FFCP PHASE1:Hg19::chr9:115913271..115913298,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:115913271..115913298,+
|short_description=p1@SLC31A2
|description=CAGE_peak_1_at_SLC31A2_5end
|association_with_transcript=-11bp_to_ENST00000374220_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1318 | |EntrezGene=1318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11017 | |HGNC=11017 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3D2 | |UniProt=F2Z3D2 | ||
|association_with_transcript=-11bp_to_ENST00000374220_5end | |||
|cluster_id=chr9:115913271..115913298,+ | |||
|coexpression_cluster_id=C2936 | |||
|description=CAGE_peak_1_at_SLC31A2_5end | |||
|id=chr9:115913271..115913298,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-26!42;CL:0000766!1.62e-25!76;CL:0002009!3.57e-23!65;CL:0000557!5.18e-23!71;CL:0000860!3.29e-22!45;CL:0002194!4.15e-22!63;CL:0000576!4.15e-22!63;CL:0000040!4.15e-22!63;CL:0000559!4.15e-22!63;CL:0000839!8.15e-20!70;CL:0000763!7.31e-15!112;CL:0000049!7.31e-15!112;CL:0000738!2.37e-10!140;CL:0002087!5.59e-07!119;CL:0002031!8.78e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-20;33!CL:0002057;3.07e-20;33!CL:0000473;1.38e-18;39!CL:0000234;1.38e-18;39!CL:0000576;1.18e-16;48!CL:0000766;1.65e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.85e-29,72;CL:0000473,8.18e-29,48;CL:0000234,8.18e-29,48;CL:0002009,2.95e-27,61;CL:0000860,5.01e-27,42;CL:0002057,5.01e-27,42;CL:0000557,7.73e-27,67;CL:0002194,3.87e-26,59;CL:0000576,3.87e-26,59;CL:0000040,3.87e-26,59;CL:0000559,3.87e-26,59;CL:0000839,3.06e-23,66;CL:0000763,1.77e-17,108;CL:0000049,1.77e-17,108;CL:0000738,4.25e-12,136;CL:0002087,1.96e-08,115;CL:0002031,3.74e-08,120;CL:0000037,1.02e-07,168;CL:0002032,7.32e-07,161;CL:0000837,7.32e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;8.43e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-23!102;UBERON:0003061!1.74e-23!102;UBERON:0007023!5.53e-23!115;UBERON:0002193!4.77e-21!112;UBERON:0002371!2.47e-20!80;UBERON:0001474!8.23e-17!86;UBERON:0004765!2.02e-15!101;UBERON:0001434!2.02e-15!101;UBERON:0002405!3.46e-15!115;UBERON:0001049!2.48e-11!57;UBERON:0005068!2.48e-11!57;UBERON:0006241!2.48e-11!57;UBERON:0007135!2.48e-11!57;UBERON:0002616!8.80e-09!59;UBERON:0003080!1.06e-08!42;UBERON:0002780!1.86e-08!41;UBERON:0001890!1.86e-08!41;UBERON:0006240!1.86e-08!41;UBERON:0000062!4.69e-08!511;UBERON:0000479!1.41e-07!787;UBERON:0001893!1.86e-07!34;UBERON:0002020!2.04e-07!34;UBERON:0003528!2.04e-07!34;UBERON:0002204!3.54e-07!167;UBERON:0002791!4.48e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.89e-07;114!UBERON:0001893;7.12e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.53e-27,98;UBERON:0003061,6.53e-27,98;UBERON:0002193,5.86e-24,108;UBERON:0002371,6.68e-24,76;UBERON:0007023,1.27e-22,114;UBERON:0001474,7.22e-20,82;UBERON:0002405,1.29e-19,93;UBERON:0004765,1.08e-18,90;UBERON:0001434,7.58e-17,100;UBERON:0001049,4.44e-11,56;UBERON:0005068,4.44e-11,56;UBERON:0006241,4.44e-11,56;UBERON:0007135,4.44e-11,56;UBERON:0000073,6.40e-10,53;UBERON:0002616,6.40e-10,53;UBERON:0002050,1.96e-09,564;UBERON:0000923,8.61e-09,560;UBERON:0010316,8.61e-09,560;UBERON:0005291,8.61e-09,560;UBERON:0006598,8.61e-09,560;UBERON:0010317,8.61e-09,560;UBERON:0002532,8.61e-09,560;UBERON:0002780,1.20e-08,41;UBERON:0001890,1.20e-08,41;UBERON:0003080,1.20e-08,41;UBERON:0006240,1.20e-08,41;UBERON:0000479,1.06e-07,773;UBERON:0001893,1.23e-07,34;UBERON:0002204,1.35e-07,167;UBERON:0003528,1.36e-07,34;UBERON:0002020,1.36e-07,34;UBERON:0005423,2.29e-07,581;UBERON:0003081,8.37e-07,203;UBERON:0002791,9.60e-07,32 | |||
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| ||
|short_description=p1@SLC31A2 | |||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p1@SLC31A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC31A2_5end |
Coexpression cluster: | C2936_CD14_parotid_salivary_submaxillary_corpus_Mallassezderived_substantia |
Association with transcript: | -11bp_to_ENST00000374220_5end |
EntrezGene: | SLC31A2 |
HGNC: | 11017 |
UniProt: | F2Z3D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.85e-29 | 72 |
defensive cell | 8.18e-29 | 48 |
phagocyte | 8.18e-29 | 48 |
macrophage dendritic cell progenitor | 2.95e-27 | 61 |
classical monocyte | 5.01e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.01e-27 | 42 |
granulocyte monocyte progenitor cell | 7.73e-27 | 67 |
monopoietic cell | 3.87e-26 | 59 |
monocyte | 3.87e-26 | 59 |
monoblast | 3.87e-26 | 59 |
promonocyte | 3.87e-26 | 59 |
myeloid lineage restricted progenitor cell | 3.06e-23 | 66 |
myeloid cell | 1.77e-17 | 108 |
common myeloid progenitor | 1.77e-17 | 108 |
leukocyte | 4.25e-12 | 136 |
nongranular leukocyte | 1.96e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.74e-08 | 120 |
hematopoietic stem cell | 1.02e-07 | 168 |
hematopoietic oligopotent progenitor cell | 7.32e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.32e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.53e-27 | 98 |
blood island | 6.53e-27 | 98 |
hemolymphoid system | 5.86e-24 | 108 |
bone marrow | 6.68e-24 | 76 |
adult organism | 1.27e-22 | 114 |
bone element | 7.22e-20 | 82 |
immune system | 1.29e-19 | 93 |
skeletal element | 1.08e-18 | 90 |
skeletal system | 7.58e-17 | 100 |
neural tube | 4.44e-11 | 56 |
neural rod | 4.44e-11 | 56 |
future spinal cord | 4.44e-11 | 56 |
neural keel | 4.44e-11 | 56 |
regional part of nervous system | 6.40e-10 | 53 |
regional part of brain | 6.40e-10 | 53 |
embryonic structure | 1.96e-09 | 564 |
germ layer | 8.61e-09 | 560 |
germ layer / neural crest | 8.61e-09 | 560 |
embryonic tissue | 8.61e-09 | 560 |
presumptive structure | 8.61e-09 | 560 |
germ layer / neural crest derived structure | 8.61e-09 | 560 |
epiblast (generic) | 8.61e-09 | 560 |
regional part of forebrain | 1.20e-08 | 41 |
forebrain | 1.20e-08 | 41 |
anterior neural tube | 1.20e-08 | 41 |
future forebrain | 1.20e-08 | 41 |
tissue | 1.06e-07 | 773 |
telencephalon | 1.23e-07 | 34 |
musculoskeletal system | 1.35e-07 | 167 |
brain grey matter | 1.36e-07 | 34 |
gray matter | 1.36e-07 | 34 |
developing anatomical structure | 2.29e-07 | 581 |
lateral plate mesoderm | 8.37e-07 | 203 |
regional part of telencephalon | 9.60e-07 | 32 |