e-10!86;UBERON:0002346!2.92e-10!90;UBERON:0001869!5.06e-10!32;UBERON:0001893!6.91e-10!34;UBERON:0002780!9.35e-10!41;UBERON:0001890!9.35e-10!41;UBERON:0006240!9.35e-10!41;UBERON:0003075!1.01e-09!86;UBERON:0007284!1.01e-09!86;UBERON:0000025!1.15e-09!194;UBERON:0002791!1.51e-09!33;UBERON:0003056!1.70e-09!61;UBERON:0003080!1.89e-09!42;UBERON:0002619!4.48e-09!22;UBERON:0000956!1.10e-08!25;UBERON:0000203!1.10e-08!25;UBERON:0001950!6.50e-08!20;UBERON:0000033!2.46e-07!123;UBERON:0000924!4.73e-07!173;UBERON:0006601!4.73e-07!173;UBERON:0000477!5.16e-07!286 | |ontology_enrichment_uberon=UBERON:0000073!9.63e-12!94;UBERON:0001016!9.63e-12!94;UBERON:0001017!2.88e-11!82;UBERON:0001049!3.75e-11!57;UBERON:0005068!3.75e-11!57;UBERON:0006241!3.75e-11!57;UBERON:0007135!3.75e-11!57;UBERON:0000955!9.46e-11!69;UBERON:0006238!9.46e-11!69;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0002616!1.13e-10!59;UBERON:0005743!1.57e-10!86;UBERON:0002346!2.92e-10!90;UBERON:0001869!5.06e-10!32;UBERON:0001893!6.91e-10!34;UBERON:0002780!9.35e-10!41;UBERON:0001890!9.35e-10!41;UBERON:0006240!9.35e-10!41;UBERON:0003075!1.01e-09!86;UBERON:0007284!1.01e-09!86;UBERON:0000025!1.15e-09!194;UBERON:0002791!1.51e-09!33;UBERON:0003056!1.70e-09!61;UBERON:0003080!1.89e-09!42;UBERON:0002619!4.48e-09!22;UBERON:0000956!1.10e-08!25;UBERON:0000203!1.10e-08!25;UBERON:0001950!6.50e-08!20;UBERON:0000033!2.46e-07!123;UBERON:0000924!4.73e-07!173;UBERON:0006601!4.73e-07!173;UBERON:0000477!5.16e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.12e-09;34!UBERON:0002020;1.12e-09;34!UBERON:0001869;1.32e-09;32!UBERON:0002791;1.82e-09;32!UBERON:0000956;2.81e-09;25!UBERON:0000203;2.81e-09;25!UBERON:0002619;3.07e-09;22!UBERON:0001893;5.08e-09;34!UBERON:0001950;4.95e-08;20!UBERON:0002780;9.17e-08;41!UBERON:0001890;9.17e-08;41!UBERON:0000073;2.26e-07;53!UBERON:0002616;2.26e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.12e-09;34!UBERON:0002020;1.12e-09;34!UBERON:0001869;1.32e-09;32!UBERON:0002791;1.82e-09;32!UBERON:0000956;2.81e-09;25!UBERON:0000203;2.81e-09;25!UBERON:0002619;3.07e-09;22!UBERON:0001893;5.08e-09;34!UBERON:0001950;4.95e-08;20!UBERON:0002780;9.17e-08;41!UBERON:0001890;9.17e-08;41!UBERON:0000073;2.26e-07;53!UBERON:0002616;2.26e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.61e-13,89;UBERON:0000073,2.15e-12,53;UBERON:0002616,2.15e-12,53;UBERON:0001049,9.68e-12,56;UBERON:0005068,9.68e-12,56;UBERON:0006241,9.68e-12,56;UBERON:0007135,9.68e-12,56;UBERON:0001017,1.16e-11,81;UBERON:0000955,4.97e-11,68;UBERON:0006238,4.97e-11,68;UBERON:0003528,7.42e-11,34;UBERON:0002020,7.42e-11,34;UBERON:0002346,1.24e-10,86;UBERON:0003075,3.42e-10,82;UBERON:0007284,3.42e-10,82;UBERON:0001869,3.66e-10,32;UBERON:0001893,5.02e-10,34;UBERON:0002791,6.62e-10,32;UBERON:0002780,6.82e-10,41;UBERON:0001890,6.82e-10,41;UBERON:0003080,6.82e-10,41;UBERON:0006240,6.82e-10,41;UBERON:0003056,1.99e-09,61;UBERON:0000025,2.16e-09,192;UBERON:0002619,3.35e-09,22;UBERON:0000956,8.37e-09,25;UBERON:0000203,8.37e-09,25;UBERON:0001950,5.08e-08,20;UBERON:0010371,4.52e-07,104;UBERON:0004121,4.70e-07,171;UBERON:0000924,4.70e-07,171;UBERON:0006601,4.70e-07,171 | |||
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| ||
|short_description=p3@PABPN1 | |short_description=p3@PABPN1 | ||
}} | }} |
Latest revision as of 09:32, 19 September 2015
Short description: | p3@PABPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PABPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000556821_5end |
EntrezGene: | PABPN1 |
HGNC: | 8565 |
UniProt: | G3V4T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.61e-13 | 89 |
regional part of nervous system | 2.15e-12 | 53 |
regional part of brain | 2.15e-12 | 53 |
neural tube | 9.68e-12 | 56 |
neural rod | 9.68e-12 | 56 |
future spinal cord | 9.68e-12 | 56 |
neural keel | 9.68e-12 | 56 |
central nervous system | 1.16e-11 | 81 |
brain | 4.97e-11 | 68 |
future brain | 4.97e-11 | 68 |
brain grey matter | 7.42e-11 | 34 |
gray matter | 7.42e-11 | 34 |
neurectoderm | 1.24e-10 | 86 |
neural plate | 3.42e-10 | 82 |
presumptive neural plate | 3.42e-10 | 82 |
cerebral hemisphere | 3.66e-10 | 32 |
telencephalon | 5.02e-10 | 34 |
regional part of telencephalon | 6.62e-10 | 32 |
regional part of forebrain | 6.82e-10 | 41 |
forebrain | 6.82e-10 | 41 |
anterior neural tube | 6.82e-10 | 41 |
future forebrain | 6.82e-10 | 41 |
pre-chordal neural plate | 1.99e-09 | 61 |
tube | 2.16e-09 | 192 |
regional part of cerebral cortex | 3.35e-09 | 22 |
cerebral cortex | 8.37e-09 | 25 |
pallium | 8.37e-09 | 25 |
neocortex | 5.08e-08 | 20 |
ecto-epithelium | 4.52e-07 | 104 |
ectoderm-derived structure | 4.70e-07 | 171 |
ectoderm | 4.70e-07 | 171 |
presumptive ectoderm | 4.70e-07 | 171 |