FFCP PHASE1:Hg19::chr6:99873145..99873196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |UniProt=Q8TF01 | ||
|association_with_transcript=0bp_to_ENST00000369239,ENST00000478777,ENST00000492294,ENST00000498075_5end | |association_with_transcript=0bp_to_ENST00000369239,ENST00000478777,ENST00000492294,ENST00000498075_5end | ||
|cluster_id=chr6:99873145..99873196,- | |||
|coexpression_cluster_id=C986 | |||
|description=CAGE_peak_1_at_PNISR_5end | |description=CAGE_peak_1_at_PNISR_5end | ||
|id=chr6:99873145..99873196,- | |id=chr6:99873145..99873196,- | ||
|ontology_enrichment_celltype=CL:0000037!5.72e-27!172;CL:0000566!5.72e-27!172;CL:0000738!1.75e-25!140;CL:0002032!5.57e-24!165;CL:0000837!5.57e-24!165;CL:0000988!1.30e-23!182;CL:0002031!5.82e-19!124;CL:0002087!2.21e-18!119;CL:0000542!4.98e-17!53;CL:0000051!4.98e-17!53;CL:0000838!5.11e-17!52;CL:0000791!8.38e-10!18;CL:0000789!8.38e-10!18;CL:0002420!8.38e-10!18;CL:0002419!8.38e-10!18;CL:0000790!8.38e-10!18;CL:0000763!2.75e-09!112;CL:0000049!2.75e-09!112;CL:0000084!5.96e-09!25;CL:0000827!5.96e-09!25;CL:0000945!6.10e-08!24;CL:0000826!6.10e-08!24;CL:0000236!1.04e-07!14;CL:0000766!2.01e-07!76;CL:0000625!4.31e-07!11 | |ontology_enrichment_celltype=CL:0000037!5.72e-27!172;CL:0000566!5.72e-27!172;CL:0000738!1.75e-25!140;CL:0002032!5.57e-24!165;CL:0000837!5.57e-24!165;CL:0000988!1.30e-23!182;CL:0002031!5.82e-19!124;CL:0002087!2.21e-18!119;CL:0000542!4.98e-17!53;CL:0000051!4.98e-17!53;CL:0000838!5.11e-17!52;CL:0000791!8.38e-10!18;CL:0000789!8.38e-10!18;CL:0002420!8.38e-10!18;CL:0002419!8.38e-10!18;CL:0000790!8.38e-10!18;CL:0000763!2.75e-09!112;CL:0000049!2.75e-09!112;CL:0000084!5.96e-09!25;CL:0000827!5.96e-09!25;CL:0000945!6.10e-08!24;CL:0000826!6.10e-08!24;CL:0000236!1.04e-07!14;CL:0000766!2.01e-07!76;CL:0000625!4.31e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.56e-10;53!CL:0000791;8.32e-10;18!CL:0000789;8.32e-10;18!CL:0002419;8.32e-10;18!CL:0000084;5.97e-09;25!CL:0000945;5.97e-08;24!CL:0000236;2.15e-07;13!CL:0002087;3.28e-07;104!CL:0000625;4.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.11e-27,168;CL:0000738,7.60e-26,136;CL:0000988,1.64e-24,177;CL:0002032,3.18e-24,161;CL:0000837,3.18e-24,161;CL:0002031,2.94e-19,120;CL:0002087,1.09e-18,115;CL:0000542,4.98e-17,53;CL:0000051,4.98e-17,53;CL:0000838,5.11e-17,52;CL:0000791,8.38e-10,18;CL:0000789,8.38e-10,18;CL:0002420,8.38e-10,18;CL:0002419,8.38e-10,18;CL:0000790,8.38e-10,18;CL:0000763,2.11e-09,108;CL:0000049,2.11e-09,108;CL:0000084,5.96e-09,25;CL:0000827,5.96e-09,25;CL:0000945,6.10e-08,24;CL:0000826,6.10e-08,24;CL:0000236,1.04e-07,14;CL:0000766,1.40e-07,72;CL:0000625,4.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.56e-10;53!CL:0000790;8.32e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-21!115;UBERON:0001049!3.48e-14!57;UBERON:0005068!3.48e-14!57;UBERON:0006241!3.48e-14!57;UBERON:0007135!3.48e-14!57;UBERON:0002780!4.77e-13!41;UBERON:0001890!4.77e-13!41;UBERON:0006240!4.77e-13!41;UBERON:0001017!1.31e-12!82;UBERON:0003080!1.35e-12!42;UBERON:0000073!1.67e-12!94;UBERON:0001016!1.67e-12!94;UBERON:0005743!5.50e-12!86;UBERON:0000955!4.07e-11!69;UBERON:0006238!4.07e-11!69;UBERON:0002616!6.73e-11!59;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0001893!3.14e-10!34;UBERON:0002791!4.52e-10!33;UBERON:0001869!1.55e-09!32;UBERON:0002346!1.21e-08!90;UBERON:0002390!2.08e-08!102;UBERON:0003061!2.08e-08!102;UBERON:0003075!3.54e-08!86;UBERON:0007284!3.54e-08!86;UBERON:0002619!8.99e-08!22;UBERON:0000956!4.60e-07!25;UBERON:0000203!4.60e-07!25;UBERON:0001950!6.41e-07!20;UBERON:0002193!9.84e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.19e-09;41!UBERON:0001890;1.19e-09;41!UBERON:0003528;3.78e-09;34!UBERON:0002020;3.78e-09;34!UBERON:0002791;5.78e-09;32!UBERON:0001893;7.30e-09;34!UBERON:0000073;1.20e-08;53!UBERON:0002616;1.20e-08;53!UBERON:0001869;1.27e-08;32!UBERON:0002619;8.74e-08;22!UBERON:0000956;4.46e-07;25!UBERON:0000203;4.46e-07;25!UBERON:0001950;6.27e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-20,114;UBERON:0001049,1.41e-14,56;UBERON:0005068,1.41e-14,56;UBERON:0006241,1.41e-14,56;UBERON:0007135,1.41e-14,56;UBERON:0000073,1.63e-13,53;UBERON:0002616,1.63e-13,53;UBERON:0001016,2.39e-13,89;UBERON:0002780,4.77e-13,41;UBERON:0001890,4.77e-13,41;UBERON:0003080,4.77e-13,41;UBERON:0006240,4.77e-13,41;UBERON:0001017,7.09e-13,81;UBERON:0000955,2.17e-11,68;UBERON:0006238,2.17e-11,68;UBERON:0003528,1.10e-10,34;UBERON:0002020,1.10e-10,34;UBERON:0001893,3.14e-10,34;UBERON:0002791,6.86e-10,32;UBERON:0001869,1.55e-09,32;UBERON:0002346,1.15e-08,86;UBERON:0002390,1.59e-08,98;UBERON:0003061,1.59e-08,98;UBERON:0003075,3.39e-08,82;UBERON:0007284,3.39e-08,82;UBERON:0002619,8.99e-08,22;UBERON:0000956,4.60e-07,25;UBERON:0000203,4.60e-07,25;UBERON:0001950,6.41e-07,20;UBERON:0002193,8.60e-07,108 | |||
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4521641 | ||
|short_description=p1@PNISR | |short_description=p1@PNISR | ||
}} | }} |
Latest revision as of 06:32, 20 September 2015
Short description: | p1@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNISR_5end |
Coexpression cluster: | C986_cerebellum_CD4_granulocyte_Mast_pineal_non_pituitary |
Association with transcript: | 0bp_to_ENST00000369239, ENST00000478777, ENST00000492294, ENST00000498075_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.11e-27 | 168 |
leukocyte | 7.60e-26 | 136 |
hematopoietic cell | 1.64e-24 | 177 |
hematopoietic oligopotent progenitor cell | 3.18e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 2.94e-19 | 120 |
nongranular leukocyte | 1.09e-18 | 115 |
lymphocyte | 4.98e-17 | 53 |
common lymphoid progenitor | 4.98e-17 | 53 |
lymphoid lineage restricted progenitor cell | 5.11e-17 | 52 |
mature alpha-beta T cell | 8.38e-10 | 18 |
alpha-beta T cell | 8.38e-10 | 18 |
immature T cell | 8.38e-10 | 18 |
mature T cell | 8.38e-10 | 18 |
immature alpha-beta T cell | 8.38e-10 | 18 |
myeloid cell | 2.11e-09 | 108 |
common myeloid progenitor | 2.11e-09 | 108 |
T cell | 5.96e-09 | 25 |
pro-T cell | 5.96e-09 | 25 |
lymphocyte of B lineage | 6.10e-08 | 24 |
pro-B cell | 6.10e-08 | 24 |
B cell | 1.04e-07 | 14 |
myeloid leukocyte | 1.40e-07 | 72 |
CD8-positive, alpha-beta T cell | 4.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-20 | 114 |
neural tube | 1.41e-14 | 56 |
neural rod | 1.41e-14 | 56 |
future spinal cord | 1.41e-14 | 56 |
neural keel | 1.41e-14 | 56 |
regional part of nervous system | 1.63e-13 | 53 |
regional part of brain | 1.63e-13 | 53 |
nervous system | 2.39e-13 | 89 |
regional part of forebrain | 4.77e-13 | 41 |
forebrain | 4.77e-13 | 41 |
anterior neural tube | 4.77e-13 | 41 |
future forebrain | 4.77e-13 | 41 |
central nervous system | 7.09e-13 | 81 |
brain | 2.17e-11 | 68 |
future brain | 2.17e-11 | 68 |
brain grey matter | 1.10e-10 | 34 |
gray matter | 1.10e-10 | 34 |
telencephalon | 3.14e-10 | 34 |
regional part of telencephalon | 6.86e-10 | 32 |
cerebral hemisphere | 1.55e-09 | 32 |
neurectoderm | 1.15e-08 | 86 |
hematopoietic system | 1.59e-08 | 98 |
blood island | 1.59e-08 | 98 |
neural plate | 3.39e-08 | 82 |
presumptive neural plate | 3.39e-08 | 82 |
regional part of cerebral cortex | 8.99e-08 | 22 |
cerebral cortex | 4.60e-07 | 25 |
pallium | 4.60e-07 | 25 |
neocortex | 6.41e-07 | 20 |
hemolymphoid system | 8.60e-07 | 108 |