FFCP PHASE1:Hg19::chr5:10441970..10442056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83853 | |EntrezGene=83853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24060 | |HGNC=24060 | ||
|TSSclassifier=strong | |||
|UniProt=Q96C74 | |UniProt=Q96C74 | ||
|association_with_transcript=0bp_to_ENST00000274134,ENST00000510520,NM_001201466,NM_031916,uc003jex.3_5end | |association_with_transcript=0bp_to_ENST00000274134,ENST00000510520,NM_001201466,NM_031916,uc003jex.3_5end | ||
|cluster_id=chr5:10441970..10442056,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ROPN1L_5end | |description=CAGE_peak_1_at_ROPN1L_5end | ||
|id=chr5:10441970..10442056,+ | |id=chr5:10441970..10442056,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.85e-17!115;UBERON:0001049!3.00e-12!57;UBERON:0005068!3.00e-12!57;UBERON:0006241!3.00e-12!57;UBERON:0007135!3.00e-12!57;UBERON:0002780!5.08e-12!41;UBERON:0001890!5.08e-12!41;UBERON:0006240!5.08e-12!41;UBERON:0003080!3.24e-11!42;UBERON:0002616!1.87e-10!59;UBERON:0000955!2.54e-10!69;UBERON:0006238!2.54e-10!69;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0002020!1.13e-09!34;UBERON:0003528!1.13e-09!34;UBERON:0001017!1.18e-09!82;UBERON:0001893!1.31e-09!34;UBERON:0001869!1.32e-09!32;UBERON:0002619!1.51e-09!22;UBERON:0005743!1.70e-09!86;UBERON:0000073!2.01e-09!94;UBERON:0001016!2.01e-09!94;UBERON:0002346!2.65e-09!90;UBERON:0002791!3.63e-09!33;UBERON:0001950!1.16e-08!20;UBERON:0000956!1.43e-07!25;UBERON:0000203!1.43e-07!25;UBERON:0003056!3.72e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.85e-17!115;UBERON:0001049!3.00e-12!57;UBERON:0005068!3.00e-12!57;UBERON:0006241!3.00e-12!57;UBERON:0007135!3.00e-12!57;UBERON:0002780!5.08e-12!41;UBERON:0001890!5.08e-12!41;UBERON:0006240!5.08e-12!41;UBERON:0003080!3.24e-11!42;UBERON:0002616!1.87e-10!59;UBERON:0000955!2.54e-10!69;UBERON:0006238!2.54e-10!69;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0002020!1.13e-09!34;UBERON:0003528!1.13e-09!34;UBERON:0001017!1.18e-09!82;UBERON:0001893!1.31e-09!34;UBERON:0001869!1.32e-09!32;UBERON:0002619!1.51e-09!22;UBERON:0005743!1.70e-09!86;UBERON:0000073!2.01e-09!94;UBERON:0001016!2.01e-09!94;UBERON:0002346!2.65e-09!90;UBERON:0002791!3.63e-09!33;UBERON:0001950!1.16e-08!20;UBERON:0000956!1.43e-07!25;UBERON:0000203!1.43e-07!25;UBERON:0003056!3.72e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.72e-13;22!UBERON:0001950;3.36e-12;20!UBERON:0002780;1.20e-11;41!UBERON:0001890;1.20e-11;41!UBERON:0001893;1.35e-11;34!UBERON:0001869;1.53e-11;32!UBERON:0003528;1.59e-11;34!UBERON:0002020;1.59e-11;34!UBERON:0000956;5.28e-11;25!UBERON:0000203;5.28e-11;25!UBERON:0000073;1.01e-10;53!UBERON:0002616;1.01e-10;53!UBERON:0002791;1.39e-10;32!UBERON:0002298;9.13e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-20,114;UBERON:0000073,1.37e-17,53;UBERON:0002616,1.37e-17,53;UBERON:0001049,4.13e-17,56;UBERON:0005068,4.13e-17,56;UBERON:0006241,4.13e-17,56;UBERON:0007135,4.13e-17,56;UBERON:0002780,4.05e-16,41;UBERON:0001890,4.05e-16,41;UBERON:0003080,4.05e-16,41;UBERON:0006240,4.05e-16,41;UBERON:0000955,4.66e-14,68;UBERON:0006238,4.66e-14,68;UBERON:0002619,1.48e-13,22;UBERON:0003528,3.43e-13,34;UBERON:0002020,3.43e-13,34;UBERON:0001893,4.28e-13,34;UBERON:0001869,4.94e-13,32;UBERON:0001950,2.78e-12,20;UBERON:0001016,8.80e-12,89;UBERON:0002791,9.89e-12,32;UBERON:0003075,1.42e-11,82;UBERON:0007284,1.42e-11,82;UBERON:0001017,1.48e-11,81;UBERON:0000956,4.62e-11,25;UBERON:0000203,4.62e-11,25;UBERON:0002346,2.53e-10,86;UBERON:0003056,6.15e-10,61;UBERON:0010371,2.39e-07,104;UBERON:0002298,9.43e-07,6 | |||
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| ||
|short_description=p1@ROPN1L | |short_description=p1@ROPN1L | ||
}} | }} |
Latest revision as of 14:18, 19 September 2015
Short description: | p1@ROPN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ROPN1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000274134, ENST00000510520, NM_001201466, NM_031916, uc003jex.3_5end |
EntrezGene: | ROPN1L |
HGNC: | 24060 |
UniProt: | Q96C74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.82e-20 | 114 |
regional part of nervous system | 1.37e-17 | 53 |
regional part of brain | 1.37e-17 | 53 |
neural tube | 4.13e-17 | 56 |
neural rod | 4.13e-17 | 56 |
future spinal cord | 4.13e-17 | 56 |
neural keel | 4.13e-17 | 56 |
regional part of forebrain | 4.05e-16 | 41 |
forebrain | 4.05e-16 | 41 |
anterior neural tube | 4.05e-16 | 41 |
future forebrain | 4.05e-16 | 41 |
brain | 4.66e-14 | 68 |
future brain | 4.66e-14 | 68 |
regional part of cerebral cortex | 1.48e-13 | 22 |
brain grey matter | 3.43e-13 | 34 |
gray matter | 3.43e-13 | 34 |
telencephalon | 4.28e-13 | 34 |
cerebral hemisphere | 4.94e-13 | 32 |
neocortex | 2.78e-12 | 20 |
nervous system | 8.80e-12 | 89 |
regional part of telencephalon | 9.89e-12 | 32 |
neural plate | 1.42e-11 | 82 |
presumptive neural plate | 1.42e-11 | 82 |
central nervous system | 1.48e-11 | 81 |
cerebral cortex | 4.62e-11 | 25 |
pallium | 4.62e-11 | 25 |
neurectoderm | 2.53e-10 | 86 |
pre-chordal neural plate | 6.15e-10 | 61 |
ecto-epithelium | 2.39e-07 | 104 |
brainstem | 9.43e-07 | 6 |