FFCP PHASE1:Hg19::chr17:36981647..36981696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616416 | |EntrezGene=100616416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41709 | |HGNC=41709 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-394bp_to_NR_039880_5end | |association_with_transcript=-394bp_to_NR_039880_5end | ||
|cluster_id=chr17:36981647..36981696,+ | |||
|description=CAGE_peak_1_at_MIR4727_5end | |description=CAGE_peak_1_at_MIR4727_5end | ||
|id=chr17:36981647..36981696,+ | |id=chr17:36981647..36981696,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.78e-26!140;CL:0000037!4.06e-22!172;CL:0000566!4.06e-22!172;CL:0000988!5.05e-22!182;CL:0002031!1.57e-21!124;CL:0002087!4.29e-21!119;CL:0002032!7.53e-21!165;CL:0000837!7.53e-21!165;CL:0000860!1.27e-19!45;CL:0002057!9.69e-19!42;CL:0000766!5.83e-14!76;CL:0000838!3.82e-11!52;CL:0000542!7.36e-11!53;CL:0000051!7.36e-11!53;CL:0002009!1.22e-10!65;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0000557!1.96e-10!71;CL:0000839!4.19e-10!70;CL:0002194!7.34e-10!63;CL:0000576!7.34e-10!63;CL:0000040!7.34e-10!63;CL:0000559!7.34e-10!63 | |ontology_enrichment_celltype=CL:0000738!1.78e-26!140;CL:0000037!4.06e-22!172;CL:0000566!4.06e-22!172;CL:0000988!5.05e-22!182;CL:0002031!1.57e-21!124;CL:0002087!4.29e-21!119;CL:0002032!7.53e-21!165;CL:0000837!7.53e-21!165;CL:0000860!1.27e-19!45;CL:0002057!9.69e-19!42;CL:0000766!5.83e-14!76;CL:0000838!3.82e-11!52;CL:0000542!7.36e-11!53;CL:0000051!7.36e-11!53;CL:0002009!1.22e-10!65;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0000557!1.96e-10!71;CL:0000839!4.19e-10!70;CL:0002194!7.34e-10!63;CL:0000576!7.34e-10!63;CL:0000040!7.34e-10!63;CL:0000559!7.34e-10!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-18;33!CL:0002057;1.16e-18;33!CL:0000473;6.18e-12;39!CL:0000234;6.18e-12;39!CL:0000576;1.85e-11;48!CL:0002087;2.52e-09;104!CL:0000766;1.08e-08;69!CL:0000542;7.62e-08;53!CL:0000791;1.81e-07;18!CL:0000789;1.81e-07;18!CL:0002419;1.81e-07;18!CL:0000738;4.02e-07;136!CL:0000094;4.29e-07;8!CL:0000084;5.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.71e-29,136;CL:0002031,4.03e-24,120;CL:0002087,4.15e-24,115;CL:0000037,1.38e-23,168;CL:0000988,6.77e-23,177;CL:0002032,2.63e-22,161;CL:0000837,2.63e-22,161;CL:0000860,2.76e-21,42;CL:0002057,2.76e-21,42;CL:0000473,5.60e-17,48;CL:0000234,5.60e-17,48;CL:0000766,2.32e-16,72;CL:0002009,8.41e-13,61;CL:0000557,2.09e-12,67;CL:0000838,4.72e-12,52;CL:0002194,7.57e-12,59;CL:0000576,7.57e-12,59;CL:0000040,7.57e-12,59;CL:0000559,7.57e-12,59;CL:0000542,1.65e-11,53;CL:0000051,1.65e-11,53;CL:0000839,1.87e-11,66;CL:0000763,2.67e-11,108;CL:0000049,2.67e-11,108;CL:0000791,3.22e-07,18;CL:0000789,3.22e-07,18;CL:0002420,3.22e-07,18;CL:0002419,3.22e-07,18;CL:0000790,3.22e-07,18;CL:0000094,4.57e-07,8;CL:0000084,5.56e-07,25;CL:0000827,5.56e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.55e-16;42!CL:0000051;7.62e-08;53!CL:0000790;1.81e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;9.21e-10;41!UBERON:0001890;9.21e-10;41!UBERON:0002791;2.50e-09;32!UBERON:0001893;3.23e-09;34!UBERON:0001869;3.63e-09;32!UBERON:0003528;3.99e-09;34!UBERON:0002020;3.99e-09;34!UBERON:0000073;6.39e-09;53!UBERON:0002616;6.39e-09;53!UBERON:0000956;3.52e-07;25!UBERON:0000203;3.52e-07;25!UBERON:0001950;7.33e-07;20 | |||
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| ||
|short_description=p1@MIR4727 | |short_description=p1@MIR4727 | ||
}} | }} |
Latest revision as of 20:31, 19 September 2015
Short description: | p1@MIR4727 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4727_5end |
Coexpression cluster: | NA |
Association with transcript: | -394bp_to_NR_039880_5end |
EntrezGene: | MIR4727 |
HGNC: | 41709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.07e-15 | 56 |
neural rod | 7.07e-15 | 56 |
future spinal cord | 7.07e-15 | 56 |
neural keel | 7.07e-15 | 56 |
regional part of nervous system | 3.06e-14 | 53 |
regional part of brain | 3.06e-14 | 53 |
regional part of forebrain | 2.36e-13 | 41 |
forebrain | 2.36e-13 | 41 |
anterior neural tube | 2.36e-13 | 41 |
future forebrain | 2.36e-13 | 41 |
central nervous system | 4.38e-13 | 81 |
bone marrow | 2.72e-12 | 76 |
nervous system | 1.75e-11 | 89 |
hematopoietic system | 2.11e-11 | 98 |
blood island | 2.11e-11 | 98 |
bone element | 2.74e-11 | 82 |
brain grey matter | 3.89e-11 | 34 |
gray matter | 3.89e-11 | 34 |
telencephalon | 4.09e-11 | 34 |
brain | 5.65e-11 | 68 |
future brain | 5.65e-11 | 68 |
regional part of telencephalon | 1.37e-10 | 32 |
cerebral hemisphere | 1.96e-10 | 32 |
hemolymphoid system | 6.70e-10 | 108 |
immune system | 8.60e-10 | 93 |
neurectoderm | 1.85e-09 | 86 |
neural plate | 3.47e-09 | 82 |
presumptive neural plate | 3.47e-09 | 82 |
skeletal element | 1.59e-08 | 90 |
pre-chordal neural plate | 3.56e-08 | 61 |
cerebral cortex | 9.44e-08 | 25 |
pallium | 9.44e-08 | 25 |
neocortex | 2.70e-07 | 20 |
regional part of cerebral cortex | 4.43e-07 | 22 |