FFCP PHASE1:Hg19::chr12:7169150..7169183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc009zfs.2_5end | |association_with_transcript=7bp_to_uc009zfs.2_5end | ||
|cluster_id=chr12:7169150..7169183,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_C1S_5end | |description=CAGE_peak_3_at_C1S_5end | ||
|id=chr12:7169150..7169183,+ | |id=chr12:7169150..7169183,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.35e-08!12;CL:0000417!4.35e-08!12;CL:0000668!4.35e-08!12;CL:0000414!4.35e-08!12;CL:0000412!4.35e-08!12;CL:0000182!4.35e-08!12 | |ontology_enrichment_celltype=CL:0000181!4.35e-08!12;CL:0000417!4.35e-08!12;CL:0000668!4.35e-08!12;CL:0000414!4.35e-08!12;CL:0000412!4.35e-08!12;CL:0000182!4.35e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.07e-19;9!CL:0000447;8.07e-19;9!CL:0000135;9.96e-15;3!CL:0000214;9.96e-15;3!CL:0000388;9.96e-15;3!CL:0000182;1.65e-14;12!CL:0000499;5.34e-13;28!CL:0000327;2.13e-11;15!CL:0000138;5.36e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.57e-19,9;CL:0000447,5.57e-19,9;CL:0000214,5.68e-15,3;CL:0000135,9.97e-15,3;CL:0000388,9.97e-15,3;CL:0000182,1.68e-14,12;CL:0000499,4.49e-13,28;CL:0000327,1.71e-11,15;CL:0000058,5.36e-08,6;CL:0000138,5.36e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.13e-11;1!UBERON:0003852;1.13e-11;1!UBERON:0004161;2.86e-09;11!UBERON:0009497;6.40e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.81e-10!19;UBERON:0006925!1.81e-10!19;UBERON:0008836!1.81e-10!19;UBERON:0009854!1.30e-09!23;UBERON:0003929!2.73e-09!54;UBERON:0005057!4.83e-09!26;UBERON:0008835!1.38e-08!22;UBERON:0003894!1.38e-08!22;UBERON:0009497!2.25e-08!25;UBERON:0000015!2.25e-08!25;UBERON:0002423!2.25e-08!25;UBERON:0006235!2.25e-08!25;UBERON:0004161!2.25e-08!25;UBERON:0009856!4.37e-08!26;UBERON:0007499!3.57e-07!25;UBERON:0004457!4.89e-07!12;UBERON:0000042!4.89e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.63e-20;19!UBERON:0006925;6.63e-20;19!UBERON:0002423;4.80e-15;25!UBERON:0007846;9.96e-15;3!UBERON:0006915;9.96e-15;3!UBERON:0007616;9.96e-15;3!UBERON:0000043;9.96e-15;3!UBERON:0007845;9.96e-15;3!UBERON:0002217;9.96e-15;3!UBERON:0002018;9.96e-15;3!UBERON:0002365;4.12e-12;31!UBERON:0002330;4.12e-12;31!UBERON:0001301;1.13e-11;1!UBERON:0005705;1.13e-11;1!UBERON:0008193;1.13e-11;1!UBERON:0010912;1.13e-11;1!UBERON:0002514;1.13e-11;1!UBERON:0003457;1.13e-11;1!UBERON:0008907;1.13e-11;1!UBERON:0008001;1.13e-11;1!UBERON:0007213;1.13e-11;1!UBERON:0009891;1.13e-11;1!UBERON:0007914;1.13e-11;1!UBERON:0007375;1.13e-11;1!UBERON:0003323;1.13e-11;1!UBERON:0010258;1.13e-11;1!UBERON:0005253;1.13e-11;1!UBERON:0007842;1.13e-11;1!UBERON:0002397;1.13e-11;1!UBERON:0003113;1.13e-11;1!UBERON:0003277;1.13e-11;1!UBERON:0001709;1.13e-11;1!UBERON:0002244;1.13e-11;1!UBERON:0005620;1.13e-11;1!UBERON:0010364;1.13e-11;1!UBERON:0004288;1.13e-11;1!UBERON:0002368;1.69e-10;33!UBERON:0000949;1.94e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.75e-20,19;UBERON:0006925,6.75e-20,19;UBERON:0008836,6.75e-20,19;UBERON:0008835,3.87e-17,22;UBERON:0003894,3.87e-17,22;UBERON:0009854,2.23e-16,23;UBERON:0007499,4.87e-15,25;UBERON:0009497,4.87e-15,25;UBERON:0000015,4.87e-15,25;UBERON:0002423,4.87e-15,25;UBERON:0006235,4.87e-15,25;UBERON:0004161,4.87e-15,25;UBERON:0006915,5.68e-15,3;UBERON:0007616,5.68e-15,3;UBERON:0002217,5.68e-15,3;UBERON:0002018,5.68e-15,3;UBERON:0007846,9.97e-15,3;UBERON:0000043,9.97e-15,3;UBERON:0007845,9.97e-15,3;UBERON:0009856,1.91e-14,26;UBERON:0002365,4.70e-12,31;UBERON:0002330,4.70e-12,31;UBERON:0005705,1.63e-11,1;UBERON:0008193,1.63e-11,1;UBERON:0010912,1.63e-11,1;UBERON:0002514,1.63e-11,1;UBERON:0003457,1.63e-11,1;UBERON:0008907,1.63e-11,1;UBERON:0008001,1.63e-11,1;UBERON:0007213,1.63e-11,1;UBERON:0009891,1.63e-11,1;UBERON:0007914,1.63e-11,1;UBERON:0009292,1.63e-11,1;UBERON:0003099,1.63e-11,1;UBERON:0007375,1.63e-11,1;UBERON:0003323,1.63e-11,1;UBERON:0010258,1.63e-11,1;UBERON:0007842,1.63e-11,1;UBERON:0009494,1.63e-11,1;UBERON:0010042,1.63e-11,1;UBERON:0010045,1.63e-11,1;UBERON:0010259,1.63e-11,1;UBERON:0010359,1.63e-11,1;UBERON:0009526,1.63e-11,1;UBERON:0002397,1.63e-11,1;UBERON:0003113,1.63e-11,1;UBERON:0003277,1.63e-11,1;UBERON:0001709,1.63e-11,1;UBERON:0004066,1.63e-11,1;UBERON:0002244,1.63e-11,1;UBERON:0005620,1.63e-11,1;UBERON:0004362,1.63e-11,1;UBERON:0010364,1.63e-11,1;UBERON:0010046,1.63e-11,1;UBERON:0005868,1.63e-11,1;UBERON:0007238,1.63e-11,1;UBERON:0004288,1.63e-11,1;UBERON:0004068,1.63e-11,1;UBERON:0010334,1.63e-11,1;UBERON:0003852,1.63e-11,1;UBERON:0010253,1.63e-11,1;UBERON:0001301,1.81e-11,1;UBERON:0002368,1.25e-10,35;UBERON:0005172,5.71e-09,54;UBERON:0005173,5.71e-09,54;UBERON:0000949,3.58e-08,45;UBERON:0002417,5.29e-08,60;UBERON:0000916,5.29e-08,60;UBERON:0003929,9.80e-07,54 | |||
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|short_description=p3@C1S | |short_description=p3@C1S | ||
}} | }} |
Latest revision as of 16:47, 24 September 2015
Short description: | p3@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1S_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 7bp_to_uc009zfs.2_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.57e-19 | 9 |
carbohydrate secreting cell | 5.57e-19 | 9 |
synovial cell | 5.68e-15 | 3 |
fibrocyte | 9.97e-15 | 3 |
tendon cell | 9.97e-15 | 3 |
hepatocyte | 1.68e-14 | 12 |
stromal cell | 4.49e-13 | 28 |
extracellular matrix secreting cell | 1.71e-11 | 15 |
chondroblast | 5.36e-08 | 6 |
chondrocyte | 5.36e-08 | 6 |