FFCP PHASE1:Hg19::chr17:3571863..3571881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:3571863..3571881,- to FFCP PHASE1:Hg19::chr17:3571863..3571881,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30851 | |EntrezGene=30851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30684 | |HGNC=30684 | ||
|TSSclassifier=strong | |||
|UniProt=O14907 | |UniProt=O14907 | ||
|association_with_transcript=91bp_to_NM_001204698,NM_014604,uc002fwc.2,uc002fwe.1_5end | |||
|cluster_id=chr17:3571863..3571881,- | |||
|coexpression_cluster_id=C843 | |||
|description=CAGE_peak_1_at_TAX1BP3_5end | |||
|id=chr17:3571863..3571881,- | |||
|ontology_enrichment_celltype=CL:0000222!2.01e-31!119;CL:0000220!2.39e-31!246;CL:0002321!9.13e-31!248;CL:0000055!3.79e-24!180;CL:0000183!4.09e-19!59;CL:0000680!2.50e-18!57;CL:0000056!2.50e-18!57;CL:0000355!2.50e-18!57;CL:0000187!1.76e-17!54;CL:0000192!2.65e-17!42;CL:0000514!2.65e-17!42;CL:0000144!7.88e-16!625;CL:0000393!2.16e-15!60;CL:0000211!2.16e-15!60;CL:0000359!2.26e-15!32;CL:0000548!5.28e-15!679;CL:0000004!5.28e-15!679;CL:0000255!5.28e-15!679;CL:0002371!1.10e-14!591;CL:0000066!1.39e-14!254;CL:0000012!4.03e-14!682;CL:0000213!2.52e-12!57;CL:0000215!2.52e-12!57;CL:0000057!6.80e-10!75;CL:0002078!7.52e-10!44;CL:0000115!1.74e-09!35;CL:0002139!6.59e-09!24;CL:0000076!7.66e-09!62;CL:1000449!3.51e-08!16;CL:0000071!1.52e-07!18;CL:0002546!1.52e-07!18;CL:0002681!7.30e-07!13;CL:0002584!7.30e-07!13;CL:1000497!8.64e-07!18;CL:0002518!8.64e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.77e-14;32!CL:0000192;1.37e-12;43!CL:0000187;8.26e-10;55!CL:0002139;6.43e-09;24!CL:0000115;1.65e-08;36!CL:0000393;4.94e-08;61!CL:0000211;4.94e-08;61!CL:1000449;5.04e-08;15!CL:0000213;8.33e-08;58!CL:0000215;8.33e-08;58!CL:0000071;1.49e-07;18!CL:0002078;1.64e-07;45!CL:0000134;7.39e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.54e-32,121;CL:0002321,1.66e-31,250;CL:0000680,1.56e-18,58;CL:0000056,1.56e-18,58;CL:0000355,1.56e-18,58;CL:0000187,1.10e-17,55;CL:0000192,1.74e-17,43;CL:0000514,1.74e-17,43;CL:0000393,1.32e-15,61;CL:0000211,1.32e-15,61;CL:0000359,2.26e-15,32;CL:0000066,2.19e-14,253;CL:0000213,9.43e-13,58;CL:0000215,9.43e-13,58;CL:0002078,2.85e-10,45;CL:0000057,6.01e-10,76;CL:0000115,6.34e-10,36;CL:0000076,2.74e-09,63;CL:0002139,6.59e-09,24;CL:1000449,5.00e-08,15;CL:0000071,1.52e-07,18;CL:0002546,1.52e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;1.37e-12;43!CL:0000355;5.40e-10;58!CL:0000222;3.58e-09;121!CL:0002546;1.49e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.71e-25!118;UBERON:0002049!9.56e-25!79;UBERON:0007798!9.56e-25!79;UBERON:0004872!1.20e-23!84;UBERON:0000055!1.29e-22!69;UBERON:0005256!1.33e-21!143;UBERON:0001981!1.97e-21!60;UBERON:0007500!1.97e-21!60;UBERON:0004537!1.97e-21!60;UBERON:0006965!1.97e-21!60;UBERON:0000486!4.66e-20!82;UBERON:0001009!8.73e-20!113;UBERON:0004535!1.73e-19!110;UBERON:0002100!3.77e-19!216;UBERON:0000914!3.81e-19!83;UBERON:0002329!3.81e-19!83;UBERON:0003077!3.81e-19!83;UBERON:0003059!3.81e-19!83;UBERON:0007282!3.81e-19!83;UBERON:0009618!3.81e-19!83;UBERON:0007285!3.81e-19!83;UBERON:0001637!7.82e-19!42;UBERON:0003509!7.82e-19!42;UBERON:0004572!7.82e-19!42;UBERON:0000490!1.83e-18!138;UBERON:0000468!2.65e-18!659;UBERON:0004290!5.15e-18!70;UBERON:0001134!4.05e-16!61;UBERON:0002036!4.05e-16!61;UBERON:0003082!4.05e-16!61;UBERON:0002385!6.04e-16!63;UBERON:0001015!6.04e-16!63;UBERON:0000383!6.04e-16!63;UBERON:0000119!1.96e-15!312;UBERON:0000467!2.08e-15!625;UBERON:0000483!4.35e-15!309;UBERON:0000480!4.66e-15!626;UBERON:0003104!1.30e-14!238;UBERON:0009142!1.30e-14!238;UBERON:0000926!3.04e-14!448;UBERON:0004120!3.04e-14!448;UBERON:0006603!3.04e-14!448;UBERON:0004573!4.03e-14!33;UBERON:0004571!4.03e-14!33;UBERON:0000475!3.44e-13!365;UBERON:0000481!6.10e-12!347;UBERON:0000477!1.00e-11!286;UBERON:0002050!5.45e-11!605;UBERON:0005423!5.45e-11!605;UBERON:0000923!5.68e-11!604;UBERON:0005291!5.68e-11!604;UBERON:0006598!5.68e-11!604;UBERON:0002532!5.68e-11!604;UBERON:0004111!1.72e-10!241;UBERON:0000922!1.81e-10!612;UBERON:0003103!8.67e-09!69;UBERON:0004211!3.51e-08!16;UBERON:0001285!3.51e-08!16;UBERON:0007684!3.51e-08!16;UBERON:0003220!3.51e-08!16;UBERON:0004208!3.51e-08!16;UBERON:0000947!3.65e-08!21;UBERON:0010191!3.65e-08!21;UBERON:0000025!7.36e-08!194;UBERON:0000080!9.71e-08!18;UBERON:0002120!9.71e-08!18;UBERON:0004875!9.71e-08!18;UBERON:0005721!9.71e-08!18;UBERON:0005754!9.71e-08!18;UBERON:0007297!9.71e-08!18;UBERON:0006555!1.02e-07!17;UBERON:0005103!1.02e-07!17;UBERON:0000083!1.02e-07!17;UBERON:0009201!1.02e-07!17;UBERON:0004819!1.02e-07!17;UBERON:0006553!1.02e-07!17;UBERON:0003074!1.02e-07!17;UBERON:0003060!1.02e-07!17;UBERON:0004876!1.09e-07!20;UBERON:0001986!1.52e-07!18;UBERON:0004638!1.52e-07!18;UBERON:0004852!1.52e-07!18;UBERON:0003102!3.00e-07!95;UBERON:0000353!3.29e-07!17;UBERON:0000487!5.99e-07!22;UBERON:0001225!7.30e-07!13;UBERON:0008987!7.30e-07!13;UBERON:0006914!7.80e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.66e-13;42!UBERON:0003509;1.66e-13;42!UBERON:0004572;1.66e-13;42!UBERON:0004573;8.27e-13;33!UBERON:0004571;8.27e-13;33!UBERON:0007500;1.30e-12;56!UBERON:0001981;1.30e-12;56!UBERON:0004537;1.30e-12;56!UBERON:0003914;7.87e-12;74!UBERON:0000055;5.34e-11;65!UBERON:0002049;2.15e-10;75!UBERON:0007798;2.15e-10;75!UBERON:0000947;3.74e-08;21!UBERON:0010191;3.74e-08;21!UBERON:0006555;5.04e-08;15!UBERON:0004819;5.04e-08;15!UBERON:0001285;5.04e-08;15!UBERON:0007684;5.04e-08;15!UBERON:0004638;1.49e-07;18!UBERON:0001986;1.49e-07;18!UBERON:0004852;1.49e-07;18!UBERON:0000025;2.18e-07;93!UBERON:0000353;4.16e-07;15!UBERON:0000490;5.49e-07;33!UBERON:0000487;5.88e-07;22!UBERON:0006914;7.72e-07;25 | |||
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| ||
|short_description=p1@TAX1BP3 | |||
}} | }} |
Latest revision as of 17:41, 19 September 2015
Short description: | p1@TAX1BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAX1BP3_5end |
Coexpression cluster: | C843_Alveolar_Mesenchymal_Hepatic_Placental_Renal_Smooth_Fibroblast |
Association with transcript: | 91bp_to_NM_001204698, NM_014604, uc002fwc.2, uc002fwe.1_5end |
EntrezGene: | TAX1BP3 |
HGNC: | 30684 |
UniProt: | O14907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.54e-32 | 121 |
embryonic cell | 1.66e-31 | 250 |
muscle precursor cell | 1.56e-18 | 58 |
myoblast | 1.56e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-18 | 58 |
muscle cell | 1.10e-17 | 55 |
smooth muscle cell | 1.74e-17 | 43 |
smooth muscle myoblast | 1.74e-17 | 43 |
electrically responsive cell | 1.32e-15 | 61 |
electrically active cell | 1.32e-15 | 61 |
vascular associated smooth muscle cell | 2.26e-15 | 32 |
epithelial cell | 2.19e-14 | 253 |
lining cell | 9.43e-13 | 58 |
barrier cell | 9.43e-13 | 58 |
meso-epithelial cell | 2.85e-10 | 45 |
fibroblast | 6.01e-10 | 76 |
endothelial cell | 6.34e-10 | 36 |
squamous epithelial cell | 2.74e-09 | 63 |
endothelial cell of vascular tree | 6.59e-09 | 24 |
epithelial cell of nephron | 5.00e-08 | 15 |
blood vessel endothelial cell | 1.52e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-07 | 18 |